David J. Clark

4.5k total citations
84 papers, 3.2k citations indexed

About

David J. Clark is a scholar working on Molecular Biology, Plant Science and Immunology. According to data from OpenAlex, David J. Clark has authored 84 papers receiving a total of 3.2k indexed citations (citations by other indexed papers that have themselves been cited), including 73 papers in Molecular Biology, 24 papers in Plant Science and 3 papers in Immunology. Recurrent topics in David J. Clark's work include Genomics and Chromatin Dynamics (64 papers), RNA and protein synthesis mechanisms (29 papers) and RNA Research and Splicing (25 papers). David J. Clark is often cited by papers focused on Genomics and Chromatin Dynamics (64 papers), RNA and protein synthesis mechanisms (29 papers) and RNA Research and Splicing (25 papers). David J. Clark collaborates with scholars based in United States, United Kingdom and Argentina. David J. Clark's co-authors include Gary Felsenfeld, Vasily M. Studitsky, Răzvan V. Chereji, Alan P. Wolffe, Josefina Ocampo, Peter R. Eriksson, Jeffrey J. Hayes, Hope A. Cole, Bruce H. Howard and Jin Ho Chung and has published in prestigious journals such as Cell, Proceedings of the National Academy of Sciences and Nucleic Acids Research.

In The Last Decade

David J. Clark

81 papers receiving 3.1k citations

Peers

David J. Clark

GENET

IMMUN

Philipp Korber Germany

Rohinton T. Kamakaka United States

Andrew Wu United Kingdom

Andrew Flaus United Kingdom

Wen Tang China

Masako Hasebe Japan

Nigel Roberts United Kingdom

Martin Zofall United States

Ann L. Beyer United States

Philipp Korber Germany

David J. Clark

2.4k ×0.8

526 ×0.9

193 ×0.6

GENET

62 ×0.7

IMMUN

183 ×2.1

Citations per year, relative to David J. Clark David J. Clark (= 1×) peers Philipp Korber

Countries citing papers authored by David J. Clark

Since Specialization

Citations

This map shows the geographic impact of David J. Clark's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by David J. Clark with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites David J. Clark more than expected).

Fields of papers citing papers by David J. Clark

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by David J. Clark. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by David J. Clark. The network helps show where David J. Clark may publish in the future.

Co-authorship network of co-authors of David J. Clark

This figure shows the co-authorship network connecting the top 25 collaborators of David J. Clark. A scholar is included among the top collaborators of David J. Clark based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with David J. Clark. David J. Clark is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

Christina, Mathias, David J. Clark, Fábio Ricardo Marin, et al.. (2025). Sugarcane radiation use efficiency: varietal differences, temperature dependence, and implications for modeling biomass across environments. Agricultural and Forest Meteorology. 375. 110854–110854. 1 indexed citations

Xu, Zhuwei, et al.. (2024). Examining chromatin heterogeneity through PacBio long-read sequencing of M.EcoGII methylated genomes: an m6A detection efficiency and calling bias correcting pipeline. Nucleic Acids Research. 52(9). e45–e45. 7 indexed citations

Williams‐Young, David B., Andrey Asadchev, David J. Clark, et al.. (2023). Distributed memory, GPU accelerated Fock construction for hybrid, Gaussian basis density functional theory. The Journal of Chemical Physics. 158(23). 13 indexed citations

Clark, David J., et al.. (2021). A systematic genome-wide account of binding sites for the model transcription factor Gcn4. Genome Research. 32(2). 367–377. 10 indexed citations

Zhang, Tianyi, Prashant Mishra, Robert L. Walker, et al.. (2020). Skp, Cullin, F-box (SCF)-Met30 and SCF-Cdc4-Mediated Proteolysis of CENP-A Prevents Mislocalization of CENP-A for Chromosomal Stability in Budding Yeast. PLoS Genetics. 16(2). e1008597–e1008597. 26 indexed citations

Chereji, Răzvan V., et al.. (2019). Accessibility of promoter DNA is not the primary determinant of chromatin-mediated gene regulation. Genome Research. 29(12). 1985–1995. 45 indexed citations

Clark, David J., et al.. (2019). A method for assessing histone surface accessibility genome-wide. Methods. 184. 61–69. 2 indexed citations

Rawal, Yashpal, Răzvan V. Chereji, Hongfang Qiu, et al.. (2018). SWI/SNF and RSC cooperate to reposition and evict promoter nucleosomes at highly expressed genes in yeast. Genes & Development. 32(9-10). 695–710. 54 indexed citations

Chereji, Răzvan V. & David J. Clark. (2017). The Universality of Nucleosome Positioning: From Yeast to Human. Biophysical Journal. 112(3). 217a–217a. 1 indexed citations

10.

Chereji, Răzvan V., et al.. (2016). Major Determinants of Nucleosome Organization. Biophysical Journal. 110(3). 68a–68a. 1 indexed citations

11.

Ganguli, Dwaipayan, Răzvan V. Chereji, James Iben, Hope A. Cole, & David J. Clark. (2014). RSC-dependent constructive and destructive interference between opposing arrays of phased nucleosomes in yeast. Genome Research. 24(10). 1637–1649. 66 indexed citations

12.

Cole, Hope A., V. Nagarajavel, & David J. Clark. (2012). Perfect and imperfect nucleosome positioning in yeast. Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms. 1819(7). 639–643. 16 indexed citations

13.

Kim, Yeonjung, et al.. (2006). Activation of Saccharomyces cerevisiae HIS3 Results in Gcn4p-Dependent, SWI/SNF-Dependent Mobilization of Nucleosomes over the Entire Gene. Molecular and Cellular Biology. 26(22). 8607–8622. 49 indexed citations

14.

Clark, David J., et al.. (2003). Role of C‐terminal domain phosphorylation in RNA polymerase II transcription through the nucleosome. Biopolymers. 68(4). 528–538. 11 indexed citations

15.

Smith, Patricia L., et al.. (2003). When smaller is better. 46–49. 1 indexed citations

16.

Felsenfeld, Gary, David J. Clark, & Vasily M. Studitsky. (2000). Transcription through nucleosomes. Biophysical Chemistry. 86(2-3). 231–237. 23 indexed citations

17.

Clark, David J., et al.. (1999). Isolation of minichromosomes from yeast cells. Methods in enzymology on CD-ROM/Methods in enzymology. 304. 35–49. 10 indexed citations

18.

Yenidünya, Ali Fazıl, et al.. (1994). Nucleosome Positioning on Chicken and Human Globin Gene Promoters in Vitro. Journal of Molecular Biology. 237(4). 401–414. 31 indexed citations

19.

Studitsky, Vasily M., David J. Clark, & Gary Felsenfeld. (1994). A histone octamer can step around a transcribing polymerase without leaving the template. Cell. 76(2). 371–382. 201 indexed citations

20.

Almouzni, Geneviève, David J. Clark, Marcel Méchali, & Alan P. Wolffe. (1990). Chromatin assembly on replicating DNAin vitro. Nucleic Acids Research. 18(19). 5767–5774. 89 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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