Citation Impact
Citing Papers
Principles for designing proteins with cavities formed by curved β sheets
2017 StandoutScienceNobel
antiSMASH 6.0: improving cluster detection and comparison capabilities
2021 Standout
De novo design of transmembrane β barrels
2021 StandoutScienceNobel
De novo design of self-assembling helical protein filaments
2018 StandoutScienceNobel
Tight and specific lanthanide binding in a de novo TIM barrel with a large internal cavity designed by symmetric domain fusion
2020 StandoutNobel
Structures of the CRISPR genome integration complex
2017 StandoutScienceNobel
Elucidation of the MD-2/TLR4 Interface Required for Signaling by Lipid IVa
2008
The Stability Landscape of de novo TIM Barrels Explored by a Modular Design Approach
2021 StandoutNobel
Topologically-guided continuous protein crystallization controls bacterial surface layer self-assembly
2019 Nobel
MICAN : a protein structure alignment algorithm that can handle Multiple-chains, Inverse alignments, C α only models, Alternative alignments, and Non-sequential alignments
2013
antiSMASH 7.0: new and improved predictions for detection, regulation, chemical structures and visualisation
2023 Standout
Exploring protein–ligand recognition with Binding MOAD
2005
Multistate and functional protein design using RoseTTAFold sequence space diffusion
2024 StandoutNobel
Discoveries in structure and physiology of mechanically activated ion channels
2020 StandoutNatureNobel
Sequence motifs, polar interactions and conformational changes in helical membrane proteins
2003
S-layers: principles and applications
2014
Computational Design of a Protein-Based Enzyme Inhibitor
2013 StandoutNobel
Reaching for high-hanging fruit in drug discovery at protein–protein interfaces
2007 StandoutNature
A De Novo Protein Binding Pair By Computational Design and Directed Evolution
2011 StandoutNobel
Crystal structure of the thioesterase domain of human fatty acid synthase inhibited by Orlistat
2007
Fatty acid synthase and the lipogenic phenotype in cancer pathogenesis
2007 Standout
Towards Prediction of Metabolic Products of Polyketide Synthases: An In Silico Analysis
2009
Small‐Molecule Affinity Ligands for Protein Purification: Combined Computational Enrichment and Automated In‐line Screening of an Optically Encoded Library
2010 StandoutNobel
STRING v10: protein–protein interaction networks, integrated over the tree of life
2014 Standout
Utility of homology models in the drug discovery process
2004
Estimation of Amino Acid Residue Substitution Rates at Local Spatial Regions and Application in Protein Function Inference: A Bayesian Monte Carlo Approach
2005
Predicting protein function from sequence and structure
2007
antiSMASH: rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences
2011 Standout
CASTp: computed atlas of surface topography of proteins with structural and topographical mapping of functionally annotated residues
2006
CPC: assess the protein-coding potential of transcripts using sequence features and support vector machine
2007 Standout
Hot spots—A review of the protein–protein interface determinant amino‐acid residues
2007
High-throughput crystallography for structural genomics☆
2009
Foreign DNA capture during CRISPR–Cas adaptive immunity
2015 StandoutNatureNobel
X‐ray crystal structures of the conserved hypothetical proteins from Arabidopsis thaliana gene loci At5g11950 and AT2g37210
2006
Piezos thrive under pressure: mechanically activated ion channels in health and disease
2017 StandoutNobel
On quantification of geometry and topology of protein pockets and channels for assessing mutation effects
2018
Dali server: conservation mapping in 3D
2010 Standout
Design of biologically active binary protein 2D materials
2021 StandoutNatureNobel
Prediction of transmembrane helix orientation in polytopic membrane proteins.
2006
Protein–Protein Interactions: Hot Spots and Structurally Conserved Residues often Locate in Complemented Pockets that Pre-organized in the Unbound States: Implications for Docking
2004
Structure of the mechanically activated ion channel Piezo1
2017 StandoutNatureNobel
RNA-guided genetic silencing systems in bacteria and archaea
2012 StandoutNatureNobel
Hotspot-Centric De Novo Design of Protein Binders
2011 StandoutNobel
Advances and pitfalls of protein structural alignment
2009
Evolution and classification of the CRISPR–Cas systems
2011 StandoutNobel
De novo design of bioactive protein switches
2019 StandoutNatureNobel
Diversity in S-layers
2016
Multiple roles of TorD-like chaperones in the biogenesis of molybdoenzymes
2009
Gene Map of the HLA Region, Graves’ Disease and Hashimoto Thyroiditis, and Hematopoietic Stem Cell Transplantation
2015
Crystal Structures of Multidrug Binding Protein TtgR in Complex with Antibiotics and Plant Antimicrobials
2007
Integrase-mediated spacer acquisition during CRISPR–Cas adaptive immunity
2015 StandoutNatureNobel
Interstrand Pairing Patterns in β-Barrel Membrane Proteins: The Positive-outside Rule, Aromatic Rescue, and Strand Registration Prediction
2005
A dual function of the CRISPR–Cas system in bacterial antivirus immunity and DNA repair
2010
The Biology of CRISPR-Cas: Backward and Forward
2018 StandoutNobel
Adaptation in CRISPR-Cas Systems
2016 StandoutNobel
The SWISS-MODEL Repository and associated resources
2008 Standout
Structural Analysis of a Monomeric Form of the Twin-Arginine Leader Peptide Binding Chaperone Escherichia coli DmsD
2009
The role of lipids in mechanosensation
2015
SbsB structure and lattice reconstruction unveil Ca2+ triggered S-layer assembly
2012 Nature
Voronoi and Voronoi-related tessellations in studies of protein structure and interaction
2004
Prediction of catalytic residues using Support Vector Machine with selected protein sequence and structural properties
2006
Voronoia: analyzing packing in protein structures
2008
Genome Editing B.C. (Before CRISPR): Lasting Lessons from the “Old Testament”
2018
Design of Diverse Asymmetric Pockets in De Novo Homo-oligomeric Proteins
2023 Nobel
Nonpolar solutes enhance water structure within hydration shells while reducing interactions between them
2005 StandoutNobel
Self-Assembly of “S-Bilayers”, a Step Toward Expanding the Dimensionality of S-Layer Assemblies
2013 StandoutNobel
A Novel Approach to Evaluate Titanium Dioxide Nanoparticle–Protein Interaction Through Docking: An Insight into Mechanism of Action
2015
Accuracy of functional surfaces on comparatively modeled protein structures
2011
Novel Approach to Structure-Based Pharmacophore Search Using Computational Geometry and Shape Matching Techniques
2008
3V: cavity, channel and cleft volume calculator and extractor
2010
Structure of the STRA6 receptor for retinol uptake
2016 StandoutScienceNobel
Regulatory T Cells and Human Disease
2020 StandoutNobel
The SWISS-MODEL workspace: a web-based environment for protein structure homology modelling
2005 Standout
CRISPR-Cas: biology, mechanisms and relevance
2016 StandoutNobel
De novo design of protein homo-oligomers with modular hydrogen-bond network–mediated specificity
2016 StandoutScienceNobel
The structural basis of lipopolysaccharide recognition by the TLR4–MD-2 complex
2009 StandoutNature
Rational Design of Helical Nanotubes from Self-Assembly of Coiled-Coil Lock Washers
2013
Protein function prediction via graph kernels
2005
Networks of electrostatic and hydrophobic interactions modulate the complex folding free energy surface of a designed βα protein
2019 StandoutNobel
Cas9 interrogates DNA in discrete steps modulated by mismatches and supercoiling
2020 StandoutNobel
Prediction of membrane protein structures with complex topologies using limited constraints
2009 StandoutNobel
The Mononuclear Molybdenum Enzymes
2014 Standout
The effect of ligand efficacy on the formation and stability of a GPCR-G protein complex
2009 StandoutNobel
Molybdenum enzymes in bacteria and their maturation
2011
CRISPR-Cas guides the future of genetic engineering
2018 StandoutScienceNobel
Revealing Noncovalent Interactions
2010 Standout
The interaction between the ER membrane protein UNC93B and TLR3, 7, and 9 is crucial for TLR signaling
2007 StandoutNobel
CASTp 3.0: computed atlas of surface topography of proteins
2018 Standout
antiSMASH 5.0: updates to the secondary metabolite genome mining pipeline
2019 Standout
Works of T.A. Binkowski being referenced
Topology independent protein structural alignment
2007
pvSOAR: detecting similar surface patterns of pocket and void surfaces of amino acid residues on proteins
2004
Identification by random forest method of HLA class I amino acid substitutions associated with lower survival at day 100 in unrelated donor hematopoietic cell transplantation
2011
The 1.38 Å crystal structure of DmsD protein from Salmonella typhimurium, a proofreading chaperone on the Tat pathway
2008
Predicting and Characterizing Protein Functions Through Matching Geometric and Evolutionary Patterns of Binding Surfaces
2008
CASTp: Computed Atlas of Surface Topography of proteins
2003
Protein Functional Surfaces: Global Shape Matching and Local Spatial Alignments of Ligand Binding Sites
2008
Protein surface analysis for function annotation in high‐throughput structural genomics pipeline
2005
Higher-order Interhelical Spatial Interactions in Membrane Proteins
2003
Structure of Surface Layer Homology (SLH) Domains from Bacillus anthracis Surface Array Protein
2011
Inferring Functional Relationships of Proteins from Local Sequence and Spatial Surface Patterns
2003