Isseki Yu

1.1k total citations
22 papers, 789 citations indexed

About

Isseki Yu is a scholar working on Molecular Biology, Spectroscopy and Materials Chemistry. According to data from OpenAlex, Isseki Yu has authored 22 papers receiving a total of 789 indexed citations (citations by other indexed papers that have themselves been cited), including 18 papers in Molecular Biology, 6 papers in Spectroscopy and 6 papers in Materials Chemistry. Recurrent topics in Isseki Yu's work include Protein Structure and Dynamics (18 papers), Spectroscopy and Quantum Chemical Studies (5 papers) and Hemoglobin structure and function (4 papers). Isseki Yu is often cited by papers focused on Protein Structure and Dynamics (18 papers), Spectroscopy and Quantum Chemical Studies (5 papers) and Hemoglobin structure and function (4 papers). Isseki Yu collaborates with scholars based in Japan, United States and Germany. Isseki Yu's co-authors include Yuji Sugita, Michael Feig, Po-Hung Wang, Grzegorz Nawrocki, Takaharu Mori, Ryuhei Harada, Masataka Nagaoka, Tadashi Ando, Jaewoon Jung and Koichi Takahashi and has published in prestigious journals such as Nature Communications, The Journal of Physical Chemistry B and Biophysical Journal.

In The Last Decade

Isseki Yu

21 papers receiving 778 citations

Peers

Countries citing papers authored by Isseki Yu

Since Specialization

Citations

This map shows the geographic impact of Isseki Yu's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Isseki Yu with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Isseki Yu more than expected).

Fields of papers citing papers by Isseki Yu

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Isseki Yu. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Isseki Yu. The network helps show where Isseki Yu may publish in the future.

Co-authorship network of co-authors of Isseki Yu

This figure shows the co-authorship network connecting the top 25 collaborators of Isseki Yu. A scholar is included among the top collaborators of Isseki Yu based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Isseki Yu. Isseki Yu is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

#	Work	Indexed citations
1	GENESIS 2.1: High-Performance Molecular Dynamics Software for Enhanced Sampling and Free-Energy Calculations for Atomistic, Coarse-Grained, and Quantum Mechanics/Molecular Mechanics Models 2024 ·The Journal of Physical Chemistry B ·Jaewoon Jung, Kiyoshi Yagi, Cheng Tan, Hiraku Oshima, Takaharu Mori, Isseki Yu, Yasuhiro Matsunaga, Chigusa Kobayashi, Shingo Ito, (unknown), Yuji Sugita	10
2	SPANA: Spatial decomposition analysis for cellular‐scale molecular dynamics simulations 2023 ·Journal of Computational Chemistry ·Isseki Yu, Takaharu Mori, Daisuke Matsuoka, Donatas Surblys, Yuji Sugita	2
3	Reduced efficacy of a Src kinase inhibitor in crowded protein solution 2021 ·Nature Communications ·(unknown), Suyong Re, Grzegorz Nawrocki, Hiraku Oshima, Chiemi Mishima-Tsumagari, (unknown), Mutsuko Kukimoto‐Niino, Isseki Yu, Mikako Shirouzu, Michael Feig, Yuji Sugita	26
4	All-Atom Molecular Dynamics Simulation of the Altered Protein-Protein Interaction with Metabolites and Ions in the Cytoplasm 2020 ·Biophysical Journal ·Isseki Yu, Michael Feig, Yuji Sugita	0
5	Challenges and opportunities in connecting simulations with experiments via molecular dynamics of cellular environments 2018 ·Journal of Physics Conference Series ·Michael Feig, Grzegorz Nawrocki, Isseki Yu, Po-Hung Wang, Yuji Sugita	22
6	High-Performance Data Analysis on the Big Trajectory Data of Cellular Scale All-atom Molecular Dynamics Simulations 2018 ·Journal of Physics Conference Series ·Isseki Yu, Michael Feig, Yuji Sugita	6
7	Slow-Down in Diffusion in Crowded Protein Solutions Correlates with Transient Cluster Formation 2017 ·The Journal of Physical Chemistry B ·Grzegorz Nawrocki, Po-Hung Wang, Isseki Yu, Yuji Sugita, Michael Feig	89
8	Influence of protein crowder size on hydration structure and dynamics in macromolecular crowding 2017 ·Chemical Physics Letters ·Po-Hung Wang, Isseki Yu, Michael Feig, Yuji Sugita	40
9	Crowding in Cellular Environments at an Atomistic Level from Computer Simulations 2017 ·The Journal of Physical Chemistry B ·Michael Feig, Isseki Yu, Po-Hung Wang, Grzegorz Nawrocki, Yuji Sugita	133
10	Molecular Dynamics Simulations of Biomolecules in Cellular Environments 2017 ·Yuji Sugita, Isseki Yu, Michael Feig	2
11	Biomolecular interactions modulate macromolecular structure and dynamics in atomistic model of a bacterial cytoplasm 2016 ·eLife ·Isseki Yu, Takaharu Mori, Tadashi Ando, Ryuhei Harada, Jaewoon Jung, Yuji Sugita, Michael Feig	226
12	Thermodynamics of Macromolecular Association in Heterogeneous Crowding Environments: Theoretical and Simulation Studies with a Simplified Model 2016 ·The Journal of Physical Chemistry B ·Tadashi Ando, Isseki Yu, Michael Feig, Yuji Sugita	24
13	Complete atomistic model of a bacterial cytoplasm for integrating physics, biochemistry, and systems biology 2015 ·Journal of Molecular Graphics and Modelling ·Michael Feig, Ryuhei Harada, Takaharu Mori, Isseki Yu, Koichi Takahashi, Yuji Sugita	59
14	Spatio–Temporal Characteristics of the Transfer Free Energy of Apomyoglobin into the Molecular Crowding Condition with TrimethylamineN-oxide: A Study with Three Types of the Kirkwood–Buff Integral 2012 ·The Journal of Physical Chemistry B ·Isseki Yu, Kyoko Nakada, Masataka Nagaoka	4
15	Influence of Hydrostatic Pressure on Dynamics and Spatial Distribution of Protein Partial Molar Volume: Time-Resolved Surficial Kirkwood-Buff Approach 2010 ·The Journal of Physical Chemistry B ·Isseki Yu, Tomohiro Tasaki, Kyoko Nakada, Masataka Nagaoka	12
16	Carrier Method for the General Evaluation and Control of Pose, Molecular Conformation, Tracking, and the Like 2009 ·Advances in Applied Clifford Algebras ·Eckhard Hitzer, (unknown), Sven Buchholz, Isseki Yu	24
17	Microscopic Understanding of Preferential Exclusion of Compatible Solute Ectoine: Direct Interaction and Hydration Alteration 2007 ·The Journal of Physical Chemistry B ·Isseki Yu, (unknown), Masataka Nagaoka	40
18	Slowdown of water diffusion around protein in aqueous solution with ectoine 2004 ·Chemical Physics Letters ·Isseki Yu, Masataka Nagaoka	42
19	Molecular Modeling of the Solvent Structuring of DMSO around Cellulose Triacetate 2003 ·Bulletin of the Chemical Society of Japan ·Isseki Yu, Kazuyoshi Ueda, Haruo Nakayama	10
20	Molecular Modeling of the Solvent Structuring of Chloroform around Cellulose Triacetate 2003 ·Bulletin of the Chemical Society of Japan ·Isseki Yu, Kazuyuki Iwata, Kazuyoshi Ueda, Haruo Nakayama	7

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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