Yuri Pirola

768 total citations
30 papers, 321 citations indexed

About

Yuri Pirola is a scholar working on Molecular Biology, Genetics and Artificial Intelligence. According to data from OpenAlex, Yuri Pirola has authored 30 papers receiving a total of 321 indexed citations (citations by other indexed papers that have themselves been cited), including 21 papers in Molecular Biology, 10 papers in Genetics and 9 papers in Artificial Intelligence. Recurrent topics in Yuri Pirola's work include Genomics and Phylogenetic Studies (12 papers), RNA and protein synthesis mechanisms (7 papers) and Algorithms and Data Compression (6 papers). Yuri Pirola is often cited by papers focused on Genomics and Phylogenetic Studies (12 papers), RNA and protein synthesis mechanisms (7 papers) and Algorithms and Data Compression (6 papers). Yuri Pirola collaborates with scholars based in Italy, France and Netherlands. Yuri Pirola's co-authors include Paola Bonizzoni, Raffaella Rizzi, Gianluca Della Vedova, Riccardo Dondi, Gunnar W. Klau, Simone Zaccaria, Nadia Pisanti, Stefano Beretta, Ferdinando Chiaradonna and Francesca Ricciardiello and has published in prestigious journals such as Bioinformatics, PLoS Genetics and BMC Bioinformatics.

In The Last Decade

Yuri Pirola

29 papers receiving 317 citations

Peers

Yuri Pirola

GENET

Chih Lee United States

Filippo Utro United States

Brad Solomon United States

Raffaella Rizzi Italy

Eugene van Someren Netherlands

Raphaël Mourad France

Olivier Périn France

Juexiao Zhou Saudi Arabia

Chaoyang Zhang United States

Chih Lee United States

Yuri Pirola

241 ×1.1

114 ×1.5

GENET

52 ×0.8

33 ×0.7

40 ×1.3

Citations per year, relative to Yuri Pirola Yuri Pirola (= 1×) peers Chih Lee

Countries citing papers authored by Yuri Pirola

Since Specialization

Citations

This map shows the geographic impact of Yuri Pirola's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Yuri Pirola with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Yuri Pirola more than expected).

Fields of papers citing papers by Yuri Pirola

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Yuri Pirola. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Yuri Pirola. The network helps show where Yuri Pirola may publish in the future.

Co-authorship network of co-authors of Yuri Pirola

This figure shows the co-authorship network connecting the top 25 collaborators of Yuri Pirola. A scholar is included among the top collaborators of Yuri Pirola based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Yuri Pirola. Yuri Pirola is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

Bonizzoni, Paola, et al.. (2024). RecGraph: recombination-aware alignment of sequences to variation graphs. Bioinformatics. 40(5). 1 indexed citations

Baaijens, Jasmijn A., Paola Bonizzoni, Christina Boucher, et al.. (2022). Computational graph pangenomics: a tutorial on data structures and their applications. Natural Computing. 21(1). 81–108. 21 indexed citations

Ciccolella, Simone, et al.. (2022). MALVIRUS: an integrated application for viral variant analysis. BMC Bioinformatics. 22(S15). 625–625. 2 indexed citations

Pirola, Yuri, et al.. (2020). Shark: fishing relevant reads in an RNA-Seq sample. Bioinformatics. 37(4). 464–472. 4 indexed citations

Bonizzoni, Paola, et al.. (2020). Computing the multi-string BWT and LCP array in external memory. Theoretical Computer Science. 862. 42–58. 3 indexed citations

Bonizzoni, Paola, et al.. (2019). Multithread Multistring Burrows–Wheeler Transform and Longest Common Prefix Array. Journal of Computational Biology. 26(9). 948–961. 8 indexed citations

Bonizzoni, Paola, et al.. (2017). FSG: Fast String Graph Construction for De Novo Assembly. Journal of Computational Biology. 24(10). 953–968. 6 indexed citations

Chiaradonna, Ferdinando, Yuri Pirola, Francesca Ricciardiello, & Roberta Palorini. (2016). Transcriptional profiling of immortalized and K-ras-transformed mouse fibroblasts upon PKA stimulation by forskolin in low glucose availability. Genomics Data. 9. 100–104. 2 indexed citations

Palorini, Roberta, Giuseppina Votta, Yuri Pirola, et al.. (2016). Protein Kinase A Activation Promotes Cancer Cell Resistance to Glucose Starvation and Anoikis. PLoS Genetics. 12(3). e1005931–e1005931. 68 indexed citations

10.

Biscarini, Filippo, Hermann Schwarzenbacher, Hubert Pausch, et al.. (2016). Use of SNP genotypes to identify carriers of harmful recessive mutations in cattle populations. BMC Genomics. 17(1). 857–857. 12 indexed citations

11.

Bonizzoni, Paola, Riccardo Dondi, Gunnar W. Klau, et al.. (2016). On the Minimum Error Correction Problem for Haplotype Assembly in Diploid and Polyploid Genomes. Journal of Computational Biology. 23(9). 718–736. 20 indexed citations

12.

Beerenwinkel, Niko, Stefano Beretta, Paola Bonizzoni, Riccardo Dondi, & Yuri Pirola. (2014). Covering Pairs in Directed Acyclic Graphs. The Computer Journal. 58(7). 1673–1686. 3 indexed citations

13.

Beretta, Stefano, Paola Bonizzoni, Gianluca Della Vedova, Yuri Pirola, & Raffaella Rizzi. (2013). Modeling Alternative Splicing Variants from RNA-Seq Data with Isoform Graphs. Journal of Computational Biology. 21(1). 16–40. 13 indexed citations

14.

Pirola, Yuri, Gianluca Della Vedova, Paola Bonizzoni, Alessandra Stella, & Filippo Biscarini. (2013). Haplotype-based prediction of gene alleles using pedigrees and SNP genotypes. BOA (University of Milano-Bicocca). 33–41. 5 indexed citations

15.

Pirola, Yuri, Raffaella Rizzi, Ernesto Picardi, et al.. (2012). PIntron: a fast method for detecting the gene structure due to alternative splicing via maximal pairings of a pattern and a text. BMC Bioinformatics. 13(S5). S2–S2. 6 indexed citations

16.

Pirola, Yuri, Gianluca Della Vedova, Stefano Biffani, Alessandra Stella, & Paola Bonizzoni. (2012). A fast and practical approach to genotype phasing and imputation on a pedigree with erroneous and incomplete information. IEEE/ACM Transactions on Computational Biology and Bioinformatics. 9(6). 1582–1594. 1 indexed citations

17.

Vanneschi, Leonardo, Yuri Pirola, Giancarlo Mauri, et al.. (2011). A study of the neutrality of Boolean function landscapes in genetic programming. Theoretical Computer Science. 425. 34–57. 7 indexed citations

18.

Pirola, Yuri, Paola Bonizzoni, & Tao Jiang. (2011). An Efficient Algorithm for Haplotype Inference on Pedigrees with Recombinations and Mutations. IEEE/ACM Transactions on Computational Biology and Bioinformatics. 9(1). 12–25. 5 indexed citations

19.

Bonizzoni, Paola, et al.. (2010). Parameterized Complexity of k-Anonymity: Hardness and Tractability. 24 indexed citations

20.

Bonizzoni, Paola, Gianluca Della Vedova, Riccardo Dondi, Yuri Pirola, & Roméo Rizzi. (2010). Pure Parsimony Xor Haplotyping. IEEE/ACM Transactions on Computational Biology and Bioinformatics. 7(4). 598–610. 2 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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