Takeshi Obayashi

9.9k total citations · 2 hit papers
42 papers, 7.3k citations indexed

About

Takeshi Obayashi is a scholar working on Molecular Biology, Plant Science and Renewable Energy, Sustainability and the Environment. According to data from OpenAlex, Takeshi Obayashi has authored 42 papers receiving a total of 7.3k indexed citations (citations by other indexed papers that have themselves been cited), including 36 papers in Molecular Biology, 13 papers in Plant Science and 5 papers in Renewable Energy, Sustainability and the Environment. Recurrent topics in Takeshi Obayashi's work include Bioinformatics and Genomic Networks (18 papers), Gene expression and cancer classification (13 papers) and Photosynthetic Processes and Mechanisms (9 papers). Takeshi Obayashi is often cited by papers focused on Bioinformatics and Genomic Networks (18 papers), Gene expression and cancer classification (13 papers) and Photosynthetic Processes and Mechanisms (9 papers). Takeshi Obayashi collaborates with scholars based in Japan, United States and South Korea. Takeshi Obayashi's co-authors include Kenta Nakai, Paul Horton, Hideaki Harada, Kengo Kinoshita, Hiroyuki Ohta, Yuichi Aoki, Daisuke Shibata, Shu Tadaka, Tatsuru Masuda and Yuko Sasaki‐Sekimoto and has published in prestigious journals such as Proceedings of the National Academy of Sciences, Nucleic Acids Research and Bioinformatics.

In The Last Decade

Takeshi Obayashi

42 papers receiving 7.2k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

WoLF PSORT: protein localization predictor

2007 3.1k citations Paul Horton, Takeshi Obayashi et al. Nucleic Acids Research profile →
Omics-based identification of Arabidopsis Myb transcription factors regulating aliphatic glucosinolate biosynthesis

2007 538 citations Masami Yokota Hirai, Kenjiro Sugiyama et al. Proceedings of the National Academy of Sciences profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Takeshi Obayashi Japan	27	5.1k	4.0k	479	383	317	42	7.3k
Sang Yeol Lee South Korea	61	6.3k 1.2×	7.9k 2.0×	345 0.7×	262 0.7×	504 1.6×	213	10.5k
Thomas Girke United States	42	4.6k 0.9×	4.6k 1.1×	407 0.8×	342 0.9×	256 0.8×	80	7.6k
Marc Boutry Belgium	54	6.3k 1.2×	4.9k 1.2×	200 0.4×	206 0.5×	313 1.0×	157	9.0k
Stéphane Rombauts Belgium	42	4.4k 0.9×	4.4k 1.1×	581 1.2×	463 1.2×	267 0.8×	84	6.8k
Axel Nagel Germany	11	3.0k 0.6×	4.0k 1.0×	216 0.5×	359 0.9×	218 0.7×	12	5.6k
Lisanna Paladin Italy	11	5.3k 1.0×	2.4k 0.6×	313 0.7×	815 2.1×	286 0.9×	17	7.6k
Keith Lindsey United Kingdom	57	5.4k 1.1×	6.6k 1.6×	337 0.7×	291 0.8×	212 0.7×	165	8.6k
Olof Emanuelsson Sweden	23	8.3k 1.6×	3.5k 0.9×	320 0.7×	540 1.4×	564 1.8×	33	10.8k
Jean T. Greenberg United States	45	3.7k 0.7×	6.9k 1.7×	325 0.7×	496 1.3×	594 1.9×	76	8.9k
Jingchu Luo China	31	6.8k 1.3×	7.5k 1.9×	242 0.5×	913 2.4×	205 0.6×	74	10.4k

Countries citing papers authored by Takeshi Obayashi

Since Specialization

Citations

This map shows the geographic impact of Takeshi Obayashi's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Takeshi Obayashi with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Takeshi Obayashi more than expected).

Fields of papers citing papers by Takeshi Obayashi

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Takeshi Obayashi. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Takeshi Obayashi. The network helps show where Takeshi Obayashi may publish in the future.

Co-authorship network of co-authors of Takeshi Obayashi

This figure shows the co-authorship network connecting the top 25 collaborators of Takeshi Obayashi. A scholar is included among the top collaborators of Takeshi Obayashi based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Takeshi Obayashi. Takeshi Obayashi is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

Obayashi, Takeshi, et al.. (2022). COXPRESdb v8: an animal gene coexpression database navigating from a global view to detailed investigations. Nucleic Acids Research. 51(D1). D80–D87. 17 indexed citations

Obayashi, Takeshi, et al.. (2022). ATTED-II v11: A Plant Gene Coexpression Database Using a Sample Balancing Technique by Subagging of Principal Components. Plant and Cell Physiology. 63(6). 869–881. 64 indexed citations

Yamaguchi, Yasuka L., Javier Cabrera, Satoru Nakagami, et al.. (2017). Root-Knot and Cyst Nematodes Activate Procambium-Associated Genes in Arabidopsis Roots. Frontiers in Plant Science. 8. 1195–1195. 48 indexed citations

Narise, Takafumi, Nozomu Sakurai, Takeshi Obayashi, Hiroyuki Ohta, & Daisuke Shibata. (2017). Co-expressed Pathways DataBase for Tomato: a database to predict pathways relevant to a query gene. BMC Genomics. 18(1). 437–437. 7 indexed citations

Obayashi, Takeshi, et al.. (2017). Arabinogalactan Proteins Accumulate in the Cell Walls of Searching Hyphae of the Stem Parasitic Plants, Cuscuta campestris and Cuscuta japonica. Plant and Cell Physiology. 58(11). 1868–1877. 18 indexed citations

Takagi, M., Takuya Sakamoto, Keiichirou Nemoto, et al.. (2016). Plant Aurora kinases interact with and phosphorylate transcription factors. Journal of Plant Research. 129(6). 1165–1178. 10 indexed citations

Okamura, Yasunobu, Takeshi Obayashi, & Kengo Kinoshita. (2015). Comparison of Gene Coexpression Profiles and Construction of Conserved Gene Networks to Find Functional Modules. PLoS ONE. 10(7). e0132039–e0132039. 6 indexed citations

Okamura, Yasunobu, Yuichi Aoki, Takeshi Obayashi, et al.. (2014). COXPRESdb in 2015: coexpression database for animal species by DNA-microarray and RNAseq-based expression data with multiple quality assessment systems. Nucleic Acids Research. 43(D1). D82–D86. 124 indexed citations

Kikkawa, Takako, et al.. (2013). Dmrta1 regulates proneural gene expression downstream of Pax6 in the mammalian telencephalon. Genes to Cells. 18(8). 636–649. 43 indexed citations

10.

Obayashi, Takeshi, Yasunobu Okamura, Satoshi Ito, et al.. (2013). ATTED-II in 2014: Evaluation of Gene Coexpression in Agriculturally Important Plants. Plant and Cell Physiology. 55(1). e6–e6. 79 indexed citations

11.

Obayashi, Takeshi, Yasunobu Okamura, Satoshi Ito, et al.. (2012). COXPRESdb: a database of comparative gene coexpression networks of eleven species for mammals. Nucleic Acids Research. 41(D1). D1014–D1020. 66 indexed citations

12.

Kobayashi, Koichi, Takeshi Obayashi, & Tatsuru Masuda. (2012). Role of the G-box element in regulation of chlorophyll biosynthesis in Arabidopsis roots. Plant Signaling & Behavior. 7(8). 922–926. 39 indexed citations

13.

Suzuki, Naoki, Emiko Aizawa, Takeshi Obayashi, et al.. (2012). Corticotropin-Releasing Hormone Receptor 1 Gene Variants in Irritable Bowel Syndrome. PLoS ONE. 7(9). e42450–e42450. 22 indexed citations

14.

Shimada, Hiroshi, Takeshi Obayashi, Naoki Takahashi, Minami Matsui, & Atsushi Sakamoto. (2010). Normalization using ploidy and genomic DNA copy number allows absolute quantification of transcripts, proteins and metabolites in cells. Plant Methods. 6(1). 29–29. 10 indexed citations

15.

Obayashi, Takeshi, et al.. (2007). COXPRESdb: a database of coexpressed gene networks in mammals. Nucleic Acids Research. 36(Database). D77–D82. 107 indexed citations

16.

Hirai, Masami Yokota, Kenjiro Sugiyama, Yuji Sawada, et al.. (2007). Omics-based identification of Arabidopsis Myb transcription factors regulating aliphatic glucosinolate biosynthesis. Proceedings of the National Academy of Sciences. 104(15). 6478–6483. 538 indexed citations breakdown →

17.

Noji, Masaaki, Cintia Goulart Kawashima, Takeshi Obayashi, & Kazuki Saito. (2006). In silico assessment of gene function involved in cysteine biosynthesis in Arabidopsis: expression analysis of multiple isoforms of serine acetyltransferase. Amino Acids. 30(2). 163–171. 6 indexed citations

18.

Horton, Paul, Keun-Joon Park, Takeshi Obayashi, & Kenta Nakai. (2005). PROTEIN SUBCELLULAR LOCALIZATION PREDICTION WITH WOLF PSORT. 39–48. 211 indexed citations

19.

Obayashi, Takeshi. (2004). Distinctive Features of Plant Organs Characterized by Global Analysis of Gene Expression in Arabidopsis. DNA Research. 11(1). 11–25. 25 indexed citations

20.

Makino, Sou‐ichi, Hiroshi Asakura, Takeshi Obayashi, et al.. (1999). Molecular epidemiological study on tetracycline resistance R plasmids in enterohaemorrhagic Escherichia coli O157[ratio ]H7. Epidemiology and Infection. 123(1). 25–30. 9 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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