Thomas Anantharaman

6.0k total citations
40 papers, 1.2k citations indexed

About

Thomas Anantharaman is a scholar working on Molecular Biology, Artificial Intelligence and Genetics. According to data from OpenAlex, Thomas Anantharaman has authored 40 papers receiving a total of 1.2k indexed citations (citations by other indexed papers that have themselves been cited), including 24 papers in Molecular Biology, 12 papers in Artificial Intelligence and 5 papers in Genetics. Recurrent topics in Thomas Anantharaman's work include Genomics and Phylogenetic Studies (13 papers), Genetics, Bioinformatics, and Biomedical Research (8 papers) and Algorithms and Data Compression (6 papers). Thomas Anantharaman is often cited by papers focused on Genomics and Phylogenetic Studies (13 papers), Genetics, Bioinformatics, and Biomedical Research (8 papers) and Algorithms and Data Compression (6 papers). Thomas Anantharaman collaborates with scholars based in United States, China and United Kingdom. Thomas Anantharaman's co-authors include David C. Schwartz, Bud Mishra, Murray Campbell, Feng-hsiung Hsu, Junping Jing, Christopher E. Aston, Brajendra Mishra, Andreas Nowatzyk, Virginia Clarke and Edward J. Huff and has published in prestigious journals such as Nature, Science and Proceedings of the National Academy of Sciences.

In The Last Decade

Thomas Anantharaman

38 papers receiving 1.2k citations

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name h Career Trend Papers Cites
Thomas Anantharaman United States 17 634 217 196 176 160 40 1.2k
Peter Dittrich Germany 25 1.2k 1.9× 139 0.6× 142 0.7× 178 1.0× 220 1.4× 102 2.0k
Tomáš Gedeon United States 21 684 1.1× 92 0.4× 56 0.3× 203 1.2× 89 0.6× 107 1.4k
Eshel Ben Jacob Israel 16 493 0.8× 220 1.0× 112 0.6× 192 1.1× 27 0.2× 20 1.1k
Sergei Nechaev Russia 20 937 1.5× 146 0.7× 112 0.6× 355 2.0× 35 0.2× 114 2.0k
Hervé Isambert France 23 1.3k 2.1× 398 1.8× 100 0.5× 209 1.2× 43 0.3× 47 2.2k
Maximino Aldana Mexico 20 1.3k 2.0× 143 0.7× 90 0.5× 446 2.5× 94 0.6× 38 2.1k
Javier Buceta Spain 23 525 0.8× 197 0.9× 47 0.2× 137 0.8× 15 0.1× 65 1.3k
William Rowe United Kingdom 25 897 1.4× 169 0.8× 49 0.3× 235 1.3× 58 0.4× 55 1.5k
Jonathan M. Keith Australia 25 820 1.3× 51 0.2× 182 0.9× 247 1.4× 125 0.8× 89 1.7k
Kazuhiro Takemoto Japan 21 892 1.4× 106 0.5× 110 0.6× 170 1.0× 219 1.4× 83 1.8k

Countries citing papers authored by Thomas Anantharaman

Since Specialization
Citations

This map shows the geographic impact of Thomas Anantharaman's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Thomas Anantharaman with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Thomas Anantharaman more than expected).

Fields of papers citing papers by Thomas Anantharaman

Since Specialization
Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Thomas Anantharaman. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Thomas Anantharaman. The network helps show where Thomas Anantharaman may publish in the future.

Co-authorship network of co-authors of Thomas Anantharaman

This figure shows the co-authorship network connecting the top 25 collaborators of Thomas Anantharaman. A scholar is included among the top collaborators of Thomas Anantharaman based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Thomas Anantharaman. Thomas Anantharaman is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

20 of 20 papers shown
1.
Pang, Andy Wing Chun, et al.. (2019). Comprehensive Detection of Germline and Somatic Structural Mutation in Cancer Genomes by Bionano Genomics Optical Mapping. Journal of Biomolecular Techniques JBT. 30. 3 indexed citations
2.
Anantharaman, Thomas. (2018). A delay insensitive regular expression recognizer. Figshare. 3 indexed citations
3.
Shelton, Jennifer, Michelle C. Coleman, Nic Herndon, et al.. (2015). Tools and pipelines for BioNano data: molecule assembly pipeline and FASTA super scaffolding tool. BMC Genomics. 16(1). 734–734. 67 indexed citations
4.
Cao, Hongzhi, Alex Hastie, Dandan Cao, et al.. (2014). Rapid detection of structural variation in a human genome using nanochannel-based genome mapping technology. GigaScience. 3(1). 34–34. 104 indexed citations
5.
Wu, Hao, Kevin J. Kim, Kshama Mehta, et al.. (2008). Copy Number Variant Analysis of Human Embryonic Stem Cells. Stem Cells. 26(6). 1484–1489. 40 indexed citations
6.
Zhou, Shiguo, Andrew C. Kile, Erika Kvikstad, et al.. (2004). Shotgun optical mapping of the entire Leishmania major Friedlin genome. Molecular and Biochemical Parasitology. 138(1). 97–106. 34 indexed citations
7.
Anantharaman, Thomas, et al.. (2004). FAST AND CHEAP GENOME WIDE HAPLOTYPE CONSTRUCTION VIA OPTICAL MAPPING. PubMed. 385–396. 8 indexed citations
8.
Lim, Alex, Eileen T. Dimalanta, Konstantinos Potamousis, et al.. (2001). Shotgun Optical Maps of the Whole Escherichia coli O157:H7 Genome. Genome Research. 11(9). 1584–1593. 64 indexed citations
9.
Mishra, Bud & Thomas Anantharaman. (2001). A probabilistic analysis of false positives in optical map alignment and validation. 27–40. 7 indexed citations
10.
Giacalone, Joseph C., Veronica Gibaja, Lei Ni, et al.. (2000). Optical Mapping of BAC Clones from the Human Y Chromosome DAZ Locus. Genome Research. 10(9). 1421–1429. 14 indexed citations
11.
Jing, Junping, Zhongwu Lai, Christopher E. Aston, et al.. (1999). Optical Mapping of Plasmodium falciparum Chromosome 2. Genome Research. 9(2). 175–181. 24 indexed citations
12.
Aston, Christopher E., et al.. (1999). Optical PCR: Genomic analysis by long-range PCR and optical mapping. Mammalian Genome. 10(10). 1005–1009. 11 indexed citations
13.
Lai, Zhongwu, Junping Jing, Christopher E. Aston, et al.. (1999). A shotgun optical map of the entire Plasmodium falciparum genome. Nature Genetics. 23(3). 309–313. 63 indexed citations
14.
Anantharaman, Thomas & Bud Mishra. (1998). Genomics via Optical Mapping (I): Probabilistic Analysis of Optical Mapping Models. 3 indexed citations
15.
Anantharaman, Thomas, et al.. (1998). Genomics via Optical Mapping III: Contiging Genomic DNA and Variations. 15 indexed citations
16.
Anantharaman, Thomas, Brajendra Mishra, & David C. Schwartz. (1997). Genomics via Optical Mapping II: Ordered Restriction Maps. Journal of Computational Biology. 4(2). 91–118. 54 indexed citations
17.
Mishra, Bud & Thomas Anantharaman. (1997). Statistical algorithms for optical mapping of the human genome.
18.
Cai, Wei, Xinghua Hu, Junping Jing, et al.. (1995). Mapping the genome one molecule at a time — optical mapping. Nature. 378(6556). 516–517. 28 indexed citations
19.
Anantharaman, Thomas & Roberto Bisiani. (1986). A hardware accelerator for speech recognition algorithms. ACM SIGARCH Computer Architecture News. 14(2). 216–223. 20 indexed citations
20.
Anantharaman, Thomas, E. M. Clarke, Michael J. Foster, & Bud Mishra. (1986). Compiling path expressions into VLSI circuits. Distributed Computing. 1(3). 150–166. 6 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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