Chakra Chennubhotla

1.9k total citations
32 papers, 1.4k citations indexed

About

Chakra Chennubhotla is a scholar working on Molecular Biology, Materials Chemistry and Artificial Intelligence. According to data from OpenAlex, Chakra Chennubhotla has authored 32 papers receiving a total of 1.4k indexed citations (citations by other indexed papers that have themselves been cited), including 22 papers in Molecular Biology, 8 papers in Materials Chemistry and 5 papers in Artificial Intelligence. Recurrent topics in Chakra Chennubhotla's work include Protein Structure and Dynamics (15 papers), Enzyme Structure and Function (8 papers) and Computational Drug Discovery Methods (4 papers). Chakra Chennubhotla is often cited by papers focused on Protein Structure and Dynamics (15 papers), Enzyme Structure and Function (8 papers) and Computational Drug Discovery Methods (4 papers). Chakra Chennubhotla collaborates with scholars based in United States, Canada and Japan. Chakra Chennubhotla's co-authors include İvet Bahar, Dror Tobi, Lee‐Wei Yang, A.J. Rader, Eran Eyal, Timothy R. Lezon, Zheng Rong Yang, Wenzhi Mao, Ahmet Bakan and Ying Liu and has published in prestigious journals such as Journal of Clinical Oncology, Bioinformatics and Clinical Cancer Research.

In The Last Decade

Chakra Chennubhotla

32 papers receiving 1.4k citations

Peers

Chakra Chennubhotla

CTM

SPECT

Timothy R. Lezon United States

Lars Skjærven Norway

Carlos X. Hernández United States

Jesper Ferkinghoff‐Borg Denmark

Lee‐Wei Yang Taiwan

Nuria Plattner Switzerland

Yilin Meng United States

K. Anton Feenstra Netherlands

Andrew J. Rader United States

M J Harvey United Kingdom

Timothy R. Lezon United States

Chakra Chennubhotla

1.3k ×1.1

334 ×0.9

203 ×0.9

CTM

119 ×0.8

141 ×1.0

SPECT

Citations per year, relative to Chakra Chennubhotla Chakra Chennubhotla (= 1×) peers Timothy R. Lezon

Countries citing papers authored by Chakra Chennubhotla

Since Specialization

Citations

This map shows the geographic impact of Chakra Chennubhotla's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Chakra Chennubhotla with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Chakra Chennubhotla more than expected).

Fields of papers citing papers by Chakra Chennubhotla

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Chakra Chennubhotla. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Chakra Chennubhotla. The network helps show where Chakra Chennubhotla may publish in the future.

Co-authorship network of co-authors of Chakra Chennubhotla

This figure shows the co-authorship network connecting the top 25 collaborators of Chakra Chennubhotla. A scholar is included among the top collaborators of Chakra Chennubhotla based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Chakra Chennubhotla. Chakra Chennubhotla is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

Amatore, F., Shaum Sridharan, Arivarasan Karunamurthy, et al.. (2024). Pathologic response rates to neoadjuvant pembrolizumab in locally advanced (LA) resectable cutaneous squamous cell carcinoma (cSCC).. Journal of Clinical Oncology. 42(16_suppl). 9591–9591. 5 indexed citations

Chennubhotla, Chakra, Andriy Fedorov, Edward D. Helton, et al.. (2017). An Assessment of Imaging Informatics for Precision Medicine in Cancer. Yearbook of Medical Informatics. 26(1). 110–119. 14 indexed citations

Gough, Albert, Andrew M. Stern, John Maier, et al.. (2017). Biologically Relevant Heterogeneity: Metrics and Practical Insights. SLAS DISCOVERY. 22(3). 213–237. 55 indexed citations

Agarwal, Pratul K., Nicolas Doucet, Chakra Chennubhotla, Arvind Ramanathan, & Chitra Narayanan. (2016). Conformational Sub-states and Populations in Enzyme Catalysis. Methods in enzymology on CD-ROM/Methods in enzymology. 578. 273–297. 24 indexed citations

Bakan, Ahmet, Anindita Dutta, Wenzhi Mao, et al.. (2014). Evol and ProDy for bridging protein sequence evolution and structural dynamics. Bioinformatics. 30(18). 2681–2683. 173 indexed citations

Huang, Grace, et al.. (2013). Spectral Clustering Strategies for Heterogeneous Disease Data.. 212–223. 2 indexed citations

Burger, Virginia & Chakra Chennubhotla. (2012). Nhs: Network‐based hierarchical segmentation for cryo‐electron microscopy density maps. Biopolymers. 97(9). 732–741. 4 indexed citations

Burger, Virginia, İvet Bahar, & Chakra Chennubhotla. (2011). Hierarchical Elastic Network Modeling of cryo-EM Data. Biophysical Journal. 100(3). 534a–534a. 2 indexed citations

Chennubhotla, Chakra, Zheng Rong Yang, & İvet Bahar. (2008). Coupling between global dynamics and signal transduction pathways: a mechanism of allostery for chaperonin GroEL. Molecular BioSystems. 4(4). 287–292. 91 indexed citations

10.

Yang, Lee‐Wei, Eran Eyal, Chakra Chennubhotla, et al.. (2007). Insights into Equilibrium Dynamics of Proteins from Comparison of NMR and X-Ray Data with Computational Predictions. Structure. 15(6). 741–749. 112 indexed citations

11.

Chennubhotla, Chakra & İvet Bahar. (2007). Signal Propagation in Proteins and Relation to Equilibrium Fluctuations. PLoS Computational Biology. 3(9). e172–e172. 199 indexed citations

12.

Bahar, İvet, Chakra Chennubhotla, & Burak Erman. (2007). Reply to ‘Comment on elastic network models and proteins’. Physical Biology. 4(1). 64–65. 5 indexed citations

13.

Eyal, Eran, Chakra Chennubhotla, Lee‐Wei Yang, & İvet Bahar. (2007). Anisotropic fluctuations of amino acids in protein structures: insights from X-ray crystallography and elastic network models. Bioinformatics. 23(13). i175–i184. 66 indexed citations

14.

Bahar, İvet, Chakra Chennubhotla, & Dror Tobi. (2007). Intrinsic dynamics of enzymes in the unbound state and relation to allosteric regulation. Current Opinion in Structural Biology. 17(6). 633–640. 256 indexed citations

15.

Farkas, Illés J., et al.. (2006). Topological basis of signal integration in the transcriptional-regulatory network of the yeast, Saccharomyces cerevisiae. BMC Bioinformatics. 7(1). 478–478. 19 indexed citations

16.

Chennubhotla, Chakra, A.J. Rader, Lee‐Wei Yang, & İvet Bahar. (2005). Elastic network models for understanding biomolecular machinery: from enzymes to supramolecular assemblies. Physical Biology. 2(4). S173–S180. 144 indexed citations

17.

Chennubhotla, Chakra & Allan D. Jepson. (2004). Hierarchical Eigensolver for Transition Matrices in Spectral Methods. Neural Information Processing Systems. 17. 273–280. 13 indexed citations

18.

Chennubhotla, Chakra & Allan D. Jepson. (2002). Half-Lives of EigenFlows for Spectral Clustering. Neural Information Processing Systems. 15. 705–712. 11 indexed citations

19.

Jacobs, David W. & Chakra Chennubhotla. (2002). Segmenting independently moving, noisy points. 96–103. 1 indexed citations

20.

Chennubhotla, Chakra & Allan Jepson. (2002). Sparse PCA. Extracting multi-scale structure from data. 1. 641–647. 33 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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