Yingbo Cui

908 total citations
26 papers, 511 citations indexed

About

Yingbo Cui is a scholar working on Molecular Biology, Artificial Intelligence and Computer Networks and Communications. According to data from OpenAlex, Yingbo Cui has authored 26 papers receiving a total of 511 indexed citations (citations by other indexed papers that have themselves been cited), including 18 papers in Molecular Biology, 9 papers in Artificial Intelligence and 5 papers in Computer Networks and Communications. Recurrent topics in Yingbo Cui's work include Genomics and Phylogenetic Studies (13 papers), RNA and protein synthesis mechanisms (7 papers) and Algorithms and Data Compression (7 papers). Yingbo Cui is often cited by papers focused on Genomics and Phylogenetic Studies (13 papers), RNA and protein synthesis mechanisms (7 papers) and Algorithms and Data Compression (7 papers). Yingbo Cui collaborates with scholars based in China, United States and Austria. Yingbo Cui's co-authors include Xiangke Liao, Shaoliang Peng, Jiaming Xu, Wubing Zhang, Wei Li, Ziyi Li, Matthias Hinterndorfer, Mei Wang, Alexander T.H. Wu and Xiaoqing Wang and has published in prestigious journals such as Nucleic Acids Research, Bioinformatics and Nature Protocols.

In The Last Decade

Yingbo Cui

19 papers receiving 509 citations

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name h Career Trend Papers Cites
Yingbo Cui China 8 422 61 54 45 38 26 511
Ruochi Zhang United States 12 676 1.6× 31 0.5× 95 1.8× 76 1.7× 44 1.2× 17 730
Sheng Qu China 4 422 1.0× 39 0.6× 42 0.8× 28 0.6× 51 1.3× 8 482
Reza Mirzazadeh Sweden 11 658 1.6× 45 0.7× 100 1.9× 55 1.2× 51 1.3× 15 755
Natalie A. Twine Australia 10 320 0.8× 39 0.6× 84 1.6× 42 0.9× 51 1.3× 26 434
Chenyu Zhu China 14 644 1.5× 119 2.0× 61 1.1× 89 2.0× 95 2.5× 36 865
Laetitia Maroc Canada 7 419 1.0× 63 1.0× 77 1.4× 49 1.1× 37 1.0× 10 516
Ferhat Alkan Denmark 11 494 1.2× 24 0.4× 65 1.2× 29 0.6× 17 0.4× 18 573
Bicna Song United States 5 411 1.0× 64 1.0× 74 1.4× 19 0.4× 42 1.1× 6 490
Norbert Dojer Poland 11 824 2.0× 77 1.3× 104 1.9× 103 2.3× 22 0.6× 17 927
Benjamin P. Roscoe United States 9 477 1.1× 49 0.8× 178 3.3× 23 0.5× 21 0.6× 9 541

Countries citing papers authored by Yingbo Cui

Since Specialization
Citations

This map shows the geographic impact of Yingbo Cui's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Yingbo Cui with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Yingbo Cui more than expected).

Fields of papers citing papers by Yingbo Cui

Since Specialization
Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Yingbo Cui. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Yingbo Cui. The network helps show where Yingbo Cui may publish in the future.

Co-authorship network of co-authors of Yingbo Cui

This figure shows the co-authorship network connecting the top 25 collaborators of Yingbo Cui. A scholar is included among the top collaborators of Yingbo Cui based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Yingbo Cui. Yingbo Cui is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

20 of 20 papers shown
1.
Cui, Yingbo, et al.. (2025). A survey of sequence-to-graph mapping algorithms in the pangenome era. Genome biology. 26(1). 138–138. 2 indexed citations
2.
Yang, Canqun, et al.. (2025). Fast noisy long read alignment with multi-level parallelism. BMC Bioinformatics. 26(1). 118–118.
3.
4.
Xiang, Weiming, et al.. (2024). CSV-Filter: a deep learning-based comprehensive structural variant filtering method for both short and long reads. Bioinformatics. 40(9). 2 indexed citations
5.
Guo, Yifei, et al.. (2024). WFA-vect: a SIMD wavefront algorithm for gap-affine pairwise alignment. 528–533. 1 indexed citations
6.
Tang, Tao, Kai Lu, Peng Lin, et al.. (2023). SNCL: a supernode OpenCL implementation for hybrid computing arrays. The Journal of Supercomputing. 80(7). 9471–9493. 1 indexed citations
7.
Zhang, Liya, Ying Hu, Min Xie, et al.. (2023). Carnitine-acylcarnitine translocase deficiency caused by SLC25A20 gene heterozygous variants in twins: a case report. Journal of International Medical Research. 51(4). 3639224739–3639224739. 2 indexed citations
8.
Wang, Zihang, et al.. (2022). MinimapR: A parallel alignment tool for the analysis of large-scale third-generation sequencing data. Computational Biology and Chemistry. 99. 107735–107735. 9 indexed citations
9.
Cui, Yingbo, Zihang Wang, Johannes Köster, et al.. (2021). VISPR-online: a web-based interactive tool to visualize CRISPR screening experiments. BMC Bioinformatics. 22(1). 344–344. 1 indexed citations
10.
Cui, Yingbo, Ang Zhang, Tao Tang, et al.. (2021). A Review of Parallel Implementations for the Smith–Waterman Algorithm. Interdisciplinary Sciences Computational Life Sciences. 14(1). 1–14. 22 indexed citations
11.
Cui, Yingbo, Xiangke Liao, Shaoliang Peng, et al.. (2020). OffScan: a universal and fast CRISPR off-target sites detection tool. BMC Genomics. 21(S1). 872–872. 13 indexed citations
12.
Wang, Binbin, Mei Wang, Wubing Zhang, et al.. (2019). Integrative analysis of pooled CRISPR genetic screens using MAGeCKFlute. Nature Protocols. 14(3). 756–780. 236 indexed citations
13.
Cui, Yingbo, et al.. (2018). Review of CRISPR/Cas9 sgRNA Design Tools. Interdisciplinary Sciences Computational Life Sciences. 10(2). 455–465. 172 indexed citations
14.
Peng, Shaoliang, Kai‐Wen Huang, Yingbo Cui, et al.. (2018). Efficient computation of motif discovery on Intel Many Integrated Core (MIC) Architecture. BMC Bioinformatics. 19(S9). 282–282. 8 indexed citations
15.
Cui, Yingbo, Shaoliang Peng, Yutong Lu, et al.. (2018). mSNP: A Massively Parallel Algorithm for Large-Scale SNP Detection. IEEE Transactions on Parallel and Distributed Systems. 29(11). 2557–2567. 5 indexed citations
16.
Peng, Shaoliang, et al.. (2017). A CPU/MIC Collaborated Parallel Framework for GROMACS on Tianhe-2 Supercomputer. IEEE/ACM Transactions on Computational Biology and Bioinformatics. 16(2). 425–433. 12 indexed citations
17.
Zhang, Feng, Xiangke Liao, Shaoliang Peng, et al.. (2015). A Hybrid Parallel Strategy Based on String Graph Theory to Improve De Novo DNA Assembly on the TianHe-2 Supercomputer. Interdisciplinary Sciences Computational Life Sciences. 8(2). 169–176. 1 indexed citations
18.
Zhu, Xiaoqian, Shaoliang Peng, Yingbo Cui, et al.. (2015). A Massively Parallel Computational Method of Reading Index Files for SOAPsnv. Interdisciplinary Sciences Computational Life Sciences. 7(4). 397–404. 1 indexed citations
19.
Cui, Yingbo, Xiangke Liao, Xiaoqian Zhu, Bingqiang Wang, & Shaoliang Peng. (2015). B-MIC: An Ultrafast Three-Level Parallel Sequence Aligner Using MIC. Interdisciplinary Sciences Computational Life Sciences. 8(1). 28–34. 2 indexed citations
20.
Peng, Shaoliang, Xiangke Liao, Canqun Yang, et al.. (2015). The Challenge of Scaling Genome Big Data Analysis Software on TH-2 Supercomputer. 823–828.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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