Jiye Shi

19.2k total citations · 6 hit papers
243 papers, 15.3k citations indexed

About

Jiye Shi is a scholar working on Molecular Biology, Biomedical Engineering and Materials Chemistry. According to data from OpenAlex, Jiye Shi has authored 243 papers receiving a total of 15.3k indexed citations (citations by other indexed papers that have themselves been cited), including 195 papers in Molecular Biology, 57 papers in Biomedical Engineering and 47 papers in Materials Chemistry. Recurrent topics in Jiye Shi's work include Advanced biosensing and bioanalysis techniques (109 papers), RNA Interference and Gene Delivery (62 papers) and Protein Structure and Dynamics (42 papers). Jiye Shi is often cited by papers focused on Advanced biosensing and bioanalysis techniques (109 papers), RNA Interference and Gene Delivery (62 papers) and Protein Structure and Dynamics (42 papers). Jiye Shi collaborates with scholars based in China, United Kingdom and United States. Jiye Shi's co-authors include Chunhai Fan, Jiang Li, Lihua Wang, Xiaolei Zuo, Charlotte M. Deane, Tom L. Blundell, Kenji Mizuguchi, Hao Pei, Qian Li and Qing Huang and has published in prestigious journals such as Proceedings of the National Academy of Sciences, Journal of the American Chemical Society and Chemical Society Reviews.

In The Last Decade

Jiye Shi

242 papers receiving 15.1k citations

Hit Papers

5 papers align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

FUGUE: sequence-structure homology recognition using environment-specific substitution tables and structure-dependent gap penalties11Edited by B. Honig

2001 1.0k citations Jiye Shi et al. profile →
Single‐Particle Tracking and Modulation of Cell Entry Pathways of a Tetrahedral DNA Nanostructure in Live Cells

2014 480 citations Jiang Li, Qian Li et al. profile →
Hybridization Chain Reaction Amplification of MicroRNA Detection with a Tetrahedral DNA Nanostructure-Based Electrochemical Biosensor

2014 455 citations Jiye Shi, Chunhai Fan et al. profile →
DNA origami nanostructures can exhibit preferential renal uptake and alleviate acute kidney injury

2018 359 citations Junjun Hou, Jiye Shi et al. profile →
An Exonuclease III‐Powered, On‐Particle Stochastic DNA Walker

2017 348 citations Guangbao Yao, Jie Chao et al. profile →
Advances in the study of berberine and its derivatives: a focus on anti-inflammatory and anti-tumor effects in the digestive system

2016 260 citations Weiliang Zhu, Jiye Shi et al. profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Jiye Shi China	63	11.4k	4.3k	2.8k	1.4k	994	243	15.3k
Young‐Tae Chang Singapore	73	9.8k 0.9×	4.5k 1.0×	6.2k 2.2×	587 0.4×	1.2k 1.2×	436	21.7k
Feng Li China	58	8.7k 0.8×	3.8k 0.9×	1.7k 0.6×	400 0.3×	1.0k 1.0×	326	12.6k
Stephen J. Benkovic United States	84	20.8k 1.8×	2.7k 0.6×	4.4k 1.6×	2.2k 1.5×	1.0k 1.0×	457	28.6k
Jianghong Rao United States	64	6.5k 0.6×	7.8k 1.8×	4.8k 1.7×	1.1k 0.8×	731 0.7×	159	15.0k
Fei Wang China	57	5.9k 0.5×	3.2k 0.7×	1.6k 0.6×	311 0.2×	701 0.7×	378	10.7k
D. Peter Tieleman Canada	80	22.2k 1.9×	4.3k 1.0×	3.4k 1.2×	491 0.3×	854 0.9×	271	29.3k
Horst Vogel Switzerland	65	10.3k 0.9×	2.5k 0.6×	1.1k 0.4×	1.4k 1.0×	1.4k 1.4×	241	14.8k
Richard O’Kennedy Ireland	53	5.8k 0.5×	3.7k 0.9×	695 0.2×	1.7k 1.2×	1.4k 1.4×	277	11.4k
Günter Mayer Germany	48	7.4k 0.6×	2.6k 0.6×	2.6k 0.9×	266 0.2×	751 0.8×	215	10.8k
Mengsu Yang Hong Kong	58	6.1k 0.5×	4.4k 1.0×	1.8k 0.6×	388 0.3×	1.8k 1.8×	359	13.5k

Countries citing papers authored by Jiye Shi

Since Specialization

Citations

This map shows the geographic impact of Jiye Shi's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Jiye Shi with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Jiye Shi more than expected).

Fields of papers citing papers by Jiye Shi

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Jiye Shi. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Jiye Shi. The network helps show where Jiye Shi may publish in the future.

Co-authorship network of co-authors of Jiye Shi

This figure shows the co-authorship network connecting the top 25 collaborators of Jiye Shi. A scholar is included among the top collaborators of Jiye Shi based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Jiye Shi. Jiye Shi is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

Sort: Min cites: Since: Top N: Style:

20 of 20 papers shown

Zhao, Yan, Junjun Hou, Linjie Guo, et al.. (2024). DNA-Engineered Degradable Invisibility Cloaking for Tumor-Targeting Nanoparticles. Journal of the American Chemical Society. 146(36). 25253–25262. 14 indexed citations

Yin, Fangfei, Lingyun Li, Mingqiang Li, et al.. (2024). Twisted DNA Origami-Based Chiral Monolayers for Spin Filtering. Journal of the American Chemical Society. 146(9). 5883–5893. 5 indexed citations

Chen, Jielin, Hui Lv, Yuqing Tang, et al.. (2024). Programming crystallization kinetics of self-assembled DNA crystals with 5-methylcytosine modification. Proceedings of the National Academy of Sciences. 121(11). e2312596121–e2312596121. 6 indexed citations

Yin, Fangfei, Shasha Lu, Juwen Shen, et al.. (2023). DNA-framework-based multidimensional molecular classifiers for cancer diagnosis. Nature Nanotechnology. 18(6). 677–686. 94 indexed citations

Chen, Xiaoliang, Yue Wang, Longjiang Ding, et al.. (2022). Single-Stranded DNA-Encoded Gold Nanoparticle Clusters as Programmable Enzyme Equivalents. Journal of the American Chemical Society. 144(14). 6311–6320. 58 indexed citations

Wang, Jianhua, Yuhui Wei, Ping Zhang, et al.. (2022). Probing Heterogeneous Folding Pathways of DNA Origami Self-Assembly at the Molecular Level with Atomic Force Microscopy. Nano Letters. 22(17). 7173–7179. 12 indexed citations

Morris, Garrett M., et al.. (2021). Investigating the potential for a limited quantum speedup on protein lattice problems. Oxford University Research Archive (ORA) (University of Oxford). 14 indexed citations

Zhang, Chao, Xinxin Jing, Linjie Guo, et al.. (2021). Remote Photothermal Control of DNA Origami Assembly in Cellular Environments. Nano Letters. 21(13). 5834–5841. 32 indexed citations

Zhai, Tingting, Jing Chen, Jiye Shi, et al.. (2021). Water‐Dispersible Gold Nanoclusters: Synthesis Strategies, Optical Properties, and Biological Applications. Chemistry - A European Journal. 28(10). e202103736–e202103736. 21 indexed citations

10.

Pan, Muchen, Jiye Shi, Lihua Wang, Chunhai Fan, & Xiaoguo Liu. (2021). Cryogenic Electron Microscopy for Resolving DNA Nanostructures and Their Complexes. Small Structures. 2(10). 5 indexed citations

11.

Raybould, Matthew I. J., Claire Marks, Konrad Krawczyk, et al.. (2019). Five computational developability guidelines for therapeutic antibody profiling. Proceedings of the National Academy of Sciences. 116(10). 4025–4030. 218 indexed citations

12.

Ma, Wenjuan, Yuxi Zhan, Yuxin Zhang, et al.. (2019). An Intelligent DNA Nanorobot with in Vitro Enhanced Protein Lysosomal Degradation of HER2. Nano Letters. 19(7). 4505–4517. 177 indexed citations

13.

Raybould, Matthew I. J., Claire Marks, Alan P. Lewis, et al.. (2019). Thera-SAbDab: the Therapeutic Structural Antibody Database. Nucleic Acids Research. 48(D1). D383–D388. 108 indexed citations

14.

Zhang, Yinan, Fei Wang, Jie Chao, et al.. (2019). DNA origami cryptography for secure communication. Nature Communications. 10(1). 5469–5469. 110 indexed citations

15.

Zhang, Honglu, Yu Wang, Huan Zhang, et al.. (2019). Programming chain-growth copolymerization of DNA hairpin tiles for in-vitro hierarchical supramolecular organization. Nature Communications. 10(1). 1006–1006. 40 indexed citations

16.

Shi, Ben, Qinglong Yan, Jie Tang, et al.. (2018). Hydrogen Sulfide-Activatable Second Near-Infrared Fluorescent Nanoassemblies for Targeted Photothermal Cancer Therapy. Nano Letters. 18(10). 6411–6416. 177 indexed citations

17.

Sun, Lele, Yanjing Gao, Yaoguang Wang, et al.. (2018). Guiding protein delivery into live cells using DNA-programmed membrane fusion. Chemical Science. 9(27). 5967–5975. 75 indexed citations

18.

Marks, Claire, Jiye Shi, & Charlotte M. Deane. (2017). Predicting loop conformational ensembles. Bioinformatics. 34(6). 949–956. 17 indexed citations

19.

Yu, Yuqi, Jinan Wang, Zhaoqiang Chen, et al.. (2017). Structural insights into HIV-1 protease flap opening processes and key intermediates. RSC Advances. 7(71). 45121–45128. 18 indexed citations

20.

Krawczyk, Konrad, Xiaofeng Liu, Terry Baker, Jiye Shi, & Charlotte M. Deane. (2014). Improving B-cell epitope prediction and its application to global antibody-antigen docking. Bioinformatics. 30(16). 2288–2294. 127 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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