Thomas Boudier

4.4k total citations · 1 hit paper
55 papers, 2.9k citations indexed

About

Thomas Boudier is a scholar working on Molecular Biology, Biophysics and Structural Biology. According to data from OpenAlex, Thomas Boudier has authored 55 papers receiving a total of 2.9k indexed citations (citations by other indexed papers that have themselves been cited), including 29 papers in Molecular Biology, 14 papers in Biophysics and 10 papers in Structural Biology. Recurrent topics in Thomas Boudier's work include Cell Image Analysis Techniques (12 papers), Advanced Electron Microscopy Techniques and Applications (10 papers) and Genomics and Chromatin Dynamics (7 papers). Thomas Boudier is often cited by papers focused on Cell Image Analysis Techniques (12 papers), Advanced Electron Microscopy Techniques and Applications (10 papers) and Genomics and Chromatin Dynamics (7 papers). Thomas Boudier collaborates with scholars based in France, Singapore and United States. Thomas Boudier's co-authors include Christophe Escudé, Jean Ollion, François Loll, Sergio Marco, Carlos Óscar S. Sorzano, Jean‐Pierre Lechaire, Simon Scheuring, Serge Marty, Philippe Rostaing and Eckart D. Gundelfinger and has published in prestigious journals such as Nature, Proceedings of the National Academy of Sciences and Nucleic Acids Research.

In The Last Decade

Thomas Boudier

55 papers receiving 2.9k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

TANGO: a generic tool for high-throughput 3D image analysis for studying nuclear organization

2013 566 citations Jean Ollion, François Loll et al. Bioinformatics profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Thomas Boudier France	24	1.5k	572	447	285	242	55	2.9k
C. Shan Xu United States	21	1.5k 1.0×	695 1.2×	476 1.1×	499 1.8×	454 1.9×	49	3.0k
Oliver Biehlmaier Switzerland	18	1.1k 0.7×	614 1.1×	377 0.8×	529 1.9×	185 0.8×	29	2.1k
Anna Kreshuk Germany	21	1.1k 0.7×	314 0.5×	262 0.6×	1.1k 3.9×	351 1.5×	39	3.1k
Franz Oswald Germany	37	3.4k 2.3×	450 0.8×	408 0.9×	930 3.3×	193 0.8×	105	5.3k
Nicole L. Schieber Germany	31	2.0k 1.3×	1.0k 1.8×	266 0.6×	277 1.0×	290 1.2×	46	4.1k
Christoph Straehle Germany	8	1.1k 0.7×	313 0.5×	213 0.5×	1.0k 3.6×	223 0.9×	10	2.9k
W. B. Amos United Kingdom	19	961 0.6×	415 0.7×	183 0.4×	683 2.4×	74 0.3×	40	2.1k
David Sprinzak Israel	28	2.1k 1.4×	569 1.0×	242 0.5×	89 0.3×	84 0.3×	53	3.9k
Guillaume Jacquemet Finland	31	1.6k 1.1×	1.5k 2.6×	141 0.3×	454 1.6×	85 0.4×	59	3.7k

Countries citing papers authored by Thomas Boudier

Since Specialization

Citations

This map shows the geographic impact of Thomas Boudier's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Thomas Boudier with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Thomas Boudier more than expected).

Fields of papers citing papers by Thomas Boudier

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Thomas Boudier. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Thomas Boudier. The network helps show where Thomas Boudier may publish in the future.

Co-authorship network of co-authors of Thomas Boudier

This figure shows the co-authorship network connecting the top 25 collaborators of Thomas Boudier. A scholar is included among the top collaborators of Thomas Boudier based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Thomas Boudier. Thomas Boudier is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

Fernández, I., Fidan Sumbul, Claire Valotteau, et al.. (2025). Modulation of SARS-CoV-2 spike binding to ACE2 through conformational selection. Nature Nanotechnology. 20(7). 926–934. 1 indexed citations

Shen, Yiling, et al.. (2024). Orphan nuclear receptors-induced ALT-associated PML bodies are targets for ALT inhibition. Nucleic Acids Research. 52(11). 6472–6489. 3 indexed citations

Boudier, Thomas, et al.. (2022). CardioVinci: building blocks for virtual cardiac cells using deep learning. Philosophical Transactions of the Royal Society B Biological Sciences. 377(1864). 20210469–20210469. 3 indexed citations

Ratnayake, Dhanushika, Phong D. Nguyen, Fernando J. Rossello, et al.. (2021). Macrophages provide a transient muscle stem cell niche via NAMPT secretion. Nature. 591(7849). 281–287. 154 indexed citations

Boudier, Thomas, et al.. (2020). EM-stellar: benchmarking deep learning for electron microscopy image segmentation. Bioinformatics. 37(1). 97–106. 15 indexed citations

Boudier, Thomas, et al.. (2019). A novel generic dictionary-based denoising method for improving noisy and densely packed nuclei segmentation in 3D time-lapse fluorescence microscopy images. Scientific Reports. 9(1). 5654–5654. 12 indexed citations

Quéguiner, Isabelle, Agnieszka Kolano, Thomas Boudier, et al.. (2018). Shifting meiotic to mitotic spindle assembly in oocytes disrupts chromosome alignment. EMBO Reports. 19(2). 368–381. 30 indexed citations

Santos, Marc Dos, Marine Salery, Benoît Forget, et al.. (2017). Rapid Synaptogenesis in the Nucleus Accumbens Is Induced by a Single Cocaine Administration and Stabilized by Mitogen-Activated Protein Kinase Interacting Kinase-1 Activity. Biological Psychiatry. 82(11). 806–818. 23 indexed citations

Ollion, Jean, et al.. (2015). Proliferation-dependent positioning of individual centromeres in the interphase nucleus of human lymphoblastoid cell lines. Molecular Biology of the Cell. 26(13). 2550–2560. 10 indexed citations

10.

Heck, Nicolas, Marc Dos Santos, Marine Salery, et al.. (2014). A new automated 3D detection of synaptic contacts reveals the formation of cortico-striatal synapses upon cocaine treatment in vivo. Brain Structure and Function. 220(5). 2953–2966. 23 indexed citations

11.

Ollion, Jean, et al.. (2014). Analysis of Nuclear Organization with TANGO, Software for High-Throughput Quantitative Analysis of 3D Fluorescence Microscopy Images. Methods in molecular biology. 1228. 203–222. 9 indexed citations

12.

Ollion, Jean, et al.. (2013). TANGO: a generic tool for high-throughput 3D image analysis for studying nuclear organization. Bioinformatics. 29(14). 1840–1841. 566 indexed citations breakdown →

13.

Baudoin, Jean‐Pierre, Camilla Luccardini, Sergio Espeso‐Gil, et al.. (2012). Tangentially Migrating Neurons Assemble a Primary Cilium that Promotes Their Reorientation to the Cortical Plate. Neuron. 76(6). 1108–1122. 110 indexed citations

14.

Colom, Adai, Ignacio Casuso, Thomas Boudier, & Simon Scheuring. (2012). High-Speed Atomic Force Microscopy: Cooperative Adhesion and Dynamic Equilibrium of Junctional Microdomain Membrane Proteins. Journal of Molecular Biology. 423(2). 249–256. 27 indexed citations

15.

Ernoult‐Lange, Michèle, Sonia Baconnais, Maryannick Harper, et al.. (2012). Multiple binding of repressed mRNAs by the P-body protein Rck/p54. RNA. 18(9). 1702–1715. 74 indexed citations

16.

Boudier, Thomas, et al.. (2009). Structural Information, Resolution, and Noise in High-Resolution Atomic Force Microscopy Topographs. Biophysical Journal. 96(9). 3822–3831. 48 indexed citations

17.

Boudier, Thomas, et al.. (2007). TomoJ: tomography software for three-dimensional reconstruction in transmission electron microscopy. BMC Bioinformatics. 8(1). 288–288. 256 indexed citations

18.

Rostaing, Philippe, Éléonore Réal, Léa Siksou, et al.. (2006). Analysis of synaptic ultrastructure without fixative using high‐pressure freezing and tomography. European Journal of Neuroscience. 24(12). 3463–3474. 110 indexed citations

19.

Messaoudi, Cédric, et al.. (2005). Smart 3D‐fish: Automation of distance analysis in nuclei of interphase cells by image processing. Cytometry Part A. 67A(1). 18–26. 40 indexed citations

20.

Marco, Sergio, Thomas Boudier, Cédric Messaoudi, & Jean Louis Rigaud. (2004). Electron tomography of biological samples. Biochemistry (Moscow). 69(11). 1219–1225. 25 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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