Standout Papers

Twelve years of SAMtool... 2006 2026 2012 2019 5.6k
  1. Twelve years of SAMtools and BCFtools (2021)
    Petr Danecek, James Bonfield et al. GigaScience
  2. Assessment of methods for amino acid matrix selection and their use on empirical data shows that ad hoc assumptions for choice of matrix are not justified (2006)
    Thomas Keane, Christopher J. Creevey et al. BMC Evolutionary Biology
  3. HTSlib: C library for reading/writing high-throughput sequencing data (2021)
    James Bonfield, John Marshall et al. GigaScience

Immediate Impact

6 by Nobel laureates 19 from Science/Nature 57 standout
Sub-graph 1 of 22

Citing Papers

An atlas of transcription initiation reveals regulatory principles of gene and transposable element expression in early mammalian development
2025 Standout
TRAPT: a multi-stage fused deep learning framework for predicting transcriptional regulators based on large-scale epigenomic data
2025 Standout
7 intermediate papers

Works of Thomas Keane being referenced

Twelve years of SAMtools and BCFtools
2021 Standout
The genomic landscape shaped by selection on transposable elements across 18 mouse strains
2012
and 1 more

Author Peers

Author Last Decade Papers Cites
Thomas Keane 5904 2814 2320 76 10.6k
Maido Remm 6319 2811 3117 93 12.4k
Anton Nekrutenko 9091 2192 2190 83 13.9k
Douglas M. Ruden 5584 3496 2163 102 11.9k
David Wheeler 9670 1910 1894 87 13.6k
John Welsh 4361 3163 2213 121 11.3k
Xiangyi Lu 4722 3328 2126 77 9.8k
James Taylor 10157 2074 2107 82 15.5k
Christian J. Stoeckert 7150 1727 2041 111 11.3k
Shane McCarthy 4181 2638 1724 50 8.2k
Phil Green 8626 3496 3661 114 16.1k

All Works

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Rankless by CCL
2026