Brent A. Gregersen

4.9k total citations · 2 hit papers
16 papers, 3.6k citations indexed

About

Brent A. Gregersen is a scholar working on Molecular Biology, Organic Chemistry and Atomic and Molecular Physics, and Optics. According to data from OpenAlex, Brent A. Gregersen has authored 16 papers receiving a total of 3.6k indexed citations (citations by other indexed papers that have themselves been cited), including 11 papers in Molecular Biology, 4 papers in Organic Chemistry and 4 papers in Atomic and Molecular Physics, and Optics. Recurrent topics in Brent A. Gregersen's work include DNA and Nucleic Acid Chemistry (9 papers), RNA and protein synthesis mechanisms (5 papers) and Spectroscopy and Quantum Chemical Studies (3 papers). Brent A. Gregersen is often cited by papers focused on DNA and Nucleic Acid Chemistry (9 papers), RNA and protein synthesis mechanisms (5 papers) and Spectroscopy and Quantum Chemical Studies (3 papers). Brent A. Gregersen collaborates with scholars based in United States, Spain and Germany. Brent A. Gregersen's co-authors include David E. Shaw, John L. Klepeis, Ron O. Dror, Yibing Shan, K. J. Bowers, Huafeng Xu, István Kolossváry, Michael P. Eastwood, Federico D. Sacerdoti and John K. Salmon and has published in prestigious journals such as Science, Journal of the American Chemical Society and The Journal of Chemical Physics.

In The Last Decade

Brent A. Gregersen

16 papers receiving 3.6k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Molecular dynamics---Scalable algorithms for molecular dynamics simulations on commodity clusters

2006 1.9k citations K. J. Bowers, Federico D. Sacerdoti et al. profile →
Scalable Algorithms for Molecular Dynamics Simulations on Commodity Clusters

2006 1.2k citations K. J. Bowers, Huafeng Xu et al. profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Brent A. Gregersen United States	14	2.1k	827	712	381	317	16	3.6k
István Kolossváry Hungary	19	2.2k 1.0×	943 1.1×	806 1.1×	439 1.2×	367 1.2×	40	4.1k
Jennifer L. Knight United States	16	2.2k 1.1×	878 1.1×	682 1.0×	501 1.3×	260 0.8×	23	3.5k
Dmitry Lupyan United States	12	1.9k 0.9×	723 0.9×	569 0.8×	403 1.1×	241 0.8×	14	3.0k
Joseph W. Kaus United States	8	1.6k 0.8×	745 0.9×	586 0.8×	348 0.9×	235 0.7×	8	2.7k
Federico D. Sacerdoti United States	7	1.8k 0.9×	824 1.0×	572 0.8×	294 0.8×	304 1.0×	8	3.3k
Mark A. Moraes United States	6	1.8k 0.8×	827 1.0×	552 0.8×	297 0.8×	297 0.9×	7	3.3k
Chaya S. Rapp United States	12	2.0k 0.9×	623 0.8×	378 0.5×	471 1.2×	265 0.8×	14	2.8k
Goran Krilov United States	19	2.1k 1.0×	948 1.1×	771 1.1×	489 1.3×	285 0.9×	38	3.9k
David S. Cerutti United States	16	2.3k 1.1×	820 1.0×	656 0.9×	681 1.8×	267 0.8×	28	3.7k
Michel A. Cuendet Switzerland	22	2.1k 1.0×	639 0.8×	577 0.8×	490 1.3×	340 1.1×	54	4.0k

Countries citing papers authored by Brent A. Gregersen

Since Specialization

Citations

This map shows the geographic impact of Brent A. Gregersen's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Brent A. Gregersen with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Brent A. Gregersen more than expected).

Fields of papers citing papers by Brent A. Gregersen

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Brent A. Gregersen. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Brent A. Gregersen. The network helps show where Brent A. Gregersen may publish in the future.

Co-authorship network of co-authors of Brent A. Gregersen

This figure shows the co-authorship network connecting the top 25 collaborators of Brent A. Gregersen. A scholar is included among the top collaborators of Brent A. Gregersen based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Brent A. Gregersen. Brent A. Gregersen is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

Sort: Min cites: Since: Top N: Style:

16 of 16 papers shown

1.

Donchev, Alexander, Andrew G. Taube, Cory Hargus, et al.. (2021). Quantum chemical benchmark databases of gold-standard dimer interaction energies. Scientific Data. 8(1). 55–55. 69 indexed citations

2.

Arkin, Isaiah T., Huafeng Xu, Morten Ø. Jensen, et al.. (2007). Mechanism of Na ⁺ /H ⁺ Antiporting. Science. 317(5839). 799–803. 124 indexed citations

3.

Giese, Timothy J., Brent A. Gregersen, Yun Liu, et al.. (2006). QCRNA 1.0: A database of quantum calculations for RNA catalysis. Journal of Molecular Graphics and Modelling. 25(4). 423–433. 25 indexed citations

4.

Bowers, K. J., Federico D. Sacerdoti, John K. Salmon, et al.. (2006). Molecular dynamics---Scalable algorithms for molecular dynamics simulations on commodity clusters. 84–84. 1925 indexed citations breakdown →

5.

Liu, Yun, Brent A. Gregersen, Alvan C. Hengge, & Darrin M. York. (2006). Transesterification Thio Effects of Phosphate Diesters: Free Energy Barriers and Kinetic and Equilibrium Isotope Effects from Density-Functional Theory. Biochemistry. 45(33). 10043–10053. 54 indexed citations

6.

Bowers, K. J., Huafeng Xu, Ron O. Dror, et al.. (2006). Scalable Algorithms for Molecular Dynamics Simulations on Commodity Clusters. 43–43. 1182 indexed citations breakdown →

7.

Gregersen, Brent A. & Darrin M. York. (2005). A charge‐scaling implementation of the variational electrostatic projection method. Journal of Computational Chemistry. 27(1). 103–115. 7 indexed citations

8.

Gregersen, Brent A., Jana Khandogin, Walter Thiel, & Darrin M. York. (2005). Smooth Solvation Method for d-Orbital Semiempirical Calculations of Biological Reactions. 2. Application to Transphosphorylation Thio Effects in Solution. The Journal of Physical Chemistry B. 109(19). 9810–9817. 14 indexed citations

9.

Khandogin, Jana, Brent A. Gregersen, Walter Thiel, & Darrin M. York. (2005). Smooth Solvation Method for d-Orbital Semiempirical Calculations of Biological Reactions. 1. Implementation. The Journal of Physical Chemistry B. 109(19). 9799–9809. 23 indexed citations

10.

Gregersen, Brent A. & Darrin M. York. (2005). High-order discretization schemes for biochemical applications of boundary element solvation and variational electrostatic projection methods. The Journal of Chemical Physics. 122(19). 194110–194110. 14 indexed citations

11.

Liu, Yun, Brent A. Gregersen, Xabier López, & Darrin M. York. (2005). Density Functional Study of the In-Line Mechanism of Methanolysis of Cyclic Phosphate and Thiophosphate Esters in Solution: Insight into Thio Effects in RNA Transesterification. The Journal of Physical Chemistry B. 109(42). 19987–20003. 27 indexed citations

12.

López, Carlos Silva, Olalla Nieto Faza, Brent A. Gregersen, et al.. (2004). Pseudorotation of Natural and Chemically Modified Biological Phosphoranes: Implications for RNA Catalysis. ChemPhysChem. 5(7). 1045–1049. 32 indexed citations

13.

López, Carlos Silva, Olalla Nieto Faza, Brent A. Gregersen, et al.. (2004). Pseudorotation of Natural and Chemically Modified Biological Phosphoranes: Implications for RNA Catalysis. ChemPhysChem. 5(9). 1266–1266. 1 indexed citations

14.

Gregersen, Brent A. & Darrin M. York. (2004). Variational Electrostatic Projection (VEP) Methods for Efficient Modeling of the Macromolecular Electrostatic and Solvation Environment in Activated Dynamics Simulations. The Journal of Physical Chemistry B. 109(1). 536–556. 19 indexed citations

15.

Gregersen, Brent A., Xabier López, & Darrin M. York. (2004). Hybrid QM/MM Study of Thio Effects in Transphosphorylation Reactions: The Role of Solvation. Journal of the American Chemical Society. 126(24). 7504–7513. 50 indexed citations

16.

Gregersen, Brent A., Xabier López, & Darrin M. York. (2003). Hybrid QM/MM Study of Thio Effects in Transphosphorylation Reactions. Journal of the American Chemical Society. 125(24). 7178–7179. 70 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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