Jinlong Ru

6.1k total citations · 1 hit paper
22 papers, 4.3k citations indexed

About

Jinlong Ru is a scholar working on Molecular Biology, Ecology and Computational Theory and Mathematics. According to data from OpenAlex, Jinlong Ru has authored 22 papers receiving a total of 4.3k indexed citations (citations by other indexed papers that have themselves been cited), including 18 papers in Molecular Biology, 9 papers in Ecology and 5 papers in Computational Theory and Mathematics. Recurrent topics in Jinlong Ru's work include Bacteriophages and microbial interactions (6 papers), Genomics and Phylogenetic Studies (6 papers) and Computational Drug Discovery Methods (5 papers). Jinlong Ru is often cited by papers focused on Bacteriophages and microbial interactions (6 papers), Genomics and Phylogenetic Studies (6 papers) and Computational Drug Discovery Methods (5 papers). Jinlong Ru collaborates with scholars based in Germany, China and United Kingdom. Jinlong Ru's co-authors include Chao Huang, Yonghua Wang, Zihu Guo, Peng Li, Yan Li, Jinan Wang, Wei Zhou, Ling Yang, Pidong Li and Bohui Li and has published in prestigious journals such as Advanced Materials, Nature Communications and Bioinformatics.

In The Last Decade

Jinlong Ru

21 papers receiving 4.3k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

TCMSP: a database of systems pharmacology for drug discovery from herbal medicines

2014 3.5k citations Jinlong Ru, Peng Li et al. Journal of Cheminformatics profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Jinlong Ru Germany	10	2.2k	1.5k	1.0k	919	694	22	4.3k
Bonglee Kim South Korea	39	2.5k 1.1×	480 0.3×	545 0.5×	244 0.3×	545 0.8×	283	5.3k
Chao Huang China	27	3.3k 1.5×	2.2k 1.5×	1.5k 1.5×	1.4k 1.6×	1.1k 1.6×	81	6.2k
Yue Gao China	36	1.9k 0.8×	937 0.6×	620 0.6×	112 0.1×	332 0.5×	235	3.8k
Hong Bai China	19	818 0.4×	392 0.3×	315 0.3×	205 0.2×	211 0.3×	40	2.1k
Haiyu Xu China	26	1.2k 0.5×	789 0.5×	788 0.8×	344 0.4×	298 0.4×	84	2.3k
Sarwat Sultana India	47	2.6k 1.2×	1.6k 1.1×	909 0.9×	82 0.1×	695 1.0×	194	7.5k
Hui‐Jun Li China	35	2.0k 0.9×	731 0.5×	820 0.8×	88 0.1×	348 0.5×	191	3.9k
Peramaiyan Rajendran India	39	2.6k 1.2×	500 0.3×	894 0.9×	87 0.1×	350 0.5×	105	6.1k
Jung Han Yoon Park South Korea	49	3.4k 1.5×	1.2k 0.8×	367 0.4×	96 0.1×	538 0.8×	185	6.5k

Countries citing papers authored by Jinlong Ru

Since Specialization

Citations

This map shows the geographic impact of Jinlong Ru's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Jinlong Ru with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Jinlong Ru more than expected).

Fields of papers citing papers by Jinlong Ru

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Jinlong Ru. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Jinlong Ru. The network helps show where Jinlong Ru may publish in the future.

Co-authorship network of co-authors of Jinlong Ru

This figure shows the co-authorship network connecting the top 25 collaborators of Jinlong Ru. A scholar is included among the top collaborators of Jinlong Ru based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Jinlong Ru. Jinlong Ru is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

Sort: Min cites: Since: Top N: Style:

20 of 20 papers shown

Zhang, Yunsheng, Qiong Pan, Jinlong Ru, et al.. (2025). Single-cell RNA sequencing reveals intrahepatic signature related to pathobiology of duck hepatitis A virus type 3 (DHAV-3) infection. Poultry Science. 104(2). 104798–104798.

Sun, Jianfeng, Quanzhong Liu, Jinlong Ru, et al.. (2025). SVLearn: a dual-reference machine learning approach enables accurate cross-species genotyping of structural variants. Nature Communications. 16(1). 2406–2406. 2 indexed citations

Sun, Jianfeng, Jinlong Ru, Adam P. Cribbs, & Dapeng Xiong. (2025). PyPropel: a Python-based tool for efficiently processing and characterising protein data. BMC Bioinformatics. 26(1). 70–70. 1 indexed citations

Ru, Jinlong, et al.. (2023). Targeted Therapy for EWS-FLI1 in Ewing Sarcoma. Cancers. 15(16). 4035–4035. 8 indexed citations

Ru, Jinlong, et al.. (2023). Unveiling the hidden role of aquatic viruses in hydrocarbon pollution bioremediation. Journal of Hazardous Materials. 459. 132299–132299. 8 indexed citations

Sun, Jianfeng, Jinlong Ru, Anna James-Bott, et al.. (2023). Small molecule-mediated targeting of microRNAs for drug discovery: Experiments, computational techniques, and disease implications. European Journal of Medicinal Chemistry. 257. 115500–115500. 13 indexed citations

Sun, Jianfeng, et al.. (2023). DeepdlncUD: Predicting regulation types of small molecule inhibitors on modulating lncRNA expression by deep learning. Computers in Biology and Medicine. 163. 107226–107226. 3 indexed citations

Sun, Jianfeng, Jinlong Ru, Fei Qi, et al.. (2023). DeepsmirUD: Prediction of Regulatory Effects on microRNA Expression Mediated by Small Molecules Using Deep Learning. International Journal of Molecular Sciences. 24(3). 1878–1878. 6 indexed citations

Ru, Jinlong, et al.. (2023). ViroProfiler: a containerized bioinformatics pipeline for viral metagenomic data analysis. Gut Microbes. 15(1). 8 indexed citations

10.

Sun, Jianfeng, A. Kulandaisamy, Jinlong Ru, M. Michael Gromiha, & Adam P. Cribbs. (2023). TMKit: a Python interface for computational analysis of transmembrane proteins. Briefings in Bioinformatics. 24(5). 1 indexed citations

11.

Ru, Jinlong, et al.. (2023). Gut virome profiling identifies an association between temperate phages and colorectal cancer promoted by Helicobacter pylori infection. Gut Microbes. 15(2). 2257291–2257291. 14 indexed citations

12.

Ma, Ya, Shuangquan Gou, Zhenhua Zhu, et al.. (2023). Transient Mild Photothermia Improves Therapeutic Performance of Oral Nanomedicines with Enhanced Accumulation in the Colitis Mucosa. Advanced Materials. 36(14). e2309516–e2309516. 41 indexed citations

13.

Li, Ruibao, Yiming Jiang, Jinlong Ru, et al.. (2022). Toxic/Bioactive Peptide Synthesis Genes Rearranged by Insertion Sequence Elements Among the Bloom-Forming Cyanobacteria Planktothrix. Frontiers in Microbiology. 13. 901762–901762. 4 indexed citations

14.

Mirzaei, Mohammadali Khan, Jinling Xue, Rita Costa, et al.. (2020). Challenges of Studying the Human Virome – Relevant Emerging Technologies. Trends in Microbiology. 29(2). 171–181. 48 indexed citations

15.

Mirzaei, Mohammadali Khan, Md Anik Ashfaq Khan, Prakash Ghosh, et al.. (2020). Bacteriophages Isolated from Stunted Children Can Regulate Gut Bacterial Communities in an Age-Specific Manner. Cell Host & Microbe. 27(2). 199–212.e5. 92 indexed citations

16.

Jiang, Yiming, Haiying Huang, Tianli Ma, et al.. (2019). Temperature Response of Planktonic Microbiota in Remote Alpine Lakes. Frontiers in Microbiology. 10. 1714–1714. 7 indexed citations

17.

Chen, Yong, Yiming Jiang, Haiying Huang, et al.. (2018). Long-term and high-concentration heavy-metal contamination strongly influences the microbiome and functional genes in Yellow River sediments. The Science of The Total Environment. 637-638. 1400–1412. 296 indexed citations

18.

Zheng, Chunli, Zihu Guo, Chao Huang, et al.. (2015). Large-scale Direct Targeting for Drug Repositioning and Discovery. Scientific Reports. 5(1). 11970–11970. 68 indexed citations

19.

Ru, Jinlong, Peng Li, Jinan Wang, et al.. (2014). TCMSP: a database of systems pharmacology for drug discovery from herbal medicines. Journal of Cheminformatics. 6(1). 13–13. 3527 indexed citations breakdown →

20.

Li, Peng, Yingxue Fu, Jinlong Ru, et al.. (2014). Insights from systems pharmacology into cardiovascular drug discovery and therapy. BMC Systems Biology. 8(1). 141–141. 19 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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