Daniel Amador‐Noguez

7.0k total citations · 2 hit papers
93 papers, 4.8k citations indexed

About

Daniel Amador‐Noguez is a scholar working on Molecular Biology, Biomedical Engineering and Genetics. According to data from OpenAlex, Daniel Amador‐Noguez has authored 93 papers receiving a total of 4.8k indexed citations (citations by other indexed papers that have themselves been cited), including 79 papers in Molecular Biology, 24 papers in Biomedical Engineering and 11 papers in Genetics. Recurrent topics in Daniel Amador‐Noguez's work include Microbial Metabolic Engineering and Bioproduction (39 papers), Biofuel production and bioconversion (23 papers) and Enzyme Catalysis and Immobilization (13 papers). Daniel Amador‐Noguez is often cited by papers focused on Microbial Metabolic Engineering and Bioproduction (39 papers), Biofuel production and bioconversion (23 papers) and Enzyme Catalysis and Immobilization (13 papers). Daniel Amador‐Noguez collaborates with scholars based in United States, Netherlands and Germany. Daniel Amador‐Noguez's co-authors include Joshua D. Rabinowitz, Federico E. Rey, Eugenio I. Vivas, Kymberleigh A. Romano, David Stevenson, Jing Fan, Amy A. Caudy, Wenyun Lu, Michelle Clasquin and Eugene Melamud and has published in prestigious journals such as Science, Journal of Biological Chemistry and Nature Communications.

In The Last Decade

Daniel Amador‐Noguez

89 papers receiving 4.8k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Intestinal Microbiota Composition Modulates Choline Bioavailability from Diet and Accumulation of the Proatherogenic Metabolite Trimethylamine-N-Oxide

2015 605 citations Daniel Amador‐Noguez, Federico E. Rey et al. mBio profile →
Evidence for an alternative glycolytic pathway in rapidly proliferating cells

2010 509 citations Matthew G. Vander Heiden, Jason W. Locasale et al. Europe PMC (PubMed Central) profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Daniel Amador‐Noguez United States	33	3.5k	768	611	465	424	93	4.8k
Susan Sumner United States	48	2.9k 0.8×	567 0.7×	517 0.8×	979 2.1×	339 0.8×	243	8.3k
Jean‐Charles Portais France	39	3.8k 1.1×	696 0.9×	260 0.4×	260 0.6×	356 0.8×	124	6.5k
Aalim M. Weljie United States	44	4.2k 1.2×	437 0.6×	1.1k 1.8×	867 1.9×	355 0.8×	107	6.5k
Richard Billington United States	34	4.9k 1.4×	679 0.9×	399 0.7×	234 0.5×	544 1.3×	88	8.2k
Borut Štrukelj Slovenia	39	3.5k 1.0×	468 0.6×	472 0.8×	287 0.6×	606 1.4×	158	6.3k
Pierluigi Mauri Italy	48	3.4k 1.0×	490 0.6×	779 1.3×	572 1.2×	492 1.2×	235	8.4k
Sascha Sauer Germany	44	3.7k 1.1×	447 0.6×	383 0.6×	613 1.3×	628 1.5×	119	6.6k
Chang Chen China	40	3.1k 0.9×	260 0.3×	721 1.2×	465 1.0×	280 0.7×	241	6.2k
Julijana Ivanišević Switzerland	32	4.7k 1.3×	539 0.7×	1.0k 1.7×	808 1.7×	329 0.8×	88	7.5k
Christophe Junot France	40	3.4k 1.0×	575 0.7×	548 0.9×	161 0.3×	190 0.4×	125	5.9k

Countries citing papers authored by Daniel Amador‐Noguez

Since Specialization

Citations

This map shows the geographic impact of Daniel Amador‐Noguez's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Daniel Amador‐Noguez with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Daniel Amador‐Noguez more than expected).

Fields of papers citing papers by Daniel Amador‐Noguez

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Daniel Amador‐Noguez. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Daniel Amador‐Noguez. The network helps show where Daniel Amador‐Noguez may publish in the future.

Co-authorship network of co-authors of Daniel Amador‐Noguez

This figure shows the co-authorship network connecting the top 25 collaborators of Daniel Amador‐Noguez. A scholar is included among the top collaborators of Daniel Amador‐Noguez based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Daniel Amador‐Noguez. Daniel Amador‐Noguez is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

Fung, Danny K., Jin Yang, Jeremy W. Schroeder, et al.. (2025). A shared alarmone–GTP switch controls persister formation in bacteria. Nature Microbiology. 10(7). 1617–1629. 1 indexed citations

Stevenson, David, et al.. (2024). The role of Listeria monocytogenes PstA in β-lactam resistance requires the cytochrome bd oxidase activity. Journal of Bacteriology. 206(8). e0013024–e0013024.

Foster, Charles, Satyakam Dash, Saratram Gopalakrishnan, et al.. (2022). Assessing the impact of substrate-level enzyme regulations limiting ethanol titer in Clostridium thermocellum using a core kinetic model. Metabolic Engineering. 69. 286–301. 10 indexed citations

Fung, Danny K., Jin Yang, Xiaoli Xu, et al.. (2022). Metabolic Promiscuity of an Orphan Small Alarmone Hydrolase Facilitates Bacterial Environmental Adaptation. mBio. 13(6). e0242222–e0242222. 6 indexed citations

Morrow, Zachary, Seonyoung Kim, David Stevenson, et al.. (2021). Phagocytes produce prostaglandin E2 in response to cytosolic Listeria monocytogenes. PLoS Pathogens. 17(9). e1009493–e1009493. 4 indexed citations

Hromada, Susan, Yili Qian, Tyler B. Jacobson, et al.. (2021). Negative interactions determine Clostridioides difficile growth in synthetic human gut communities. Molecular Systems Biology. 17(10). e10355–e10355. 30 indexed citations

Jacobson, Tyler B., et al.. (2021). Stepwise genetic engineering of Pseudomonas putida enables robust heterologous production of prodigiosin and glidobactin A. Metabolic Engineering. 67. 112–124. 24 indexed citations

Mead, Matthew E., Mi-Kyung Lee, Donovon A. Adpressa, et al.. (2021). Transcriptomic, Protein-DNA Interaction, and Metabolomic Studies of VosA, VelB, and WetA in Aspergillus nidulans Asexual Spores. mBio. 12(1). 36 indexed citations

Lawson, Christopher E., Rob M. de Graaf, Tyler B. Jacobson, et al.. (2020). Autotrophic and mixotrophic metabolism of an anammox bacterium revealed by in vivo 13C and 2H metabolic network mapping. The ISME Journal. 15(3). 673–687. 98 indexed citations

10.

Yang, Jin, Brent W. Anderson, Asan Turdiev, et al.. (2020). The nucleotide pGpp acts as a third alarmone in Bacillus, with functions distinct from those of (p)ppGpp. Nature Communications. 11(1). 5388–5388. 45 indexed citations

11.

Holwerda, Evert K., Daniel G. Olson, David Stevenson, et al.. (2020). Metabolic and evolutionary responses of Clostridium thermocellum to genetic interventions aimed at improving ethanol production. Biotechnology for Biofuels. 13(1). 45 indexed citations

12.

Linke, Vanessa, Kelsey L. Barrett, Frederick J. Boehm, et al.. (2019). Genetic determinants of gut microbiota composition and bile acid profiles in mice. PLoS Genetics. 15(8). e1008073–e1008073. 81 indexed citations

13.

Dash, Satyakam, Daniel G. Olson, Siu Hung Joshua Chan, et al.. (2019). Thermodynamic analysis of the pathway for ethanol production from cellobiose in Clostridium thermocellum. Metabolic Engineering. 55. 161–169. 37 indexed citations

14.

Hon, Shuen, Martin Pabst, David Stevenson, et al.. (2019). The pentose phosphate pathway of cellulolytic clostridia relies on 6-phosphofructokinase instead of transaldolase. Journal of Biological Chemistry. 295(7). 1867–1878. 24 indexed citations

15.

Park, Junyoung O., Lukas B. Tanner, Monica Wei, et al.. (2019). Near-equilibrium glycolysis supports metabolic homeostasis and energy yield. Nature Chemical Biology. 15(10). 1001–1008. 51 indexed citations

16.

Hamilton, Joshua J., David M. Stevenson, Shaomei He, et al.. (2018). acI Actinobacteria Assemble a Functional Actinorhodopsin with Natively Synthesized Retinal. Applied and Environmental Microbiology. 84(24). 16 indexed citations

17.

Nakanishi, Masako, David Stevenson, Daniel Amador‐Noguez, et al.. (2018). Cyclooxygenase-1 and -2 Play Contrasting Roles in Listeria-Stimulated Immunity. The Journal of Immunology. 200(11). 3729–3738. 10 indexed citations

18.

Rydzak, Thomas, David Stevenson, Dawn M. Klingeman, et al.. (2017). Deletion of Type I glutamine synthetase deregulates nitrogen metabolism and increases ethanol production in Clostridium thermocellum. Metabolic Engineering. 41. 182–191. 28 indexed citations

19.

Heiden, Matthew G. Vander, Jason W. Locasale, Kenneth D. Swanson, et al.. (2010). Evidence for an Alternative Glycolytic Pathway in Rapidly Proliferating Cells. Science. 329(5998). 1492–1499. 31 indexed citations

20.

Heiden, Matthew G. Vander, Jason W. Locasale, Kenneth D. Swanson, et al.. (2010). Evidence for an alternative glycolytic pathway in rapidly proliferating cells. Europe PMC (PubMed Central). 509 indexed citations breakdown →

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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