Thomas J. Nicholas

1.6k total citations
15 papers, 844 citations indexed

About

Thomas J. Nicholas is a scholar working on Molecular Biology, Genetics and Cell Biology. According to data from OpenAlex, Thomas J. Nicholas has authored 15 papers receiving a total of 844 indexed citations (citations by other indexed papers that have themselves been cited), including 10 papers in Molecular Biology, 10 papers in Genetics and 2 papers in Cell Biology. Recurrent topics in Thomas J. Nicholas's work include Genomics and Rare Diseases (7 papers), Genomic variations and chromosomal abnormalities (5 papers) and CRISPR and Genetic Engineering (2 papers). Thomas J. Nicholas is often cited by papers focused on Genomics and Rare Diseases (7 papers), Genomic variations and chromosomal abnormalities (5 papers) and CRISPR and Genetic Engineering (2 papers). Thomas J. Nicholas collaborates with scholars based in United States, Australia and Netherlands. Thomas J. Nicholas's co-authors include Joshua M. Akey, Evan E. Eichler, Jennifer Madeoy, Aaron K. Wong, Caitlin Connelly, Dayna T. Akey, Alison L. Ruhe, Mark W. Neff, Katrina L. Mealey and Ze Cheng and has published in prestigious journals such as Proceedings of the National Academy of Sciences, Hepatology and Nature Methods.

In The Last Decade

Thomas J. Nicholas

14 papers receiving 817 citations

Peers

Thomas J. Nicholas

GENET

AGING

Anne Segonds-Pichon United Kingdom

Changde Cheng United States

Jan Provazník Germany

Rolando Rivera‐Pomar Argentina

Wenfang Tan United States

Felix Horns United States

Péter Vilmos Hungary

Émilie Brasset France

Matthew McNeill United States

M. Jordan Rowley United States

Anne Segonds-Pichon United Kingdom

Thomas J. Nicholas

340 ×0.7

GENET

872 ×2.2

52 ×0.3

23 ×0.2

AGING

64 ×0.8

Citations per year, relative to Thomas J. Nicholas Thomas J. Nicholas (= 1×) peers Anne Segonds-Pichon

Countries citing papers authored by Thomas J. Nicholas

Since Specialization

Citations

This map shows the geographic impact of Thomas J. Nicholas's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Thomas J. Nicholas with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Thomas J. Nicholas more than expected).

Fields of papers citing papers by Thomas J. Nicholas

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Thomas J. Nicholas. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Thomas J. Nicholas. The network helps show where Thomas J. Nicholas may publish in the future.

Co-authorship network of co-authors of Thomas J. Nicholas

This figure shows the co-authorship network connecting the top 25 collaborators of Thomas J. Nicholas. A scholar is included among the top collaborators of Thomas J. Nicholas based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Thomas J. Nicholas. Thomas J. Nicholas is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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15 of 15 papers shown

Wen, Ting, Steven E. Boyden, Robert G. Lewis, et al.. (2025). Identification of 2 novel noncoding variants in patients with Diamond-Blackfan anemia syndrome by whole genome sequencing. Blood Advances. 9(10). 2443–2452.

Tafaleng, Edgar N., Jie Li, Yan Wang, et al.. (2024). Variants in autophagy genes MTMR12 and FAM134A are putative modifiers of the hepatic phenotype in α1-antitrypsin deficiency. Hepatology. 80(4). 859–871. 3 indexed citations

Longo, Nicola, Robert G. Lewis, Thomas J. Nicholas, et al.. (2024). Novel molecular mechanism in Malan syndrome uncovered through genome sequencing reanalysis, exon‐level Array, and RNA sequencing. American Journal of Medical Genetics Part A. 194(5). e63516–e63516. 1 indexed citations

Khan, Muhammad Riaz, Thomas J. Nicholas, Muhammad Ajmal, et al.. (2023). Genome sequencing of Pakistani families with male infertility identifies deleterious genotypes in SPAG6, CCDC9, TKTL1, TUBA3C, and M1AP. Andrology. 13(5). 1093–1104. 10 indexed citations

Wen, Ting, Andrew Farrell, Rong Mao, et al.. (2022). Rapid genome sequencing identifies a novel de novoSNAP25variant for neonatal congenital myasthenic syndrome. Molecular Case Studies. 8(7). a006242–a006242. 5 indexed citations

Nicholas, Thomas J., et al.. (2022). Annotation of structural variants with reported allele frequencies and related metrics from multiple datasets using SVAFotate. BMC Bioinformatics. 23(1). 490–490. 10 indexed citations

Belyeu, Jonathan R., Harrison Brand, Harold Wang, et al.. (2021). De novo structural mutation rates and gamete-of-origin biases revealed through genome sequencing of 2,396 families. The American Journal of Human Genetics. 108(4). 597–607. 50 indexed citations

Farrell, Michael, Jeyran Shahbazi, Marianne Byrne, et al.. (2021). Outcomes of a single-arm implementation trial of extended-release subcutaneous buprenorphine depot injections in people with opioid dependence. International Journal of Drug Policy. 100. 103492–103492. 32 indexed citations

高橋, 義行, Xiaomeng Huang, Dillon Lee, et al.. (2018). Abstract 3280: Utah somatic variant calling pipeline featuring multi-sample joint calling, variant-graph based accurate allele frequency estimation and subclone analysis. Cancer Research. 78(13_Supplement). 3280–3280. 1 indexed citations

10.

Holstege, Henne, Wayne Pfeiffer, Daoud Sie, et al.. (2014). Somatic mutations found in the healthy blood compartment of a 115-yr-old woman demonstrate oligoclonal hematopoiesis. Genome Research. 24(5). 733–742. 97 indexed citations

11.

Nicholas, Thomas J., Carl Baker, Evan E. Eichler, & Joshua M. Akey. (2011). A high-resolution integrated map of copy number polymorphisms within and between breeds of the modern domesticated dog. BMC Genomics. 12(1). 414–414. 69 indexed citations

12.

Akey, Joshua M., Alison L. Ruhe, Dayna T. Akey, et al.. (2010). Tracking footprints of artificial selection in the dog genome. Proceedings of the National Academy of Sciences. 107(3). 1160–1165. 247 indexed citations

13.

Nicholas, Thomas J., Ze Cheng, Mario Ventura, et al.. (2009). The genomic architecture of segmental duplications and associated copy number variants in dogs. Genome Research. 19(3). 491–499. 122 indexed citations

14.

Nicholas, Thomas J., Ze Cheng, Katrina L. Mealey, Evan E. Eichler, & Joshua M. Akey. (2009). The genomic architecture of segmental duplications and copy number variants in dogs. Journal of Veterinary Behavior. 4(2). 71–72. 45 indexed citations

15.

Murray, John I., Zhirong Bao, Thomas J. Boyle, et al.. (2008). Automated analysis of embryonic gene expression with cellular resolution in C. elegans. Nature Methods. 5(8). 703–709. 152 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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