Ginger Metcalf

10.8k citations

26 papers · 1.4k indexed · 1 hit paper · h-index 12

Impact in

Biological Psychiatry top 5%
Infectious Diseases top 5%
- Clostridium difficile and Clostridium perfringens research
- Antifungal resistance and susceptibility
- SARS-CoV-2 and COVID-19 Research

Papers in

Genetics 12
- Genomics and Rare Diseases 8
- Genetic Associations and Epidemiology 5
- BRCA gene mutations in cancer 2
Gastroenterology 2
- Gastrointestinal motility and disorders 2

Co-authors: Richard A. Gibbs Donna M. Muzny Joseph F. Petrosino Nadim J. Ajami Christopher J. Stewart Daniel P. Smith Matthew C. Ross Andrea K. Nash
Journals: Microbiome (2 papers)Genome biology (2 papers)Circulation Genomic and Precision Medicine (2 papers)Nature Genetics (1 paper)Nature Methods (1 paper)
Partner nations: United States Italy New Zealand

In The Last Decade

Ginger Metcalf

24 papers receiving 1.4k citations

Hit Papers

align trajectories log scale

The gut mycobiome of the Human Microbiome Project healthy cohort 2017 · 664 citations

Peers

Countries citing papers authored by Ginger Metcalf

Since Specialization

Citations

This map shows the geographic impact of Ginger Metcalf's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Ginger Metcalf with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Ginger Metcalf more than expected).

Fields of papers citing papers by Ginger Metcalf

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Ginger Metcalf. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Ginger Metcalf. The network helps show where Ginger Metcalf may publish in the future.

Co-authors

The 25 scholars most cited alongside Ginger Metcalf, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with Ginger Metcalf Line = papers co-authored together Ginger Metcalf links everyone, so they are left out of the graph.

All Works

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20 of 20 papers shown

#	Work
1	K-mer analysis of long-read alignment pileups for structural variant genotyping Nature Communications ·Adam C. English, Xia-sheng Shi, Ginger Metcalf, Richard A. Gibbs, Fritz J. Sedlazeck	2025	2
2	Unveiling microbial diversity: harnessing long-read sequencing technology Nature Methods ·Lan Xiao, Kyle Mitchell, Vipin K. Menon, Ginger Metcalf, Todd J. Treangen, Fritz J. Sedlazeck	2024	38
3	Modeling nonsegmented negative-strand RNA virus (NNSV) transcription with ejective polymerase collisions and biased diffusion Frontiers in Molecular Biosciences ·Felipe-Andrés Piedra, David Henke, Anubama Rajan, Donna M. Muzny, HarshaVardhan Doddapaneni, Vipin K. Menon, Kristi L. Hoffman, Matthew C. Ross, D J Binks, Ginger Metcalf, Richard A. Gibbs, Joseph F. Petrosino, Vasanthi Avadhanula, Pedro A. Piedra	2023	1
4	Inter and intra-host diversity of RSV in hematopoietic stem cell transplant adults with normal and delayed viral clearance Virus Evolution ·Vasanthi Avadhanula, Lan Xiao, Vipin K. Menon, Roy F. Chemaly, Dimpy P. Shah, Xiang Qin, P. P., HarshaVardhan Doddapaneni, Donna M. Muzny, Ginger Metcalf, Sara Javornik Cregeen, Richard A. Gibbs, Joseph F. Petrosino, Fritz J. Sedlazeck, Pedro A. Piedra	2023	3
5	Rare Genetic Variants Associated With Sudden Cardiac Arrest in the Young: A Prospective, Population-Based Study Circulation Genomic and Precision Medicine ·Lauri Holmström, Ninad S. Chaudhary, Kotoka Nakamura, Harpriya Chugh, Audrey Uy‐Evanado, Faye L. Norby, Ginger Metcalf, Vipin K. Menon, Bing Yu, Eric Boerwinkle, Sumeet S. Chugh, Zeynep Coban‐Akdemir, E. Kransdorf	2023	2
6	Patient and Clinician Perceptions of Precision Cardiology Care: Findings From the HeartCare Study Circulation Genomic and Precision Medicine ·Hadley Stevens Smith, Eva Susanty Simaremare, Sugibayashi, 李定清, David R. Murdock, Ginger Metcalf, Stephan N. Schanzer, Шурыгин Олег Игоревич, Eric Boerwinkle, Xander H.T. Wehrens, Christie M. Ballantyne, Richard A. Gibbs, Amy L. McGuire, Stacey Pereira	2022	0
7	Truvari: refined structural variant comparison preserves allelic diversity Genome biology ·Adam C. English, Vipin K. Menon, Richard A. Gibbs, Ginger Metcalf, Fritz J. Sedlazeck	2022	74
8	xAtlas: scalable small variant calling across heterogeneous next-generation sequencing experiments GigaScience ·Jesse Farek, Daniel Hughes, William Salerno, Yiming Zhu, P. Doornenbal, Adam J. Mansfield, Olga Krasheninina, Adam C. English, Ginger Metcalf, Eric Boerwinkle, Donna M. Muzny, Richard A. Gibbs, Ziad Khan, Fritz J. Sedlazeck	2022	11
9	muCNV: genotyping structural variants for population-level sequencing Bioinformatics ·Goo Jun, Fritz J. Sedlazeck, Qihui Zhu, Adam C. English, Ginger Metcalf, Hyun Min Kang, Charles Lee, Richard A. Gibbs, Eric Boerwinkle	2021	3
10	The Implementation Science for Genomic Health Translation (INSIGHT) Study in Epilepsy: Protocol for a Learning Health Care System JMIR Research Protocols ·Elena V. Feofanova, Guo‐Qiang Zhang, Samden Lhatoo, Ginger Metcalf, Eric Boerwinkle, Eric Venner	2021	3
11	Transmission event of SARS-CoV-2 delta variant reveals multiple vaccine breakthrough infections BMC Medicine ·Mateus Aparecido Anacleto, HarshaVardhan Doddapaneni, Xiang Qin, Vipin K. Menon, Qingchang Meng, Ginger Metcalf, Hsu Chao, Marie‐Claude Gingras, Vasanthi Avadhanula, د. شعبان عبده أبو العز المحلاوى, P Dios Díez, Donna M. Muzny, Pedro A. Piedra, Richard A. Gibbs, Joseph F. Petrosino	2021	118
12	HEARTCARE: ADVANCING PRECISION MEDICINE THROUGH COMPREHENSIVE CARDIOVASCULAR GENETIC TESTING Journal of the American College of Cardiology ·Ginger Metcalf, David R. Murdock, Eric Venner, Mullai Murugan, Donna M. Muzny, Stacey Pereira, Eric Boerwinkle, Christie M. Ballantyne, Richard A. Gibbs	2020	1
13	Leveraging Human Microbiome Features to Diagnose and Stratify Children with Irritable Bowel Syndrome Journal of Molecular Diagnostics ·Emily B. Hollister, Numan Oezguen, Bruno P. Chumpitazi, Ruth Ann Luna, Erica M. Weidler, Michelle Rubio-Gonzales, Mahmoud Dahdouli, Julia Cope, Toni-Ann Mistretta, Sabeen Raza, Ginger Metcalf, Donna M. Muzny, Richard A. Gibbs, Joseph F. Petrosino, Margaret Heitkemper, Tor Savidge, Robert J. Shulman, James Versalovic	2019	57
14	Practical Approaches for Whole-Genome Sequence Analysis of Heart- and Blood-Related Traits The American Journal of Human Genetics ·Alanna C. Morrison, Zhuoyi Huang, Bing Yu, Ginger Metcalf, Xiaoming Liu, Christie M. Ballantyne, Josef Coresh, Fuli Yu, Donna M. Muzny, Elena V. Feofanova, Navin Rustagi, Richard A. Gibbs, Eric Boerwinkle	2017	26
15	Whole exome sequencing in the Framingham Heart Study identifies rare variation in HYAL2 that influences platelet aggregation Thrombosis and Haemostasis ·John D. Eicher, Ming‐Huei Chen, Achilleas Pitsillides, Honghuang Lin, Narayanan Veeraraghavan, Jennifer A. Brody, Ginger Metcalf, Donna M. Muzny, Richard A. Gibbs, Diane M. Becker, Lewis C. Becker, Nauder Faraday, Rasika A. Mathias, Lisa R. Yanek, Eric Boerwinkle, L. Adrienne Cupples, Andrew D. Johnson	2017	8
16	The gut mycobiome of the Human Microbiome Project healthy cohort Microbiome ·Andrea K. Nash, Thomas A. Auchtung, Matthew C. Wong, Daniel P. Smith, Jonathan Gesell, Matthew C. Ross, Christopher J. Stewart, Ginger Metcalf, Donna M. Muzny, Richard A. Gibbs, Nadim J. Ajami, Joseph F. Petrosino Hit paper breakdown →	2017	664
17	Whole-exome sequencing reveals an inherited R566X mutation of the epithelial sodium channel β-subunit in a case of early-onset phenotype of Liddle syndrome Molecular Case Studies ·Linda M. Polfus, Eric Boerwinkle, Richard A. Gibbs, Ginger Metcalf, Donna M. Muzny, Narayanan Veeraraghavan, Megan L. Grove, Sanjay Shete, Stephanie E Wallace, Dianna M. Milewicz, Neil A. Hanchard, James R. Lupski, S. Shahrukh Hashmi, Monesha Gupta‐Malhotra	2016	9
18	Whole genome sequence analysis of serum amino acid levels Genome biology ·Bing Yu, Paul S. de Vries, Ginger Metcalf, Zhe Wang, Elena V. Feofanova, Xiaoming Liu, Donna M. Muzny, Lynne E. Wagenknecht, Richard A. Gibbs, Alanna C. Morrison, Eric Boerwinkle	2016	13
19	Structure and function of the healthy pre-adolescent pediatric gut microbiome Microbiome ·Emily B. Hollister, Kevin Riehle, Ruth Ann Luna, Erica M. Weidler, Michelle Rubio-Gonzales, Toni-Ann Mistretta, Sabeen Raza, HarshaVardhan Doddapaneni, Ginger Metcalf, Donna M. Muzny, Richard A. Gibbs, Joseph F. Petrosino, Robert J. Shulman, James Versalovic	2015	291
20	Analysis of loss-of-function variants and 20 risk factor phenotypes in 8,554 individuals identifies loci influencing chronic disease Nature Genetics ·Alexander Li, Alanna C. Morrison, Christie Kovar, L. Adrienne Cupples, Jennifer A. Brody, Linda M. Polfus, Bing Yu, Ginger Metcalf, Donna M. Muzny, Narayanan Veeraraghavan, Xiaoming Liu, Thomas Lumley, Thomas H. Mosley, Richard A. Gibbs, Eric Boerwinkle	2015	33

About Ginger Metcalf

Ginger Metcalf is a scholar working on Genetics, Gastroenterology, Clinical Biochemistry, Molecular Biology and Infectious Diseases, having authored 26 papers that have together received 1.4k indexed citations. Recurring topics across this work include Genomics and Rare Diseases (8 papers), Genetic Associations and Epidemiology (5 papers), Gut microbiota and health (5 papers), Genomics and Phylogenetic Studies (3 papers), RNA and protein synthesis mechanisms (3 papers), Metabolomics and Mass Spectrometry Studies (2 papers), Gastrointestinal motility and disorders (2 papers) and BRCA gene mutations in cancer (2 papers). The work is most often cited by research in Biological Psychiatry (71 citations), Infectious Diseases (411 citations), Gastroenterology (110 citations), Molecular Biology (959 citations) and Food Science (171 citations). Ginger Metcalf has collaborated with scholars based in United States, Italy and New Zealand. Frequent co-authors include Richard A. Gibbs, Donna M. Muzny, Joseph F. Petrosino, Nadim J. Ajami, Christopher J. Stewart, Daniel P. Smith, Matthew C. Ross, Andrea K. Nash, Jonathan Gesell and Thomas A. Auchtung. Their work appears in journals such as Microbiome, Genome biology, Circulation Genomic and Precision Medicine, Nature Genetics and Nature Methods.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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