Jean‐Stéphane Varré

797 total citations
20 papers, 414 citations indexed

About

Jean‐Stéphane Varré is a scholar working on Molecular Biology, Genetics and Plant Science. According to data from OpenAlex, Jean‐Stéphane Varré has authored 20 papers receiving a total of 414 indexed citations (citations by other indexed papers that have themselves been cited), including 16 papers in Molecular Biology, 8 papers in Genetics and 7 papers in Plant Science. Recurrent topics in Jean‐Stéphane Varré's work include Genomics and Phylogenetic Studies (11 papers), Chromosomal and Genetic Variations (5 papers) and Genome Rearrangement Algorithms (5 papers). Jean‐Stéphane Varré is often cited by papers focused on Genomics and Phylogenetic Studies (11 papers), Chromosomal and Genetic Variations (5 papers) and Genome Rearrangement Algorithms (5 papers). Jean‐Stéphane Varré collaborates with scholars based in France, Germany and Canada. Jean‐Stéphane Varré's co-authors include Hélène Touzet, Pascal Touzet, Aude Darracq, Rayan Chikhi, Pierre Marijon, Laurie Tonon, Fabien Mathy, Sophie Gallina, Pierre Saumitou‐Laprade and Adeline Courseaux and has published in prestigious journals such as Nucleic Acids Research, Bioinformatics and New Phytologist.

In The Last Decade

Jean‐Stéphane Varré

20 papers receiving 408 citations

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name h Career Trend Papers Cites
Jean‐Stéphane Varré France 10 286 111 93 37 32 20 414
Eric T. Dawson United States 6 228 0.8× 105 0.9× 160 1.7× 26 0.7× 39 1.2× 10 370
Maciej Długosz Poland 4 284 1.0× 134 1.2× 96 1.0× 40 1.1× 61 1.9× 4 413
Zhanshan Sam China 6 363 1.3× 80 0.7× 74 0.8× 19 0.5× 70 2.2× 10 518
Masahiro Kasahara Japan 10 323 1.1× 137 1.2× 72 0.8× 20 0.5× 22 0.7× 20 408
Hani Z. Girgis United States 11 364 1.3× 143 1.3× 73 0.8× 30 0.8× 58 1.8× 18 458
José Aguilar-Rodríguez United States 9 363 1.3× 221 2.0× 181 1.9× 30 0.8× 47 1.5× 13 565
Olga K. Kamneva United States 9 397 1.4× 98 0.9× 115 1.2× 58 1.6× 44 1.4× 11 545
Josephine A. Reinhardt United States 8 357 1.2× 165 1.5× 172 1.8× 69 1.9× 111 3.5× 14 544
Melanie Kirsche United States 5 375 1.3× 239 2.2× 221 2.4× 44 1.2× 46 1.4× 5 609

Countries citing papers authored by Jean‐Stéphane Varré

Since Specialization
Citations

This map shows the geographic impact of Jean‐Stéphane Varré's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Jean‐Stéphane Varré with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Jean‐Stéphane Varré more than expected).

Fields of papers citing papers by Jean‐Stéphane Varré

Since Specialization
Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Jean‐Stéphane Varré. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Jean‐Stéphane Varré. The network helps show where Jean‐Stéphane Varré may publish in the future.

Co-authorship network of co-authors of Jean‐Stéphane Varré

This figure shows the co-authorship network connecting the top 25 collaborators of Jean‐Stéphane Varré. A scholar is included among the top collaborators of Jean‐Stéphane Varré based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Jean‐Stéphane Varré. Jean‐Stéphane Varré is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

20 of 20 papers shown
1.
Sloan, Daniel B., Sophie Gallina, Cécile Godé, et al.. (2023). The decoupled evolution of the organellar genomes of Silene nutans leads to distinct roles in the speciation process. New Phytologist. 239(2). 766–777. 6 indexed citations
2.
Poux, Céline, Sophie Gallina, Jean‐Stéphane Varré, et al.. (2022). Reproductive isolation among lineages of Silene nutans (Caryophyllaceae): A potential involvement of plastid-nuclear incompatibilities. Molecular Phylogenetics and Evolution. 169. 107436–107436. 7 indexed citations
3.
Marijon, Pierre, Rayan Chikhi, & Jean‐Stéphane Varré. (2020). yacrd and fpa: upstream tools for long-read genome assembly. Bioinformatics. 36(12). 3894–3896. 52 indexed citations
4.
Varré, Jean‐Stéphane, Nunzio D’Agostino, Pascal Touzet, et al.. (2019). Complete Sequence, Multichromosomal Architecture and Transcriptome Analysis of the Solanum tuberosum Mitochondrial Genome. International Journal of Molecular Sciences. 20(19). 4788–4788. 50 indexed citations
5.
Maurier, Florence, Delphine Beury, Jean‐Stéphane Varré, et al.. (2019). A complete protocol for whole-genome sequencing of virus from clinical samples: Application to coronavirus OC43. Virology. 531. 141–148. 23 indexed citations
6.
Beury, Delphine, Florence Maurier, Ségolène Caboche, et al.. (2019). Use of whole-genome sequencing in the molecular investigation of care-associated HCoV-OC43 infections in a hematopoietic stem cell transplant unit. Journal of Clinical Virology. 122. 104206–104206. 5 indexed citations
7.
Marijon, Pierre, Rayan Chikhi, & Jean‐Stéphane Varré. (2019). Graph analysis of fragmented long-read bacterial genome assemblies. Bioinformatics. 35(21). 4239–4246. 2 indexed citations
8.
Blanquart, Samuel, et al.. (2016). Assisted transcriptome reconstruction and splicing orthology. BMC Genomics. 17(S10). 786–786. 7 indexed citations
9.
Perrin, Amandine, Jean‐Stéphane Varré, Samuel Blanquart, & Aïda Ouangraoua. (2015). ProCARs: Progressive Reconstruction of Ancestral Gene Orders. BMC Genomics. 16(S5). S6–S6. 13 indexed citations
10.
Mathy, Fabien & Jean‐Stéphane Varré. (2013). Retention-error patterns in complex alphanumeric serial-recall tasks. Memory. 21(8). 945–968. 11 indexed citations
11.
Varré, Jean‐Stéphane, et al.. (2011). Genome dedoubling by DCJ and reversal. BMC Bioinformatics. 12(S9). S20–S20. 3 indexed citations
12.
Darracq, Aude, Jean‐Stéphane Varré, Adeline Courseaux, et al.. (2011). Structural and Content Diversity of Mitochondrial Genome in Beet: A Comparative Genomic Analysis. Genome Biology and Evolution. 3. 723–736. 57 indexed citations
13.
Giraud, Mathieu & Jean‐Stéphane Varré. (2010). Parallel Position Weight Matrices algorithms. Parallel Computing. 37(8). 466–478. 2 indexed citations
14.
Tonon, Laurie, Hélène Touzet, & Jean‐Stéphane Varré. (2010). TFM-Explorer: mining cis-regulatory regions in genomes. Nucleic Acids Research. 38(Web Server). W286–W292. 24 indexed citations
15.
Darracq, Aude, Jean‐Stéphane Varré, & Pascal Touzet. (2010). A scenario of mitochondrial genome evolution in maize based on rearrangement events. BMC Genomics. 11(1). 233–233. 37 indexed citations
16.
Varré, Jean‐Stéphane, et al.. (2009). Biomanycores, a repository of interoperable open-source code for many-cores bioinformatics. HAL (Le Centre pour la Communication Scientifique Directe). 1 indexed citations
17.
Giraud, Mathieu & Jean‐Stéphane Varré. (2009). Parallel Position Weight Matrices Algorithms. HAL (Le Centre pour la Communication Scientifique Directe). 7. 65–72. 3 indexed citations
18.
Touzet, Hélène & Jean‐Stéphane Varré. (2007). Efficient and accurate P-value computation for Position Weight Matrices. Algorithms for Molecular Biology. 2(1). 15–15. 96 indexed citations
19.
Varré, Jean‐Stéphane, Jean-Paul Delahaye, & Éric Rivals. (1998). The transformation distance: A dissimilarity measure based an movements of segments.. 13 indexed citations
20.
Varré, Jean‐Stéphane, Jean‐Paul Delahaye, & Éric Rivals. (1997). The Transformation Distance. Proceedings Genome Informatics Workshop/Genome informatics. 8. 352–353. 2 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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