Standout Papers

RNA-Seq: a revolutionary tool for transcriptomics 2001 2026 2009 2017 8.7k
  1. RNA-Seq: a revolutionary tool for transcriptomics (2008)
    Zhong Wang, Mark Gerstein et al. Nature Reviews Genetics
  2. The Transcriptional Landscape of the Yeast Genome Defined by RNA Sequencing (2008)
    Ugrappa Nagalakshmi, Zhong Wang et al. Science
  3. Global Analysis of Protein Activities Using Proteome Chips (2001)
    Heng Zhu, David A. Hall et al. Science
  4. Comparing protein abundance and mRNA expression levels on a genomic scale. (2003)
    Dov Greenbaum, Christopher M. Colangelo et al. Genome Biology
  5. Evaluation of 16S rRNA gene sequencing for species and strain-level microbiome analysis (2019)
    Jethro S. Johnson, Daniel Spakowicz et al. Nature Communications
  6. CNVnator: An approach to discover, genotype, and characterize typical and atypical CNVs from family and population genome sequencing (2011)
    Alexej Abyzov, Alexander E. Urban et al. Genome Research
  7. A Bayesian Networks Approach for Predicting Protein-Protein Interactions from Genomic Data (2003)
    Ronald Jansen, Haiyuan Yu et al. Science
  8. Global Identification of Human Transcribed Sequences with Genome Tiling Arrays (2004)
    Paul Bertone, Viktor Štolc et al. Science
  9. FOXG1-Dependent Dysregulation of GABA/Glutamate Neuron Differentiation in Autism Spectrum Disorders (2015)
    Jessica Mariani, Gianfilippo Coppola et al. Cell
  10. The Importance of Bottlenecks in Protein Networks: Correlation with Gene Essentiality and Expression Dynamics (2007)
    Haiyuan Yu, Philip M. Kim et al. PLoS Computational Biology
  11. Genomic analysis of regulatory network dynamics reveals large topological changes (2004)
    Nicholas M. Luscombe, M. Madan Babu et al. Nature
  12. Structural Mechanisms for Domain Movements in Proteins (1994)
    Mark Gerstein, Arthur M. Lesk et al. Biochemistry
  13. Analysis of yeast protein kinases using protein chips (2000)
    Heng Zhu, James F. Klemic et al. Nature Genetics
  14. Unlocking the secrets of the genome (2009)
    S Celniker, Laura A. L. Dillon et al. Nature
  15. Subcellular localization of the yeast proteome (2002)
    Anuj Kumar, Seema Agarwal et al. Genes & Development
  16. Structure and evolution of transcriptional regulatory networks (2004)
    M. Madan Babu, Nicholas M. Luscombe et al. Current Opinion in Structural Biology
  17. Statistical analysis of amino acid patterns in transmembrane helices: the GxxxG motif occurs frequently and in association with β-branched residues at neighboring positions (2000)
    Alessandro Senes, Mark Gerstein et al. Journal of Molecular Biology
  18. Electron diffraction analysis of structural changes in the photocycle of bacteriorhodopsin. (1993)
    Sriram Subramaniam, Mark Gerstein et al. The EMBO Journal

Immediate Impact

12 by Nobel laureates 51 from Science/Nature 87 standout
Sub-graph 1 of 18

Citing Papers

Organoid single-cell genomic atlas uncovers human-specific features of brain development
2019 StandoutNatureNobel
STRING v11: protein–protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets
2018 Standout
18 intermediate papers

Works of Mark Gerstein being referenced

Improved Reconstruction of In Silico Gene Regulatory Networks by Integrating Knockout and Perturbation Data
2010
Annotation Transfer Between Genomes: Protein–Protein Interologs and Protein–DNA Regulogs
2004
and 18 more

Author Peers

Author Last Decade Papers Cites
Mark Gerstein 46809 8430 7660 543 59.7k
George M. Church 71437 15558 3876 523 87.7k
Yang Zhang 36046 3102 5050 907 51.1k
Lars Juhl Jensen 47759 6291 7950 232 71.9k
David S. Wishart 47041 4843 2954 537 73.1k
Jonathan S. Weissman 66333 8084 6848 289 76.8k
Jeremy C. Smith 31235 4103 3097 818 56.8k
Ronald W. Davis 55358 13127 2676 539 82.7k
Trey Ideker 44414 6165 7931 236 63.2k
Alex Bateman 39518 6694 2737 156 55.7k
Chris Sander 67938 8129 25841 304 90.9k

All Works

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2026