Alexander Derry

1.3k total citations
9 papers, 412 citations indexed

About

Alexander Derry is a scholar working on Molecular Biology, Materials Chemistry and Signal Processing. According to data from OpenAlex, Alexander Derry has authored 9 papers receiving a total of 412 indexed citations (citations by other indexed papers that have themselves been cited), including 6 papers in Molecular Biology, 3 papers in Materials Chemistry and 2 papers in Signal Processing. Recurrent topics in Alexander Derry's work include Machine Learning in Bioinformatics (4 papers), Protein Structure and Dynamics (4 papers) and Enzyme Structure and Function (3 papers). Alexander Derry is often cited by papers focused on Machine Learning in Bioinformatics (4 papers), Protein Structure and Dynamics (4 papers) and Enzyme Structure and Function (3 papers). Alexander Derry collaborates with scholars based in United States, Canada and United Kingdom. Alexander Derry's co-authors include Russ B. Altman, Martin Krzywinski, Naomi Altman, Chong Hou, Yoel Fink, Polina Anikeeva, Thomas J. Richner, Chet T. Moritz, Seongjun Park and Chi Lu and has published in prestigious journals such as Proceedings of the National Academy of Sciences, Nature Communications and Nature Methods.

In The Last Decade

Alexander Derry

9 papers receiving 408 citations

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name h Career Trend Papers Cites
Alexander Derry United States 7 147 133 93 77 50 9 412
Sunghoon Joo South Korea 14 95 0.6× 199 1.5× 246 2.6× 55 0.7× 24 0.5× 30 512
Fumiaki Tanaka Japan 12 190 1.3× 83 0.6× 40 0.4× 127 1.6× 14 0.3× 33 428
Gal Chen Israel 7 166 1.1× 234 1.8× 41 0.4× 28 0.4× 24 0.5× 13 506
Guoyi Liu China 13 112 0.8× 270 2.0× 14 0.2× 67 0.9× 10 0.2× 32 586
Natalie Dowell‐Mesfin United States 10 88 0.6× 359 2.7× 407 4.4× 74 1.0× 12 0.2× 15 746
Bige Deniz Unluturk United States 12 218 1.5× 440 3.3× 108 1.2× 116 1.5× 13 0.3× 31 552
Jeongyeon Seo South Korea 12 68 0.5× 116 0.9× 95 1.0× 26 0.3× 14 0.3× 25 393
Zhuo Xiang China 11 117 0.8× 125 0.9× 34 0.4× 28 0.4× 4 0.1× 22 327

Countries citing papers authored by Alexander Derry

Since Specialization
Citations

This map shows the geographic impact of Alexander Derry's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Alexander Derry with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Alexander Derry more than expected).

Fields of papers citing papers by Alexander Derry

Since Specialization
Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Alexander Derry. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Alexander Derry. The network helps show where Alexander Derry may publish in the future.

Co-authorship network of co-authors of Alexander Derry

This figure shows the co-authorship network connecting the top 25 collaborators of Alexander Derry. A scholar is included among the top collaborators of Alexander Derry based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Alexander Derry. Alexander Derry is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

9 of 9 papers shown
1.
Derry, Alexander, et al.. (2025). Protein functional site annotation using local structure embeddings. Proceedings of the National Academy of Sciences. 122(34). e2513219122–e2513219122. 2 indexed citations
2.
Derry, Alexander, Martin Krzywinski, & Naomi Altman. (2023). Neural networks primer. Nature Methods. 20(2). 165–167. 9 indexed citations
3.
Derry, Alexander, Martin Krzywinski, & Naomi Altman. (2023). Convolutional neural networks. Nature Methods. 20(9). 1269–1270. 50 indexed citations
4.
Anand, Namrata, Raphael R. Eguchi, Irimpan I. Mathews, et al.. (2022). Protein sequence design with a learned potential. Nature Communications. 13(1). 746–746. 92 indexed citations
5.
Derry, Alexander & Russ B. Altman. (2022). COLLAPSE : A representation learning framework for identification and characterization of protein structural sites. Protein Science. 32(2). e4541–e4541. 6 indexed citations
6.
Derry, Alexander, Kristy A. Carpenter, & Russ B. Altman. (2022). Training data composition affects performance of protein structure analysis algorithms.. PubMed. 27. 10–21. 6 indexed citations
7.
Derry, Alexander, Kristy A. Carpenter, & Russ B. Altman. (2021). Training data composition affects performance of protein structure analysis algorithms. 10–21. 2 indexed citations
8.
Derry, Alexander, et al.. (2019). A Literature-Based Knowledge Graph Embedding Method for Identifying Drug Repurposing Opportunities in Rare Diseases. PubMed. 25. 463–474. 54 indexed citations
9.
Lu, Chi, Seongjun Park, Thomas J. Richner, et al.. (2017). Flexible and stretchable nanowire-coated fibers for optoelectronic probing of spinal cord circuits. Science Advances. 3(3). e1600955–e1600955. 191 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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