John E. Dueber

8.8k citations

44 papers · 6.4k indexed · 4 hit papers · h-index 32

Impact in

Molecular Biology top 1%
- Microbial Metabolic Engineering and Bioproduction
- CRISPR and Genetic Engineering
- RNA and protein synthesis mechanisms
- Enzyme Catalysis and Immobilization
- Gene Regulatory Network Analysis
- Plant biochemistry and biosynthesis
- Fungal and yeast genetics research
Biotechnology top 0.5%

Papers in ⓘ

Biophysics 4
Aging 1

Co-authors: William C. DeLoache (4 shared papers)Michael E. Lee (4 shared papers)Wendell A. Lim (5 shared papers)Kristala L. J. Prather (2 shared papers)Tae Seok Moon (2 shared papers)Gabriel C. Wu (4 shared papers)Jay D. Keasling (3 shared papers)Bernardo Cervantes (2 shared papers)
Journals: ACS Synthetic Biology (5 papers)Nature Chemical Biology (5 papers)Metabolic Engineering (4 papers)Nature Communications (4 papers)Nature (4 papers)
Partner nations: United States Canada Germany

In The Last Decade

John E. Dueber

44 papers receiving 6.3k citations

Hit Papers

align trajectories log scale

De novo design of bioactive protein switches 2019 · 185 citations

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if any of the following hold:

it has ≥500 total citations;
it reaches ≥1.5× the top-1% citation threshold for papers in the same subfield and year (the threshold is the minimum needed to enter the top 1%, not the average within it);
it reaches the top citation threshold in at least one of its specific research topics.

2019 Nature
2015 ACS Synthetic Biology
2014 Cell
2009 Nature Biotechnology

Peers

Countries citing papers authored by John E. Dueber

Since Specialization

Citations

This map shows the geographic impact of John E. Dueber's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by John E. Dueber with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites John E. Dueber more than expected).

Fields of papers citing papers by John E. Dueber

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by John E. Dueber. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by John E. Dueber. The network helps show where John E. Dueber may publish in the future.

Co-authors

The 25 scholars most cited alongside John E. Dueber, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with John E. Dueber Line = papers co-authored together John E. Dueber links everyone, so they are left out of the graph.

All Works

Sort: Min cites: Since: Top N: Style:

20 of 20 papers shown

Showing the 20 most-cited of 44 papers — load more, or switch the sort, to bring in the rest.

#	Work
1	Synthetic protein scaffolds provide modular control over metabolic flux Nature Biotechnology ·John E. Dueber, Gabriel C. Wu, G. Reza Malmirchegini, Tae Seok Moon, Christopher J. Petzold, Adeeti V Ullal, Kristala L. J. Prather, Jay D. Keasling Hit paper breakdown →	2009	989
2	Engineering Complex Synthetic Transcriptional Programs with CRISPR RNA Scaffolds Cell ·Jesse G. Zalatan, Michael E. Lee, Ricardo Almeida, Luke A. Gilbert, Evan H. Whitehead, Marie La Russa, Jordan C. Tsai, Jonathan S. Weissman, John E. Dueber, Lei S. Qi, Wendell A. Lim Hit paper breakdown →	2014	734
3	A Highly Characterized Yeast Toolkit for Modular, Multipart Assembly ACS Synthetic Biology ·Michael E. Lee, William C. DeLoache, Bernardo Cervantes, John E. Dueber Hit paper breakdown →	2015	599
4	BglBricks: A flexible standard for biological part assembly Journal of Biological Engineering ·J. Christopher Anderson, John E. Dueber, Mariana Leguía, Gabriel C. Wu, Jonathan A. Goler, Adam P. Arkin, Jay D. Keasling	2010	335
5	Selection of chromosomal DNA libraries using a multiplex CRISPR system eLife ·Owen Ryan, Jeffrey M. Skerker, Matthew J. Maurer, Xin Li, Jordan C. Tsai, Snigdha Poddar, Michael E. Lee, Will DeLoache, John E. Dueber, Adam P. Arkin, J.H.D. Cate	2014	287
6	An enzyme-coupled biosensor enables (S)-reticuline production in yeast from glucose Nature Chemical Biology ·William C. DeLoache, Zachary N. Russ, Lauren Narcross, Andrew M Gonzales, Vincent J. J. Martin, John E. Dueber	2015	280
7	CRISPR-guided DNA polymerases enable diversification of all nucleotides in a tunable window Nature ·Shakked O. Halperin, Connor J. Tou, Eric B. Wong, Cyrus Modavi, David V. Schaffer, John E. Dueber	2018	237
8	Use of modular, synthetic scaffolds for improved production of glucaric acid in engineered E. coli Metabolic Engineering ·Tae Seok Moon, John E. Dueber, Eric Shiue, Kristala L. J. Prather	2010	236
9	Reprogramming Control of an Allosteric Signaling Switch Through Modular Recombination Science ·John E. Dueber, Brian J. Yeh, Kayam Chak, Wendell A. Lim	2003	233
10	DNA-guided assembly of biosynthetic pathways promotes improved catalytic efficiency Nucleic Acids Research ·Robert Conrado, Gabriel C. Wu, Jason T. Boock, Hansen Xu, Susan Y. Chen, Tina Lebar, Jernej Turnšek, Nejc Tomšič, Monika Avbelj, Rok Gaber, Tomaž Koprivnjak, Jerneja Mori, Vesna Glavnik, Irena Vovk, Mojca Benčina, Vesna Hodnik, Gregor Anderluh, John E. Dueber, Roman Jerala, Matthew P. DeLisa	2011	221
11	Spatial organization of enzymes for metabolic engineering Metabolic Engineering ·Hanson Lee, William C. DeLoache, John E. Dueber	2011	202
12	De novo design of bioactive protein switches Nature ·Robert A. Langan, Scott E. Boyken, Andrew H. Ng, Jennifer A. Samson, Galen Dods, Alexandra Westbrook, Taylor H. Nguyen, Marc J. Lajoie, Zibo Chen, S. A. Berger, Vikram Khipple Mulligan, John E. Dueber, Walter R. P. Novak, Hana El‐Samad, David Baker Hit paper breakdown →	2019	185
13	Expression-level optimization of a multi-enzyme pathway in the absence of a high-throughput assay Nucleic Acids Research ·Michael E. Lee, Anil Aswani, Audrey S. Han, Claire J. Tomlin, John E. Dueber	2013	174
14	Employing a biochemical protecting group for a sustainable indigo dyeing strategy Nature Chemical Biology ·Tammy M Hsu, Ditte Hededam Welner, Zachary N. Russ, Bernardo Cervantes, Ramya L Prathuri, Paul D. Adams, John E. Dueber	2018	158
15	Towards repurposing the yeast peroxisome for compartmentalizing heterologous metabolic pathways Nature Communications ·William C. DeLoache, Zachary N. Russ, John E. Dueber	2016	157
16	A yeast platform for high-level synthesis of tetrahydroisoquinoline alkaloids Nature Communications ·Michael E. Pyne, Kaspar Kevvai, Parbir S. Grewal, Lauren Narcross, Brian Choi, Leanne Bourgeois, John E. Dueber, Vincent J. J. Martin	2020	117
17	Rewiring cell signaling: the logic and plasticity of eukaryotic protein circuitry Current Opinion in Structural Biology ·John E. Dueber, Brian J. Yeh, Roby P. Bhattacharyya, Wendell A. Lim	2004	108
18	Peroxisome compartmentalization of a toxic enzyme improves alkaloid production Nature Chemical Biology ·Parbir S. Grewal, Jennifer A. Samson, Jordan J. Baker, Brian Choi, John E. Dueber	2020	106
19	Engineering synthetic signaling proteins with ultrasensitive input/output control Nature Biotechnology ·John E. Dueber, Ethan A. Mirsky, Wendell A. Lim	2007	105
20	The pathogen protein EspFU hijacks actin polymerization using mimicry and multivalency Nature ·Nathan A Sallee, Gonzalo M. Rivera, John E. Dueber, Dan Vasilescu, R. Dyche Mullins, Bruce J. Mayer, Wendell A. Lim	2008	91

About John E. Dueber

John E. Dueber is a scholar working on Biophysics, Aging, Molecular Biology, Genetics and Biotechnology, having authored 44 papers that have together received 6.4k indexed citations. Recurring topics across this work include Microbial Metabolic Engineering and Bioproduction (14 papers), RNA and protein synthesis mechanisms (12 papers), CRISPR and Genetic Engineering (9 papers), Bacterial Genetics and Biotechnology (7 papers), Viral Infectious Diseases and Gene Expression in Insects (6 papers), Fungal and yeast genetics research (5 papers), Plant biochemistry and biosynthesis (5 papers) and Biofuel production and bioconversion (5 papers). The work is most often cited by research in Molecular Biology (5.6k citations), Biotechnology (545 citations), Aging (86 citations), Business and International Management (66 citations) and Pharmacology (538 citations). John E. Dueber has collaborated with scholars based in United States, Canada and Germany. Frequent co-authors include William C. DeLoache, Michael E. Lee, Wendell A. Lim, Kristala L. J. Prather, Tae Seok Moon, Gabriel C. Wu, Jay D. Keasling, Bernardo Cervantes, Zachary N. Russ and Christopher J. Petzold. Their work appears in journals such as ACS Synthetic Biology, Nature Chemical Biology, Metabolic Engineering, Nature Communications and Nature.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

Explore authors with similar magnitude of impact