Chien‐Yu Chen

7.5k total citations · 1 hit paper
198 papers, 5.2k citations indexed

About

Chien‐Yu Chen is a scholar working on Molecular Biology, Electrical and Electronic Engineering and Materials Chemistry. According to data from OpenAlex, Chien‐Yu Chen has authored 198 papers receiving a total of 5.2k indexed citations (citations by other indexed papers that have themselves been cited), including 93 papers in Molecular Biology, 29 papers in Electrical and Electronic Engineering and 19 papers in Materials Chemistry. Recurrent topics in Chien‐Yu Chen's work include Protein Structure and Dynamics (14 papers), Genomics and Phylogenetic Studies (14 papers) and Machine Learning in Bioinformatics (13 papers). Chien‐Yu Chen is often cited by papers focused on Protein Structure and Dynamics (14 papers), Genomics and Phylogenetic Studies (14 papers) and Machine Learning in Bioinformatics (13 papers). Chien‐Yu Chen collaborates with scholars based in Taiwan, United States and China. Chien‐Yu Chen's co-authors include Yu‐Yen Ou, Yen‐Jen Oyang, Chi‐Huey Wong, Tsui-Ling Hsu, Chong‐Jen Yu, Pan‐Chyr Yang, Yi‐Hsiu Juan, Lien‐I Hor, Chu‐Fang Lo and Shih‐Shun Lin and has published in prestigious journals such as Proceedings of the National Academy of Sciences, Journal of the American Chemical Society and Nucleic Acids Research.

In The Last Decade

Chien‐Yu Chen

192 papers receiving 5.2k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

The opportunistic marine pathogen Vibrio parahaemolyticus becomes virulent by acquiring a plasmid that expresses a deadly toxin

2015 467 citations Tzu‐Ping Ko, Yun-Tzu Huang et al. Proceedings of the National Academy of Sciences profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Chien‐Yu Chen Taiwan	34	2.3k	1.1k	715	600	548	198	5.2k
Jia Ye China	33	2.9k 1.2×	434 0.4×	1.4k 1.9×	485 0.8×	110 0.2×	188	7.8k
Jun Ishikawa Japan	45	3.7k 1.6×	1.2k 1.1×	200 0.3×	353 0.6×	51 0.1×	293	9.4k
Chun‐Jung Chen Taiwan	44	2.3k 1.0×	478 0.5×	273 0.4×	522 0.9×	33 0.1×	284	6.5k
Bipin G. Nair India	33	1.7k 0.7×	178 0.2×	779 1.1×	281 0.5×	96 0.2×	248	3.9k
Yuan Jiang China	38	1.7k 0.7×	237 0.2×	653 0.9×	785 1.3×	65 0.1×	231	5.8k
Philip J. Day United Kingdom	45	2.8k 1.2×	777 0.7×	174 0.2×	184 0.3×	58 0.1×	156	6.5k
Taehoon Kim South Korea	16	5.5k 2.4×	321 0.3×	178 0.2×	596 1.0×	60 0.1×	58	7.8k
Liang Zhang China	40	6.2k 2.7×	321 0.3×	587 0.8×	476 0.8×	40 0.1×	220	9.2k
Lan Huang United States	58	8.2k 3.5×	956 0.9×	176 0.2×	471 0.8×	68 0.1×	236	11.2k
Kevin R. Oldenburg United States	17	4.5k 1.9×	561 0.5×	134 0.2×	239 0.4×	63 0.1×	37	7.0k

Countries citing papers authored by Chien‐Yu Chen

Since Specialization

Citations

This map shows the geographic impact of Chien‐Yu Chen's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Chien‐Yu Chen with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Chien‐Yu Chen more than expected).

Fields of papers citing papers by Chien‐Yu Chen

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Chien‐Yu Chen. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Chien‐Yu Chen. The network helps show where Chien‐Yu Chen may publish in the future.

Co-authorship network of co-authors of Chien‐Yu Chen

This figure shows the co-authorship network connecting the top 25 collaborators of Chien‐Yu Chen. A scholar is included among the top collaborators of Chien‐Yu Chen based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Chien‐Yu Chen. Chien‐Yu Chen is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

Sort: Min cites: Since: Top N: Style:

20 of 20 papers shown

Luo, Zhangyi, Chien‐Yu Chen, & Song Li. (2025). Improving Tumor Targeting and Penetration for Nanoparticle‐Mediated Cancer Therapy. Small Methods. 9(8). e2401860–e2401860. 8 indexed citations

Tsai, Cheng‐Hong, et al.. (2025). Annotation-free deep learning for predicting gene mutations from whole slide images of acute myeloid leukemia. npj Precision Oncology. 9(1). 35–35. 2 indexed citations

Huang, Haozhe, Yixian Huang, Beihong Ji, et al.. (2025). Rational development of gemcitabine-based nanoplatform for targeting SERPINB9/Granzyme B axis to overcome chemo-immune-resistance. Nature Communications. 16(1). 4176–4176. 3 indexed citations

Yen, Ting‐Yu, Ching Hsu, Ni‐Chung Lee, et al.. (2024). Signatures of lower respiratory tract microbiome in children with severe community-acquired pneumonia using shotgun metagenomic sequencing. Journal of Microbiology Immunology and Infection. 58(1). 86–93. 3 indexed citations

Li, Peng-Hsuan, et al.. (2024). A large language model framework for literature-based disease–gene association prediction. Briefings in Bioinformatics. 26(1). 2 indexed citations

Hsu, Chia‐Lang, et al.. (2024). Genetic complexity of killer-cell immunoglobulin-like receptor genes in human pangenome assemblies. Genome Research. 34(8). 1211–1223. 3 indexed citations

Luo, Zhangyi, Yixian Huang, Neelu Batra, et al.. (2024). Inhibition of iRhom1 by CD44-targeting nanocarrier for improved cancer immunochemotherapy. Nature Communications. 15(1). 255–255. 30 indexed citations

Liu, Wentao, Chien‐Yu Chen, Shuaifeng Hu, et al.. (2024). An open-cage bis[60]fulleroid as an electron transport material for tin halide perovskite solar cells. Chemical Communications. 60(16). 2172–2175. 6 indexed citations

Hou, Yung‐Te, et al.. (2023). Monitoring Cultured Rat Hepatocytes Using RNA-Seq In Vitro. International Journal of Molecular Sciences. 24(8). 7534–7534. 3 indexed citations

10.

Yang, Chia-Lin, et al.. (2021). ezGeno: an automatic model selection package for genomic data analysis. Bioinformatics. 38(1). 30–37.

11.

Tsai, Cheng‐Hong, Jih‐Luh Tang, Feng‐Ming Tien, et al.. (2021). Clinical implications of sequential MRD monitoring by NGS at 2 time points after chemotherapy in patients with AML. Blood Advances. 5(10). 2456–2466. 38 indexed citations

12.

Ho, Hann‐Jang, et al.. (2020). Detecting Overlapping Communities in Modularity Optimization by Reweighting Vertices. Entropy. 22(8). 819–819. 7 indexed citations

13.

Zang, Bin, Jie Zhao, & Chien‐Yu Chen. (2019). LncRNA PCAT-1 Promoted ESCC Progression via Regulating ANXA10 Expression by Sponging miR-508-3p. SHILAP Revista de lepidopterología. 2 indexed citations

14.

Chen, Chien‐Yu, et al.. (2016). Structure−activity relationship study of novel 2-aminobenzofuran derivatives as P-glycoprotein inhibitors. European Journal of Medicinal Chemistry. 125. 1023–1035. 19 indexed citations

15.

Ko, Tzu‐Ping, Yun-Tzu Huang, Jiun‐Yan Huang, et al.. (2015). The opportunistic marine pathogen Vibrio parahaemolyticus becomes virulent by acquiring a plasmid that expresses a deadly toxin. Proceedings of the National Academy of Sciences. 112(34). 10798–10803. 467 indexed citations breakdown →

16.

Chen, Chien‐Yu & Calvin Yu‐Chian Chen. (2010). Insights into designing the dual-targeted HER2/HSP90 inhibitors. Journal of Molecular Graphics and Modelling. 29(1). 21–31. 60 indexed citations

17.

Liu, Chien-Sheng, et al.. (2010). Design and Experimental Verification of Novel Hydrodynamic Grooved Journal Bearing. 31(2). 139–146. 6 indexed citations

18.

Chen, Chien‐Yu, et al.. (2010). Computational screening and QSAR analysis for design of AMP-activated protein kinase agonist. Journal of the Taiwan Institute of Chemical Engineers. 41(3). 352–359. 15 indexed citations

19.

Liu, Liyu, Chien‐Yu Chen, Ming‐Shian Tsai, et al.. (2009). Statistical identification of gene association by CID in application of constructing ER regulatory network. BMC Bioinformatics. 10(1). 85–85. 9 indexed citations

20.

Oyang, Yen‐Jen, et al.. (2007). Prediction of Protein Secondary Structures with a Novel Kernel Density Estimator.. 79–84. 1 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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