Emre Özdemir

1.8k total citations · 1 hit paper
21 papers, 1.2k citations indexed

About

Emre Özdemir is a scholar working on Molecular Biology, Genetics and Biomedical Engineering. According to data from OpenAlex, Emre Özdemir has authored 21 papers receiving a total of 1.2k indexed citations (citations by other indexed papers that have themselves been cited), including 16 papers in Molecular Biology, 5 papers in Genetics and 5 papers in Biomedical Engineering. Recurrent topics in Emre Özdemir's work include Microbial Metabolic Engineering and Bioproduction (10 papers), Biofuel production and bioconversion (5 papers) and Enzyme Catalysis and Immobilization (4 papers). Emre Özdemir is often cited by papers focused on Microbial Metabolic Engineering and Bioproduction (10 papers), Biofuel production and bioconversion (5 papers) and Enzyme Catalysis and Immobilization (4 papers). Emre Özdemir collaborates with scholars based in Denmark, United States and Sweden. Emre Özdemir's co-authors include Chad J. Creighton, Mustafa Özen, Michael Ittmann, John D. McKinney, Jens Nielsen, Markus J. Herrgård, Luc Vranckx, Neeraj Dhar, Dirk Bald and Ejvind Mørtz and has published in prestigious journals such as Nature Communications, Oncogene and PLoS Biology.

In The Last Decade

Emre Özdemir

19 papers receiving 1.2k citations

Hit Papers

Widespread deregulation of microRNA expression in human p... 2007 2026 2013 2019 2007 100 200 300 400 500
What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

  1. Widespread deregulation of microRNA expression in human prostate cancer
    2007 547 citations Mustafa Özen, Chad J. Creighton et al. Oncogene profile →

Peers

Emre Özdemir
Xiaoting Zhang China
Hang Zhang China
Alireza Isazadeh Iran
Lubomir V. Nechev United States
Alessia Stornetta United States
Wenjing Chen China
Edna Ayerim Mandujano-Tinoco Mexico
Xiaoting Zhang China
Emre Özdemir
Citations per year, relative to Emre Özdemir Emre Özdemir (= 1×) peers Xiaoting Zhang

Countries citing papers authored by Emre Özdemir

Since Specialization
Citations

This map shows the geographic impact of Emre Özdemir's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Emre Özdemir with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Emre Özdemir more than expected).

Fields of papers citing papers by Emre Özdemir

Since Specialization
Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Emre Özdemir. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Emre Özdemir. The network helps show where Emre Özdemir may publish in the future.

Co-authorship network of co-authors of Emre Özdemir

This figure shows the co-authorship network connecting the top 25 collaborators of Emre Özdemir. A scholar is included among the top collaborators of Emre Özdemir based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Emre Özdemir. Emre Özdemir is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

20 of 20 papers shown
1.
Pieters, Pascal A., Colton J. Lloyd, Adam M. Feist, et al.. (2025). Metabolic growth-coupling strategies for in vivo enzyme selection systems. Metabolic Engineering Communications. 20. e00257–e00257. 2 indexed citations
2.
3.
Özdemir, Emre, et al.. (2025). Characterizing heterologous protein burden in Komagataella phaffii. FEMS Yeast Research. 25. 1 indexed citations
4.
Sudarsan, Suresh, Emre Özdemir, Achraf Ammar, et al.. (2025). Acetol biosynthesis enables NADPH balance during nitrogen limitation in engineered Escherichia coli. Microbial Cell Factories. 24(1). 65–65.
5.
Özdemir, Emre, et al.. (2024). CRISPRi-mediated metabolic switch enables concurrent aerobic and synthetic anaerobic fermentations in engineered consortium. Nature Communications. 15(1). 8985–8985. 4 indexed citations
6.
Yang, Lei, Sailesh Malla, Emre Özdemir, et al.. (2022). Identification and Engineering of Transporters for Efficient Melatonin Production in Escherichia coli. Frontiers in Microbiology. 13. 880847–880847. 7 indexed citations
7.
Phaneuf, Patrick V., Daniel C. Zielinski, James T. Yurkovich, et al.. (2021). Escherichia coli Data-Driven Strain Design Using Aggregated Adaptive Laboratory Evolution Mutational Data. ACS Synthetic Biology. 10(12). 3379–3395. 9 indexed citations
8.
Qin, Jiufu, Anastasia Krivoruchko, Boyang Ji, et al.. (2021). Engineering yeast metabolism for the discovery and production of polyamines and polyamine analogues. Nature Catalysis. 4(6). 498–509. 39 indexed citations
9.
Rajkumar, Arun S., Emre Özdemir, Konstantin Schneider, et al.. (2019). Engineered Reversal of Function in Glycolytic Yeast Promoters. ACS Synthetic Biology. 8(6). 1462–1468. 8 indexed citations
10.
Luo, Hao, Lei Yang, Konstantin Schneider, et al.. (2019). Coupling S-adenosylmethionine–dependent methylation to growth: Design and uses. PLoS Biology. 17(3). e2007050–e2007050. 45 indexed citations
11.
Bosma, Elleke F., Filipe Branco dos Santos, Emre Özdemir, et al.. (2019). A metabolic reconstruction of Lactobacillus reuteri JCM 1112 and analysis of its potential as a cell factory. Microbial Cell Factories. 18(1). 186–186. 28 indexed citations
12.
Jensen, Kristian, Christian Lieven, Moritz E. Beber, et al.. (2018). Cameo: A Python Library for Computer Aided Metabolic Engineering and Optimization of Cell Factories. ACS Synthetic Biology. 7(4). 1163–1166. 49 indexed citations
13.
Rodriguez, Angelica, Yun Chen, Sakda Khoomrung, et al.. (2017). Comparison of the metabolic response to over-production of p-coumaric acid in two yeast strains. Metabolic Engineering. 44. 265–272. 53 indexed citations
14.
Kildegaard, Kanchana Rueksomtawin, Niels Bjerg Jensen, Konstantin Schneider, et al.. (2016). Engineering and systems-level analysis of Saccharomyces cerevisiae for production of 3-hydroxypropionic acid via malonyl-CoA reductase-dependent pathway. Microbial Cell Factories. 15(1). 53–53. 96 indexed citations
15.
Maglica, Željka, Emre Özdemir, & John D. McKinney. (2015). Single-Cell Tracking Reveals Antibiotic-Induced Changes in Mycobacterial Energy Metabolism. mBio. 6(1). 51 indexed citations
16.
Koul, Anil, Luc Vranckx, Neeraj Dhar, et al.. (2014). Delayed bactericidal response of Mycobacterium tuberculosis to bedaquiline involves remodelling of bacterial metabolism. Nature Communications. 5(1). 3369–3369. 206 indexed citations
17.
Özdemir, Emre, et al.. (2009). Discovery of Novel CYP17 Inhibitors for the Treatment of Prostate Cancer with Structure-Based Drug Design. Letters in Drug Design & Discovery. 6(5). 337–344. 8 indexed citations
18.
Özdemir, Emre, et al.. (2008). Classification of drug molecules considering their IC50 values using mixed-integer linear programming based hyper-boxes method. BMC Bioinformatics. 9(1). 411–411. 21 indexed citations
19.
Özen, Mustafa, Chad J. Creighton, Emre Özdemir, & Michael Ittmann. (2007). Widespread deregulation of microRNA expression in human prostate cancer. Oncogene. 27(12). 1788–1793. 547 indexed citations breakdown →
20.
Özdemir, Emre, İbrahim Halil Kavaklı, & Metin Türkay. (2006). Structure-Based Design and Analysis of Cytochrome P450 Inhibitors for the Treatment of Prostate Cancer.. 378–384. 1 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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