Bjarne Knudsen

2.9k total citations
29 papers, 1.6k citations indexed

About

Bjarne Knudsen is a scholar working on Molecular Biology, Genetics and Nutrition and Dietetics. According to data from OpenAlex, Bjarne Knudsen has authored 29 papers receiving a total of 1.6k indexed citations (citations by other indexed papers that have themselves been cited), including 25 papers in Molecular Biology, 7 papers in Genetics and 3 papers in Nutrition and Dietetics. Recurrent topics in Bjarne Knudsen's work include Genomics and Phylogenetic Studies (12 papers), RNA and protein synthesis mechanisms (11 papers) and RNA modifications and cancer (8 papers). Bjarne Knudsen is often cited by papers focused on Genomics and Phylogenetic Studies (12 papers), RNA and protein synthesis mechanisms (11 papers) and RNA modifications and cancer (8 papers). Bjarne Knudsen collaborates with scholars based in Denmark, United States and United Kingdom. Bjarne Knudsen's co-authors include Jotun Hein, Michael M. Miyamoto, Jørgen Kjems, Ebbe Sloth Andersen, Christian Kroun Damgaard, Jan Gorodkin, Torben F. Ørntoft, Karina D. Sørensen, Mette K. Lund and Karin Birkenkamp‐Demtröder and has published in prestigious journals such as Proceedings of the National Academy of Sciences, Nucleic Acids Research and Journal of Biological Chemistry.

In The Last Decade

Bjarne Knudsen

29 papers receiving 1.5k citations

Peers

Bjarne Knudsen

GENET

ECOLO

Chiou‐Hwa Yuh Taiwan

Marco Blanchette United States

Craig A. Smibert Canada

Shale Dames United States

Sean Thomas United States

Kathryn F. Smith United Kingdom

Esther G. L. Koh Singapore

Paul Ajuh United Kingdom

Ana Rita Grosso Portugal

Premal Shah United States

Chiou‐Hwa Yuh Taiwan

Bjarne Knudsen

1.6k ×1.3

303 ×1.3

GENET

314 ×1.8

81 ×0.5

ECOLO

112 ×0.9

Citations per year, relative to Bjarne Knudsen Bjarne Knudsen (= 1×) peers Chiou‐Hwa Yuh

Countries citing papers authored by Bjarne Knudsen

Since Specialization

Citations

This map shows the geographic impact of Bjarne Knudsen's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Bjarne Knudsen with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Bjarne Knudsen more than expected).

Fields of papers citing papers by Bjarne Knudsen

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Bjarne Knudsen. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Bjarne Knudsen. The network helps show where Bjarne Knudsen may publish in the future.

Co-authorship network of co-authors of Bjarne Knudsen

This figure shows the co-authorship network connecting the top 25 collaborators of Bjarne Knudsen. A scholar is included among the top collaborators of Bjarne Knudsen based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Bjarne Knudsen. Bjarne Knudsen is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

Alexeyenko, Andrey, Björn Nystedt, Francesco Vezzi, et al.. (2014). Efficient de novo assembly of large and complex genomes by massively parallel sequencing of Fosmid pools. BMC Genomics. 15(1). 439–439. 7 indexed citations

Hedegaard, Jakob, Kasper Thorsen, Mette K. Lund, et al.. (2014). Next-Generation Sequencing of RNA and DNA Isolated from Paired Fresh-Frozen and Formalin-Fixed Paraffin-Embedded Samples of Human Cancer and Normal Tissue. PLoS ONE. 9(5). e98187–e98187. 267 indexed citations

Knudsen, Bjarne, et al.. (2013). Characterising RNA secondary structure space using information entropy. BMC Bioinformatics. 14(S2). S22–S22. 7 indexed citations

Henkel, Christiaan V., Ron P. Dirks, Yuki Minegishi, et al.. (2012). First draft genome sequence of the Japanese eel, Anguilla japonica. Gene. 511(2). 195–201. 85 indexed citations

Knudsen, Bjarne, et al.. (2012). PPfold 3.0: fast RNA secondary structure prediction using phylogeny and auxiliary data. 3. 16 indexed citations

Knudsen, Bjarne, et al.. (2011). Multithreaded comparative RNA secondary structure prediction using stochastic context-free grammars. BMC Bioinformatics. 12(1). 103–103. 22 indexed citations

Andersen, Ebbe Sloth, Allan Lind-Thomsen, Bjarne Knudsen, et al.. (2007). Semiautomated improvement of RNA alignments. RNA. 13(11). 1850–1859. 30 indexed citations

Andersen, Félicie F., Bjarne Knudsen, Cristiano L. P. Oliveira, et al.. (2007). Assembly and structural analysis of a covalently closed nano-scale DNA cage. Nucleic Acids Research. 36(4). 1113–1119. 99 indexed citations

Knudsen, Bjarne, et al.. (2005). Complete DNA sequence of the mitochondrial genome of the sea-slug, Aplysia californica: Conservation of the gene order in Euthyneura. Molecular Phylogenetics and Evolution. 38(2). 459–469. 67 indexed citations

10.

Knudsen, Bjarne & Michael M. Miyamoto. (2005). Using equilibrium frequencies in models of sequence evolution.. BMC Evolutionary Biology. 5(1). 21–21. 5 indexed citations

11.

Dvornyk, Volodymyr & Bjarne Knudsen. (2005). Functional divergence of the circadian clock proteins in prokaryotes. Genetica. 124(2-3). 247–255. 13 indexed citations

12.

Knudsen, Bjarne & Nadir R. Farid. (2004). Evolutionary divergence of thyrotropin receptor structure. Molecular Genetics and Metabolism. 81(4). 322–334. 8 indexed citations

13.

Knudsen, Bjarne, Ebbe Sloth Andersen, Christian Kroun Damgaard, Jørgen Kjems, & Jan Gorodkin. (2004). Evolutionary rate variation and RNA secondary structure prediction. Computational Biology and Chemistry. 28(3). 219–226. 7 indexed citations

14.

Andersen, Ebbe Sloth, Sonia Contera, Bjarne Knudsen, et al.. (2004). Role of the Trans-activation Response Element in Dimerization of HIV-1 RNA. Journal of Biological Chemistry. 279(21). 22243–22249. 70 indexed citations

15.

Damgaard, Christian Kroun, Ebbe Sloth Andersen, Bjarne Knudsen, Jan Gorodkin, & Jørgen Kjems. (2003). RNA Interactions in the 5′ Region of the HIV-1 Genome. Journal of Molecular Biology. 336(2). 369–379. 97 indexed citations

16.

Knudsen, Bjarne & Michael M. Miyamoto. (2003). Sequence Alignments and Pair Hidden Markov Models Using Evolutionary History. Journal of Molecular Biology. 333(2). 453–460. 47 indexed citations

17.

Puskás, László G., Mária Takács, I Rácz, et al.. (2003). Evolution of the thyrotropin receptor: a G protein coupled receptor with an intrinsic capacity to dimerize. Molecular Genetics and Metabolism. 78(4). 275–290. 23 indexed citations

18.

Knudsen, Bjarne & Jotun Hein. (2003). Pfold: RNA secondary structure prediction using stochastic context-free grammars. Nucleic Acids Research. 31(13). 3423–3428. 314 indexed citations

19.

Gorodkin, Jan, Christian Zwieb, & Bjarne Knudsen. (2001). Semi-automated update and cleanup of structural RNA alignment databases. Bioinformatics. 17(7). 642–645. 13 indexed citations

20.

Hein, Jotun, et al.. (2000). Statistical alignment: computational properties, homology testing and goodness-of-fit 1 1Edited by J. Karn. Journal of Molecular Biology. 302(1). 265–279. 58 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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