Jesse Stombaugh

56.1k total citations · 9 hit papers
35 papers, 14.1k citations indexed

About

Jesse Stombaugh is a scholar working on Molecular Biology, Ecology and Physiology. According to data from OpenAlex, Jesse Stombaugh has authored 35 papers receiving a total of 14.1k indexed citations (citations by other indexed papers that have themselves been cited), including 35 papers in Molecular Biology, 7 papers in Ecology and 4 papers in Physiology. Recurrent topics in Jesse Stombaugh's work include Gut microbiota and health (14 papers), Genomics and Phylogenetic Studies (12 papers) and RNA and protein synthesis mechanisms (12 papers). Jesse Stombaugh is often cited by papers focused on Gut microbiota and health (14 papers), Genomics and Phylogenetic Studies (12 papers) and RNA and protein synthesis mechanisms (12 papers). Jesse Stombaugh collaborates with scholars based in United States, United Kingdom and France. Jesse Stombaugh's co-authors include Rob Knight, Catherine Lozupone, Jeffrey I. Gordon, Janet Jansson, Dan Knights, Manuel E. Lladser, Ruth E. Ley, Aymé Spor, J. Gregory Caporaso and Justin Kuczynski and has published in prestigious journals such as Nature, Proceedings of the National Academy of Sciences and Nucleic Acids Research.

In The Last Decade

Jesse Stombaugh

35 papers receiving 13.8k citations

Hit Papers

Diversity, stability and resilience of the human gut micr... 2010 2026 2015 2020 2012 2010 2010 2010 2011 1000 2.0k 3.0k

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name h Career Trend Papers Cites
Jesse Stombaugh United States 23 9.6k 2.5k 2.1k 1.9k 1.4k 35 14.1k
Julia K. Goodrich United States 25 9.0k 0.9× 2.6k 1.0× 1.9k 0.9× 1.9k 1.0× 1.4k 1.0× 31 14.3k
Jeremiah J. Faith United States 39 10.1k 1.0× 2.4k 1.0× 2.6k 1.2× 1.5k 0.8× 1.8k 1.2× 74 14.6k
Elizabeth K. Costello United States 30 8.6k 0.9× 1.8k 0.7× 1.9k 0.9× 2.2k 1.1× 1.3k 0.9× 43 13.9k
Brandi L. Cantarel United States 29 11.4k 1.2× 3.0k 1.2× 1.8k 0.9× 1.4k 0.7× 1.9k 1.3× 42 16.5k
Jacques Izard United States 29 11.7k 1.2× 3.3k 1.4× 2.3k 1.1× 2.8k 1.4× 1.9k 1.3× 61 20.7k
Levi Waldron United States 37 13.3k 1.4× 2.7k 1.1× 2.3k 1.1× 2.6k 1.3× 1.8k 1.2× 90 21.7k
Mark Morrison Australia 65 8.4k 0.9× 2.1k 0.9× 1.8k 0.9× 1.3k 0.7× 1.8k 1.2× 281 17.0k
Lawrence A. David United States 30 8.8k 0.9× 3.6k 1.4× 1.7k 0.8× 1.3k 0.6× 1.4k 0.9× 51 12.4k
Les Dethlefsen United States 14 9.8k 1.0× 2.2k 0.9× 3.3k 1.6× 1.4k 0.7× 2.3k 1.6× 18 13.4k
William A. Walters United States 24 11.6k 1.2× 3.3k 1.3× 2.3k 1.1× 4.1k 2.1× 1.8k 1.2× 30 19.8k

Countries citing papers authored by Jesse Stombaugh

Since Specialization
Citations

This map shows the geographic impact of Jesse Stombaugh's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Jesse Stombaugh with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Jesse Stombaugh more than expected).

Fields of papers citing papers by Jesse Stombaugh

Since Specialization
Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Jesse Stombaugh. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Jesse Stombaugh. The network helps show where Jesse Stombaugh may publish in the future.

Co-authorship network of co-authors of Jesse Stombaugh

This figure shows the co-authorship network connecting the top 25 collaborators of Jesse Stombaugh. A scholar is included among the top collaborators of Jesse Stombaugh based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Jesse Stombaugh. Jesse Stombaugh is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

20 of 20 papers shown
1.
Riching, Andrew S., Jesse Stombaugh, Amanda Haupt, et al.. (2022). A Novel CRISPR Interference Effector Enabling Functional Gene Characterization with Synthetic Guide RNAs. The CRISPR Journal. 5(6). 769–786. 9 indexed citations
2.
Tan, Victor M., Jingjing Guo, Hanlin Tao, et al.. (2021). Development and Characterization of a Modular CRISPR and RNA Aptamer Mediated Base Editing System. The CRISPR Journal. 4(1). 58–68. 9 indexed citations
3.
Stombaugh, Jesse, Abel Licon, Žaklina Strezoska, et al.. (2015). The Power Decoder Simulator for the Evaluation of Pooled shRNA Screen Performance. SLAS DISCOVERY. 20(8). 965–975. 2 indexed citations
4.
Lozupone, Catherine, Jesse Stombaugh, Antonio González, et al.. (2013). Meta-analyses of studies of the human microbiota. Genome Research. 23(10). 1704–1714. 311 indexed citations
5.
Semova, Ivana, Juliana Debrito Carten, Jesse Stombaugh, et al.. (2012). Microbiota Regulate Intestinal Absorption and Metabolism of Fatty Acids in the Zebrafish. Cell Host & Microbe. 12(3). 277–288. 674 indexed citations breakdown →
6.
Widmann, Jeremy, Jesse Stombaugh, Daniel McDonald, et al.. (2012). RNASTAR: An RNA STructural Alignment Repository that provides insight into the evolution of natural and artificial RNAs. RNA. 18(7). 1319–1327. 20 indexed citations
7.
Lozupone, Catherine, Jesse Stombaugh, Jeffrey I. Gordon, Janet Jansson, & Rob Knight. (2012). Diversity, stability and resilience of the human gut microbiota. Nature. 489(7415). 220–230. 3892 indexed citations breakdown →
8.
McDonald, Daniel, José C. Clemente, Justin Kuczynski, et al.. (2012). The Biological Observation Matrix (BIOM) format or: how I learned to stop worrying and love the ome-ome. GigaScience. 1(1). 7–7. 590 indexed citations breakdown →
9.
Caporaso, J. Gregory, Christian L. Lauber, Elizabeth K. Costello, et al.. (2011). Moving pictures of the human microbiome. Genome biology. 12(5). R50–R50. 846 indexed citations breakdown →
10.
Ravussin, Yann, Omry Koren, Aymé Spor, et al.. (2011). Responses of Gut Microbiota to Diet Composition and Weight Loss in Lean and Obese Mice. Obesity. 20(4). 738–747. 327 indexed citations
11.
Petrov, Anton I., et al.. (2011). Comprehensive survey and geometric classification of base triples in RNA structures. Nucleic Acids Research. 40(4). 1407–1423. 79 indexed citations
12.
Flores, Gilberto E., Scott T. Bates, Dan Knights, et al.. (2011). Microbial Biogeography of Public Restroom Surfaces. PLoS ONE. 6(11). e28132–e28132. 229 indexed citations
13.
Rocca‐Serra, Philippe, Stanislav Bellaousov, Amanda Birmingham, et al.. (2011). Sharing and archiving nucleic acid structure mapping data. RNA. 17(7). 1204–1212. 24 indexed citations
14.
Zaneveld, Jesse, Laura Wegener Parfrey, Will Van Treuren, et al.. (2011). Combined phylogenetic and genomic approaches for the high-throughput study of microbial habitat adaptation. Trends in Microbiology. 19(10). 472–482. 20 indexed citations
15.
Koren, Omry, Aymé Spor, Frida Fåk, et al.. (2010). Human oral, gut, and plaque microbiota in patients with atherosclerosis. Proceedings of the National Academy of Sciences. 108(supplement_1). 4592–4598. 898 indexed citations breakdown →
16.
Koenig, Jeremy E., Aymé Spor, Ashwana D. Fricker, et al.. (2010). Succession of microbial consortia in the developing infant gut microbiome. Proceedings of the National Academy of Sciences. 108(supplement_1). 4578–4585. 1822 indexed citations breakdown →
17.
Stombaugh, Jesse, Craig L. Zirbel, Éric Westhof, & Neocles B. Leontis. (2009). Frequency and isostericity of RNA base pairs. Nucleic Acids Research. 37(7). 2294–2312. 153 indexed citations
18.
Zirbel, Craig L., Judit E. Šponer, Jiřı́ Šponer, Jesse Stombaugh, & Neocles B. Leontis. (2009). Classification and energetics of the base-phosphate interactions in RNA. Nucleic Acids Research. 37(15). 4898–4918. 133 indexed citations
19.
Zhong, Xuehua, Xiaorong Tao, Jesse Stombaugh, Neocles B. Leontis, & Biao Ding. (2007). Tertiary structure and function of an RNA motif required for plant vascular entry to initiate systemic trafficking. The EMBO Journal. 26(16). 3836–3846. 91 indexed citations
20.
Zirbel, Craig L., et al.. (2007). FR3D: finding local and composite recurrent structural motifs in RNA 3D structures. Journal of Mathematical Biology. 56(1-2). 215–252. 205 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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