Zhining Wen

3.2k citations
88 papers · 2.6k · 1 hit paper · h-index 20

Impact in

  • Biophysics top 1%
    • Spectroscopy Techniques in Biomedical and Chemical Research
  • Molecular Biology top 5%
    • Machine Learning in Bioinformatics
    • Gene expression and cancer classification
    • Bioinformatics and Genomic Networks
    • Protein Structure and Dynamics

Papers in

  • Biophysics 13
    • Spectroscopy Techniques in Biomedical and Chemical Research 13
  • Molecular Biology 31
    • Gene expression and cancer classification 14
    • Machine Learning in Bioinformatics 10
    • Bioinformatics and Genomic Networks 2
    • Protein Structure and Dynamics 2
Co-authors
Menglong Li (44 shared papers)Yanzhi Guo (11 shared papers)Lezheng Yu (2 shared papers)Longjiang Li (7 shared papers)Kanming Wang (2 shared papers)Ying Sheng Huang (5 shared papers)Leming M. Shi (4 shared papers)Bing Yan (5 shared papers)
Journals
BMC Bioinformatics (7 papers)Chemometrics and Intelligent Laboratory Systems (7 papers)Frontiers in Pharmacology (5 papers)International Journal of Molecular Sciences (4 papers)Amino Acids (4 papers)
Partner nations
ChinaUnited StatesHong Kong

In The Last Decade

Zhining Wen

84 papers receiving 2.6k citations

Zhining Wen's Hit Papers

The MicroArray Quality Control (MAQC)-II study of common practices for the development and validation of microarray-based predictive models 2010 · 711 citations
7110+5+10Years since publication200400600
What are hit papers?

Paper score: A paper's citations measured against the top-1% bar of its own field and year: the square root of citations ÷ bar, so 1 means right at the bar and 2 means four times its citations. The bar blends the citation counts that enter the top 1% of the paper's subfields in its year (weighted 89.5%), of those subfields over all years (0.5%) and of its year across all fields (10%); a subfield and year with fewer than 400 papers takes its year's bar. Papers from 2026 are not scored yet: in an unfinished year, when a paper appeared matters more than how it is cited.

Hit paper: A paper cited at least 1.5× the top-1% bar of its field and year: a paper score of at least √1.5.

  1. 2010 Nature Biotechnology

Peers

Zhining Wen
Comparison fields: 5 of 103
  • Biophysics 153
  • Molecular Biology 1.1k
  • Cancer Research 135
  • Computational Theory and Mathematics 127
  • Hematology 72
Replace Menglong Li with:
Menglong Li China
Marc R. Birtwistle United States
Marc A. Hafner United States
Yuri Karl Peterson United States
Dolores Diaz United States
Eric A. Sobie United States
Jerome Thomas Mettetal United States
Zihan Liu China
Juan Tan China
Anneli Karlsson Sweden
Zhining Wen relative to Menglong Li China Menglong Li's profile →
Citations per field
00.5×2×3×3.8×
Menglong Li · 1×
Citations per year

Countries citing papers authored by Zhining Wen

Since Specialization
Citations

This map shows the geographic impact of Zhining Wen's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Zhining Wen with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Zhining Wen more than expected).

Fields of papers citing papers by Zhining Wen

Since Specialization
Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Zhining Wen. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Zhining Wen. The network helps show where Zhining Wen may publish in the future.

Co-authors

The 25 scholars most cited alongside Zhining Wen, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with Zhining Wen Line = papers co-authored together Zhining Wen links everyone, so they are left out of the graph.

All Works

20 of 20 papers shown

Showing the 20 most-cited of 88 papers — load more, or switch the sort, to bring in the rest.

#Work
1
The MicroArray Quality Control (MAQC)-II study of common practices for the development and validation of microarray-based predictive models
Nature Biotechnology ·Leming M. Shi, Zhining Wen, Minjun Chen, Huixiao Hong, Roger Perkins, James C. Fuscoe, Weigong Ge, Stephen Harris
Hit paper breakdown →		2010711
2
Using support vector machine combined with auto covariance to predict protein–protein interactions from protein sequences
Nucleic Acids Research ·Yanzhi Guo, Lezheng Yu, Zhining Wen, Menglong Li
2008571
3
Discovery of Molecular Mechanisms of Traditional Chinese Medicinal Formula Si-Wu-Tang Using Gene Expression Microarray and Connectivity Map
PLoS ONE ·Zhining Wen, Zhijun Kevin Wang, Ranadheer Ravula, Lun Yang, Jun Xu, Charles H Wang, Zhong Zuo, Moses S.S. Chow
2011125
4
Classifying G protein-coupled receptors and nuclear receptors on the basis of protein power spectrum from fast Fourier transform
Amino Acids ·M. Lu, Zhining Wen, Kanming Wang, Guojing Li +3 others
200683
5
Delaunay triangulation with partial least squares projection to latent structures: a model for G-protein coupled receptors classification and fast structure recognition
Amino Acids ·Zhining Wen, Menghan Li, Yuanyuan Li, Yanzhi Guo, Kanming Wang
200662
6
Label-free blood serum detection by using surface-enhanced Raman spectroscopy and support vector machine for the preoperative diagnosis of parotid gland tumors
BMC Cancer ·Bing Yan, Bo Li, Zhining Wen, Xianyang Luo, Lili Xue, Longjiang Li
201554
7
Using pseudo amino acid composition to predict transmembrane regions in protein: cellular automata and Lempel-Ziv complexity
Amino Acids ·Zhining Wen, Jian Yin +4 others
200747
8
Research on the Raman spectral character and diagnostic value of squamous cell carcinoma of oral mucosa
Journal of Raman Spectroscopy ·Yi Li, Zhining Wen, Longjiang Li, Meng‐Long Li, Yanzhi Guo +1 other
200946
9
Predicting disease-associated substitution of a single amino acid by analyzing residue interactions
BMC Bioinformatics ·Yizhou Li, Zhining Wen, Jiamin Xiao, Hui Yin, Lezheng Yu, Menglong Li +1 other
201144
10
Discrimination of parotid neoplasms from the normal parotid gland by use of Raman spectroscopy and support vector machine
Oral Oncology ·Bing Yan, Yi Li, Gang Yang, Zhining Wen, Menglong Li, Longjiang Li
201143
11
Analyzing functional similarity of protein sequences with discrete wavelet transform
Computational Biology and Chemistry ·Zhining Wen, Ke-long Wang, Menglong Li, Fusheng Nie, Yi Yang
200541
12
Predicting G‐protein coupled receptors–G‐protein coupling specificity based on autocross‐covariance transform
Proteins Structure Function and Bioinformatics ·Yanzhi Guo, Menglong Li, Min-Chun Lu, Zhining Wen, Zhongtian Huang
200635
13
Transcriptional profiling of Chinese medicinal formula Si-Wu-Tang on breast cancer cells reveals phytoestrogenic activity
BMC Complementary and Alternative Medicine ·Mandy Liu, Jeffery Fan, Zhijun Kevin Wang, Charles H Wang, Zhong Zuo, Moses SS Chow, Leming M. Shi, Zhining Wen
201333
14
A verified genomic reference sample for assessing performance of cancer panels detecting small variants of low allele frequency
Genome biology ·Wendell D. Jones, Binsheng Gong, Natalia Novoradovskaya, Dan Li, Rebecca L. Kusko, Todd Richmond, Donald Joseph Johann, Halil Bişğin
202133
15
Drug-Induced Rhabdomyolysis Atlas (DIRA) for idiosyncratic adverse drug reaction management
Drug Discovery Today ·Zhining Wen, Liang Yu, Yingyi Hao, Brian Delavan, Ruili Huang, Mike Mikailov, Weida Tong, Menglong Li
201831
16
Abnormal gene expression in cerebellum of Npc1−/− mice during postnatal development
Brain Research ·Guanghong Liao, Zhining Wen, Kristopher J. L. Irizarry, Ying Sheng Huang, Katherine Mitsouras, Mariam Darmani, Terry L. Leon, Leming M. Shi
201029
17
Changes in gene expression after phencyclidine administration in developing rats: a potential animal model for schizophrenia
International Journal of Developmental Neuroscience ·F. Liu, X. Zou, Natalya Sadovova, X. Zhang, Lei Guo, Feng Qian, Zhining Wen, Tucker A. Patterson
201026
18
Raman Spectroscopy: A Potential Diagnostic Tool for Oral Diseases
Frontiers in Cellular and Infection Microbiology ·Yuwei Zhang, Liang Ren, Qi Wang, Zhining Wen, Chengcheng Liu, Yi Ding
202225
19
Cross-oncopanel study reveals high sensitivity and accuracy with overall analytical performance depending on genomic regions
Genome biology ·Binsheng Gong, Rebecca L. Kusko, Natalia Novoradovskaya, Yifan Zhang, Shangzi Wang, Carlos Pabón-Peña, Zhihong Zhang, Kevin Lai
202123
20
Evaluation of gene expression data generated from expired Affymetrix GeneChip® microarrays using MAQC reference RNA samples
BMC Bioinformatics ·Zhining Wen, Charles H Wang, Quan Shi, Ying Sheng Huang, Zhenqiang Su, Huixiao Hong, Weida Tong, Leming M. Shi
201020

About Zhining Wen

Zhining Wen is a scholar working on Biophysics, Molecular Biology, Computational Theory and Mathematics, Cancer Research and Analytical Chemistry, having authored 88 papers that have together received 2.6k indexed citations. Recurring topics across this work include Gene expression and cancer classification (14 papers), Spectroscopy Techniques in Biomedical and Chemical Research (13 papers), Machine Learning in Bioinformatics (10 papers), Computational Drug Discovery Methods (6 papers), Spectroscopy and Chemometric Analyses (4 papers), MicroRNA in disease regulation (2 papers), Bioinformatics and Genomic Networks (2 papers) and Protein Structure and Dynamics (2 papers). The work is most often cited by research in Biophysics (153 citations), Molecular Biology (1.1k citations), Cancer Research (135 citations), Computational Theory and Mathematics (127 citations) and Hematology (72 citations). Zhining Wen has collaborated with scholars based in China, United States and Hong Kong. Frequent co-authors include Menglong Li, Yanzhi Guo, Lezheng Yu, Longjiang Li, Kanming Wang, Ying Sheng Huang, Leming M. Shi, Bing Yan, Charles H Wang and Menglong Li. Their work appears in journals such as BMC Bioinformatics, Chemometrics and Intelligent Laboratory Systems, Frontiers in Pharmacology, International Journal of Molecular Sciences and Amino Acids.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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