Tjaart de Beer

16.0k citations

25 papers · 10.7k indexed · 2 hit papers · h-index 14

Co-authors: Torsten Schwede Stefan Bienert Lorenza Bordoli Andrew Waterhouse Gerardo Tauriello Gabriel Studer Rosalba Lepore Florian Heer
Topics: Protein Structure and Dynamics (7 papers)Bioinformatics and Genomic Networks (7 papers)Viral Infections and Immunology Research (6 papers)
Cited by: Molecular Biology Biotechnology Infectious Diseases
Journals: Nucleic Acids Research PLoS ONE Scientific Reports
Partner nations: United Kingdom South Africa United States

In The Last Decade

Tjaart de Beer

25 papers receiving 10.6k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

SWISS-MODEL: homology modelling of protein structures and complexes

2018 8.7k citations Andrew Waterhouse, Martino Bertoni et al. Nucleic Acids Research profile →
The SWISS-MODEL Repository—new features and functionality

2016 1.2k citations Stefan Bienert, Andrew Waterhouse et al. Nucleic Acids Research profile →

Peers

Replace Gerardo Tauriello with:

Gerardo Tauriello Switzerland

Rafal Gumienny Switzerland

Rosalba Lepore Italy

Christine Rempfer Germany

Florian Heer Switzerland

Mark N. Wass United Kingdom

Nicolas Guex Switzerland

Martino Bertoni Switzerland

Konstantin Arnold Switzerland

Stefan Bienert Switzerland

Tjaart de Beer relative to Gerardo Tauriello Switzerland Gerardo Tauriello's profile →

Citations per field

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Gerardo Tauriello · 1×

×1.0 7k/6k

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×1.0 1k/1k

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×1.1 1k/938

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×1.0 799/778

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Countries citing papers authored by Tjaart de Beer

Since Specialization

Citations

This map shows the geographic impact of Tjaart de Beer's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Tjaart de Beer with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Tjaart de Beer more than expected).

Fields of papers citing papers by Tjaart de Beer

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Tjaart de Beer. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Tjaart de Beer. The network helps show where Tjaart de Beer may publish in the future.

Co-authorship network of co-authors of Tjaart de Beer

This figure shows the co-authorship network connecting the top 25 collaborators of Tjaart de Beer. A scholar is included among the top collaborators of Tjaart de Beer based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Tjaart de Beer. Tjaart de Beer is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

#	Work	Indexed citations
1	SWISS-MODEL: homology modelling of protein structures and complexesbreakdown → 2018 ·Nucleic Acids Research ·Andrew Waterhouse,Martino Bertoni,Stefan Bienert,Gabriel Studer,Gerardo Tauriello,Rafal Gumienny,Florian Heer,Tjaart de Beer,Christine Rempfer,Lorenza Bordoli,Rosalba Lepore,Torsten Schwede	8674
2	A computational protocol to evaluate the effects of protein mutants in the kinase gatekeeper position on the binding of ATP substrate analogues 2017 ·BMC Research Notes ·Valentina Romano,Tjaart de Beer,Torsten Schwede	7
3	Common sequence variants affect molecular function more than rare variants? 2017 ·Scientific Reports ·Yannick Mahlich,Jonas Reeb,Maximilian Hecht,(unknown),Tjaart de Beer,Yana Bromberg,Burkhard Rost	16
4	The SWISS-MODEL Repository—new features and functionalitybreakdown → 2016 ·Nucleic Acids Research ·Stefan Bienert,Andrew Waterhouse,Tjaart de Beer,Gerardo Tauriello,Gabriel Studer,Lorenza Bordoli,Torsten Schwede	1189
5	The BID Domain of Type IV Secretion Substrates Forms a Conserved Four-Helix Bundle Topped with a Hook 2016 ·Structure ·Frédéric V. Stanger,Tjaart de Beer,David M. Dranow,Tilman Schirmer,Isabelle Phan,Christoph Dehio	13
6	Insight into Neutral and Disease-Associated Human Genetic Variants through Interpretable Predictors 2015 ·PLoS ONE ·(unknown),Marcel Reinders,Dick de Ridder,Tjaart de Beer	2
7	Synthesis of empty african horse sickness virus particles 2015 ·Virus Research ·(unknown),Francois F. Maree,John F. Putterill,Tjaart de Beer,(unknown),Jacques Theron	17
8	Determination of common genetic variants within the non-structural proteins of foot-and-mouth disease viruses isolated in sub-Saharan Africa 2015 ·Veterinary Microbiology ·(unknown),Tjaart de Beer,(unknown),(unknown),Wilna Vosloo,Francois F. Maree	6
9	LigSearch: a knowledge-based web server to identify likely ligands for a protein target 2013 ·Acta Crystallographica Section D Biological Crystallography ·Tjaart de Beer,Roman A. Laskowski,(unknown),A. W. Edith Chan,W.F. Anderson,Janet M. Thornton	2
10	Analysis of SAT Type Foot-And-Mouth Disease Virus Capsid Proteins and the Identification of Putative Amino Acid Residues Affecting Virus Stability 2013 ·PLoS ONE ·Francois F. Maree,Belinda Blignaut,Tjaart de Beer,Elizabeth Rieder	23
11	Amino Acid Changes in Disease-Associated Variants Differ Radically from Variants Observed in the 1000 Genomes Project Dataset 2013 ·PLoS Computational Biology ·Tjaart de Beer,Roman A. Laskowski,(unknown),Botond Sipos,Nick Goldman,Janet M. Thornton	50
12	The Catalytic Site Atlas 2.0: cataloging catalytic sites and residues identified in enzymes 2013 ·Nucleic Acids Research ·Nicholas Furnham,Gemma L. Holliday,Tjaart de Beer,Julius O.B. Jacobsen,William R. Pearson,Janet M. Thornton	137
13	PDBsum additions 2013 ·Nucleic Acids Research ·Tjaart de Beer,Karel Berka,Janet M. Thornton,Roman A. Laskowski	241
14	Current challenges in genome annotation through structural biology and bioinformatics 2012 ·Current Opinion in Structural Biology ·Nicholas Furnham,Tjaart de Beer,Janet M. Thornton	10
15	1,000 structures and more from the MCSG 2011 ·BMC Structural Biology ·David Lee,Tjaart de Beer,Roman A. Laskowski,Janet M. Thornton,Christine Orengo	13
16	Mapping of amino acid residues responsible for adhesion of cell culture-adapted foot-and-mouth disease SAT type viruses 2010 ·Virus Research ·Francois F. Maree,Belinda Blignaut,Tjaart de Beer,N Visser,Elizabeth Rieder	41
17	Sequence-Based Prediction for Vaccine Strain Selection and Identification of Antigenic Variability in Foot-and-Mouth Disease Virus 2010 ·PLoS Computational Biology ·Richard Reeve,Belinda Blignaut,J J Esterhuysen,(unknown),Louise Matthews,Elizabeth E. Fry,Tjaart de Beer,Jacques Theron,Elizabeth Rieder,Wilna Vosloo,Hester G. O’Neill,Daniel T. Haydon,Francois F. Maree	58
18	The Malarial Drug Target Plasmodium falciparum 1-Deoxy-D-Xylulose-5- Phosphate Reductoisomerase (PfDXR): Development of a 3-D Model for Identification of Novel, Structural and Functional Features and for Inhibitor Screening (Supplementary Information) 2009 ·Protein and Peptide Letters ·(unknown),(unknown),Tjaart de Beer,Linda L. Stephens,Gregory L. Blatch	13
19	Protein homology modelling and its use in South Africa 2008 ·South African Journal of Science ·Özlem Taştan Bishop,Tjaart de Beer,Fourie Joubert	12
20	Structure-Function Study of a Plasmodium falciparum Hsp70 Using Three Dimensional Modelling and in Vitro Analyses 2008 ·Protein and Peptide Letters ·Addmore Shonhai,(unknown),Tjaart de Beer,Aileen Boshoff,Gregory L. Blatch	48

About Tjaart de Beer

Tjaart de Beer is a scholar working on Agronomy and Crop Science, Parasitology and Cardiology and Cardiovascular Medicine, having authored 25 papers that have together received 10.7k indexed citations. Recurring topics across this work include Protein Structure and Dynamics (7 papers), Bioinformatics and Genomic Networks (7 papers) and Viral Infections and Immunology Research (6 papers). The work is most often cited by research in Molecular Biology (6.5k citations), Biotechnology (660 citations) and Infectious Diseases (1.1k citations). Tjaart de Beer has collaborated with scholars based in United Kingdom, South Africa and United States. Frequent co-authors include Torsten Schwede, Stefan Bienert, Lorenza Bordoli, Andrew Waterhouse, Gerardo Tauriello, Gabriel Studer, Rosalba Lepore, Florian Heer, Martino Bertoni and Rafal Gumienny. Their work appears in journals such as Nucleic Acids Research, PLoS ONE and Scientific Reports.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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