Tomotaka Oroguchi

1.2k total citations
43 papers, 725 citations indexed

About

Tomotaka Oroguchi is a scholar working on Molecular Biology, Radiation and Materials Chemistry. According to data from OpenAlex, Tomotaka Oroguchi has authored 43 papers receiving a total of 725 indexed citations (citations by other indexed papers that have themselves been cited), including 24 papers in Molecular Biology, 21 papers in Radiation and 18 papers in Materials Chemistry. Recurrent topics in Tomotaka Oroguchi's work include Advanced X-ray Imaging Techniques (18 papers), Enzyme Structure and Function (17 papers) and X-ray Spectroscopy and Fluorescence Analysis (15 papers). Tomotaka Oroguchi is often cited by papers focused on Advanced X-ray Imaging Techniques (18 papers), Enzyme Structure and Function (17 papers) and X-ray Spectroscopy and Fluorescence Analysis (15 papers). Tomotaka Oroguchi collaborates with scholars based in Japan, Germany and France. Tomotaka Oroguchi's co-authors include Masayoshi Nakasako, Mitsunori Ikeguchi, Yuki Sekiguchi, Yuki Takayama, Masaki Yamamoto, Amane Kobayashi, Koji Okajima, Mamoru Sato, Toshiyuki Shimizu and Hiroshi Hashimoto and has published in prestigious journals such as Journal of the American Chemical Society, Journal of Biological Chemistry and The Journal of Chemical Physics.

In The Last Decade

Tomotaka Oroguchi

43 papers receiving 717 citations

Peers

Tomotaka Oroguchi

RADIA

Yuki Takayama Japan

Mark S. Hunter United States

Shenglan Xu United States

Karol Nass Germany

Lorenzo Galli Germany

Britta Weinhausen Germany

Naranbaatar Dashdorj United States

Sabine Botha United States

Derek W. Yoder United States

Iosifina Sarrou United States

Yuki Takayama Japan

Tomotaka Oroguchi

90 ×0.3

273 ×0.9

RADIA

154 ×0.6

151 ×0.7

45 ×0.5

Citations per year, relative to Tomotaka Oroguchi Tomotaka Oroguchi (= 1×) peers Yuki Takayama

Countries citing papers authored by Tomotaka Oroguchi

Since Specialization

Citations

This map shows the geographic impact of Tomotaka Oroguchi's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Tomotaka Oroguchi with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Tomotaka Oroguchi more than expected).

Fields of papers citing papers by Tomotaka Oroguchi

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Tomotaka Oroguchi. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Tomotaka Oroguchi. The network helps show where Tomotaka Oroguchi may publish in the future.

Co-authorship network of co-authors of Tomotaka Oroguchi

This figure shows the co-authorship network connecting the top 25 collaborators of Tomotaka Oroguchi. A scholar is included among the top collaborators of Tomotaka Oroguchi based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Tomotaka Oroguchi. Tomotaka Oroguchi is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

Oroguchi, Tomotaka, Oda T, B. Farago, et al.. (2023). Internal dynamics of multidomain protein as revealed by an optimized neutron spin echo measurement and all-atom molecular dynamics simulation. Physical Review Research. 5(4). 4 indexed citations

Kobayashi, Amane, Yuki Takayama, Takeshi Hirakawa, et al.. (2021). Common architectures in cyanobacteria Prochlorococcus cells visualized by X-ray diffraction imaging using X-ray free electron laser. Scientific Reports. 11(1). 3877–3877. 7 indexed citations

Nakasako, Masayoshi, Amane Kobayashi, Yuki Takayama, et al.. (2020). Methods and application of coherent X-ray diffraction imaging of noncrystalline particles. Biophysical Reviews. 12(2). 541–567. 10 indexed citations

Oroguchi, Tomotaka, et al.. (2019). Dipole–dipole interactions between tryptophan side chains and hydration water molecules dominate the observed dynamic stokes shift of lysozyme. Biochimica et Biophysica Acta (BBA) - General Subjects. 1864(2). 129406–129406. 6 indexed citations

Kobayashi, Amane, Yuki Takayama, Koji Okajima, et al.. (2018). Diffraction apparatus and procedure in tomography X-ray diffraction imaging for biological cells at cryogenic temperature using synchrotron X-ray radiation. Journal of Synchrotron Radiation. 25(6). 1803–1818. 10 indexed citations

Sekiguchi, Yuki, et al.. (2018). Classification of ab initio models of proteins restored from small-angle X-ray scattering. Journal of Synchrotron Radiation. 25(5). 1379–1388. 7 indexed citations

Kobayashi, Amane, Yuki Sekiguchi, Tomotaka Oroguchi, Masaki Yamamoto, & Masayoshi Nakasako. (2018). Shot-by-shot characterization of focused X-ray free electron laser pulses. Scientific Reports. 8(1). 831–831. 14 indexed citations

Oroguchi, Tomotaka & Masayoshi Nakasako. (2017). Influences of lone-pair electrons on directionality of hydrogen bonds formed by hydrophilic amino acid side chains in molecular dynamics simulation. Scientific Reports. 7(1). 15859–15859. 14 indexed citations

Oroguchi, Tomotaka & Masayoshi Nakasako. (2016). Changes in hydration structure are necessary for collective motions of a multi-domain protein. Scientific Reports. 6(1). 26302–26302. 39 indexed citations

10.

Kameda, Hiroshi, Naoya Fukui, Kunihiro Hongo, et al.. (2016). Common structural features of toxic intermediates from α-synuclein and GroES fibrillogenesis detected using cryogenic coherent X-ray diffraction imaging. The Journal of Biochemistry. 161(1). 55–65. 6 indexed citations

11.

Okajima, Koji, Sachiko Kashojiya, Yuki Takayama, et al.. (2016). Blue Light-excited Light-Oxygen-Voltage-sensing Domain 2 (LOV2) Triggers a Rearrangement of the Kinase Domain to Induce Phosphorylation Activity in Arabidopsis Phototropin1. Journal of Biological Chemistry. 291(38). 19975–19984. 13 indexed citations

12.

Kobayashi, Amane, Yuki Sekiguchi, Yuki Takayama, et al.. (2016). TAKASAGO-6 apparatus for cryogenic coherent X-ray diffraction imaging of biological non-crystalline particles using X-ray free electron laser at SACLA. Review of Scientific Instruments. 87(5). 53109–53109. 15 indexed citations

13.

Yoshidome, Takashi, Tomotaka Oroguchi, Masayoshi Nakasako, & Mitsunori Ikeguchi. (2015). Classification of projection images of proteins with structural polymorphism by manifold: A simulation study for x-ray free-electron laser diffraction imaging. Physical Review E. 92(3). 32710–32710. 12 indexed citations

14.

Sekiguchi, Yuki, Tomotaka Oroguchi, & Masayoshi Nakasako. (2015). Classification and assessment of retrieved electron density maps in coherent X-ray diffraction imaging using multivariate analysis. Journal of Synchrotron Radiation. 23(1). 312–323. 23 indexed citations

15.

Takayama, Yuki, Saori Maki-Yonekura, Tomotaka Oroguchi, Masayoshi Nakasako, & Koji Yonekura. (2015). Signal enhancement and Patterson-search phasing for high-spatial-resolution coherent X-ray diffraction imaging of biological objects. Scientific Reports. 5(1). 8074–8074. 19 indexed citations

16.

Oroguchi, Tomotaka & Masayoshi Nakasako. (2013). Three-dimensional structure determination protocol for noncrystalline biomolecules using x-ray free-electron laser diffraction imaging. Physical Review E. 87(2). 22712–22712. 33 indexed citations

17.

Okajima, Koji, Yusuke Aihara, Yuki Takayama, et al.. (2013). Light-induced Conformational Changes of LOV1 (Light Oxygen Voltage-sensing Domain 1) and LOV2 Relative to the Kinase Domain and Regulation of Kinase Activity in Chlamydomonas Phototropin. Journal of Biological Chemistry. 289(1). 413–422. 38 indexed citations

18.

Murayama, Yasuto, N. Kuwabara, Tomotaka Oroguchi, et al.. (2011). Fission Yeast Swi5-Sfr1 Protein Complex, an Activator of Rad51 Recombinase, Forms an Extremely Elongated Dogleg-shaped Structure. Journal of Biological Chemistry. 286(50). 43569–43576. 26 indexed citations

19.

Oroguchi, Tomotaka, Mitsunori Ikeguchi, Motonori Ota, Kunihiro Kuwajima, & Akinori Kidera. (2007). Unfolding Pathways of Goat α-Lactalbumin as Revealed in Multiple Alignment of Molecular Dynamics Trajectories. Journal of Molecular Biology. 371(5). 1354–1364. 5 indexed citations

20.

Maki, Kosuke, Tomonao Inobe, Kazunobu Takahashi, et al.. (2006). The Equilibrium Unfolding Intermediate Observed at pH 4 and its Relationship with the Kinetic Folding Intermediates in Green Fluorescent Protein. Journal of Molecular Biology. 361(5). 969–982. 38 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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