Boris E. Shakhnovich

902 total citations
21 papers, 686 citations indexed

About

Boris E. Shakhnovich is a scholar working on Molecular Biology, Genetics and Pharmacology. According to data from OpenAlex, Boris E. Shakhnovich has authored 21 papers receiving a total of 686 indexed citations (citations by other indexed papers that have themselves been cited), including 20 papers in Molecular Biology, 4 papers in Genetics and 1 paper in Pharmacology. Recurrent topics in Boris E. Shakhnovich's work include Bioinformatics and Genomic Networks (13 papers), Protein Structure and Dynamics (11 papers) and Genomics and Phylogenetic Studies (8 papers). Boris E. Shakhnovich is often cited by papers focused on Bioinformatics and Genomic Networks (13 papers), Protein Structure and Dynamics (11 papers) and Genomics and Phylogenetic Studies (8 papers). Boris E. Shakhnovich collaborates with scholars based in United States, Italy and India. Boris E. Shakhnovich's co-authors include Eugene I. Shakhnovich, Nikolay V. Dokholyan, Charles DeLisi, Jeremy L. England, David B. Lukatsky, Julian Mintseris, Eugene V. Koonin, Eric J. Deeds, Gilad Lerman and Guido Tiana and has published in prestigious journals such as Proceedings of the National Academy of Sciences, Nucleic Acids Research and Bioinformatics.

In The Last Decade

Boris E. Shakhnovich

20 papers receiving 667 citations

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name h Career Trend Papers Cites
Boris E. Shakhnovich United States 14 629 149 142 28 23 21 686
Vy Nguyen United States 9 337 0.5× 113 0.8× 86 0.6× 26 0.9× 24 1.0× 13 469
Lauren L. Porter United States 16 633 1.0× 265 1.8× 72 0.5× 45 1.6× 55 2.4× 28 742
Sara Light Sweden 15 823 1.3× 68 0.5× 164 1.2× 50 1.8× 25 1.1× 16 953
Chantal Prévost France 18 722 1.1× 139 0.9× 122 0.9× 68 2.4× 28 1.2× 60 812
Kirill B. Gromadski Germany 13 1000 1.6× 52 0.3× 273 1.9× 5 0.2× 15 0.7× 13 1.1k
Guilhem Chalancon United Kingdom 8 932 1.5× 65 0.4× 86 0.6× 8 0.3× 33 1.4× 10 1.0k
Ioannis Filippis United Kingdom 10 313 0.5× 59 0.4× 68 0.5× 46 1.6× 17 0.7× 12 381
Joana Pereira Germany 11 445 0.7× 174 1.2× 46 0.3× 44 1.6× 32 1.4× 25 560
Tamotsu Noguchi Japan 12 533 0.8× 156 1.0× 44 0.3× 43 1.5× 36 1.6× 29 600
Giovanni Pinamonti Italy 6 511 0.8× 62 0.4× 30 0.2× 20 0.7× 24 1.0× 8 571

Countries citing papers authored by Boris E. Shakhnovich

Since Specialization
Citations

This map shows the geographic impact of Boris E. Shakhnovich's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Boris E. Shakhnovich with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Boris E. Shakhnovich more than expected).

Fields of papers citing papers by Boris E. Shakhnovich

Since Specialization
Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Boris E. Shakhnovich. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Boris E. Shakhnovich. The network helps show where Boris E. Shakhnovich may publish in the future.

Co-authorship network of co-authors of Boris E. Shakhnovich

This figure shows the co-authorship network connecting the top 25 collaborators of Boris E. Shakhnovich. A scholar is included among the top collaborators of Boris E. Shakhnovich based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Boris E. Shakhnovich. Boris E. Shakhnovich is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

20 of 20 papers shown
1.
Dokholyan, Nikolay V., et al.. (2020). Imprint of evolution on protein structures. UNC Libraries.
2.
Shakhnovich, Boris E. & Eugene I. Shakhnovich. (2008). Improvisation in evolution of genes and genomes: whose structure is it anyway?. Current Opinion in Structural Biology. 18(3). 375–381. 3 indexed citations
3.
Reddy, Timothy E., Charles DeLisi, & Boris E. Shakhnovich. (2007). Binding Site Graphs: A New Graph Theoretical Framework for Prediction of Transcription Factor Binding Sites. PLoS Computational Biology. 3(5). e90–e90. 15 indexed citations
4.
Zeldovich, Konstantin B., Peiqiu Chen, Boris E. Shakhnovich, & Eugene I. Shakhnovich. (2007). A First-Principles Model of Early Evolution: Emergence of Gene Families, Species, and Preferred Protein Folds. PLoS Computational Biology. 3(7). e139–e139. 47 indexed citations
5.
Reddy, Timothy E., Boris E. Shakhnovich, Daniel S. Roberts, Shelley J. Russek, & Charles DeLisi. (2007). Positional clustering improves computational binding site detection and identifies novel cis -regulatory sites in mammalian GABA A receptor subunit genes. Nucleic Acids Research. 35(3). e20–e20. 5 indexed citations
6.
Lerman, Gilad & Boris E. Shakhnovich. (2007). Defining functional distance using manifold embeddings of gene ontology annotations. Proceedings of the National Academy of Sciences. 104(27). 11334–11339. 29 indexed citations
7.
Shakhnovich, Boris E. & Eugene V. Koonin. (2006). Origins and impact of constraints in evolution of gene families. Genome Research. 16(12). 1529–1536. 44 indexed citations
8.
Lukatsky, David B., Boris E. Shakhnovich, Julian Mintseris, & Eugene I. Shakhnovich. (2006). Structural Similarity Enhances Interaction Propensity of Proteins. Journal of Molecular Biology. 365(5). 1596–1606. 93 indexed citations
9.
Shakhnovich, Boris E.. (2006). Relative contributions of structural designability and functional diversity in molecular evolution of duplicates. Bioinformatics. 22(14). e440–e445. 7 indexed citations
10.
Shakhnovich, Boris E., Eric J. Deeds, Charles DeLisi, & Eugene I. Shakhnovich. (2005). Protein structure and evolutionary history determine sequence space topology. Genome Research. 15(3). 385–392. 67 indexed citations
11.
Shakhnovich, Boris E.. (2005). Improving the Precision of the Structure–Function Relationship by Considering Phylogenetic Context. PLoS Computational Biology. 1(1). e9–e9. 16 indexed citations
12.
Reddy, Timothy E., Charles DeLisi, & Boris E. Shakhnovich. (2005). Assessing transcription factor motif drift from noisy decoy sequences.. PubMed. 16(1). 59–67. 3 indexed citations
13.
Tiana, Guido, Boris E. Shakhnovich, Nikolay V. Dokholyan, & Eugene I. Shakhnovich. (2004). Imprint of evolution on protein structures. Proceedings of the National Academy of Sciences. 101(9). 2846–2851. 47 indexed citations
14.
Shakhnovich, Boris E., Timothy E. Reddy, Kevin Galinsky, Joseph Mellor, & Charles DeLisi. (2004). Comparisons of predicted genetic modules: identification of co-expressed genes through module gene flow.. PubMed. 15(1). 221–8. 6 indexed citations
15.
Shakhnovich, Boris E., et al.. (2004). Quantifying Structure–Function Uncertainty: A Graph Theoretical Exploration into the Origins and Limitations of Protein Annotation. Journal of Molecular Biology. 337(4). 933–949. 14 indexed citations
16.
Deeds, Eric J., Boris E. Shakhnovich, & Eugene I. Shakhnovich. (2004). Proteomic Traces of Speciation. Journal of Molecular Biology. 336(3). 695–706. 15 indexed citations
17.
Shakhnovich, Boris E., et al.. (2004). ELISA: a unified, multidimensional view of the protein domain universe.. PubMed. 15(1). 213–20. 1 indexed citations
18.
Shakhnovich, Boris E., Nikolay V. Dokholyan, Charles DeLisi, & Eugene I. Shakhnovich. (2003). Functional Fingerprints of Folds: Evidence for Correlated Structure–Function Evolution. Journal of Molecular Biology. 326(1). 1–9. 45 indexed citations
19.
Shakhnovich, Boris E., et al.. (2003). ELISA: Structure-Function Inferences based on statistically significant and evolutionarily inspired observations. BMC Bioinformatics. 4(1). 34–34. 14 indexed citations
20.
Dokholyan, Nikolay V., Boris E. Shakhnovich, & Eugene I. Shakhnovich. (2002). Expanding protein universe and its origin from the biological Big Bang. Proceedings of the National Academy of Sciences. 99(22). 14132–14136. 142 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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