Stefanie Widder

4.5k total citations · 2 hit papers
27 papers, 2.5k citations indexed

About

Stefanie Widder is a scholar working on Molecular Biology, Genetics and Ecology. According to data from OpenAlex, Stefanie Widder has authored 27 papers receiving a total of 2.5k indexed citations (citations by other indexed papers that have themselves been cited), including 22 papers in Molecular Biology, 7 papers in Genetics and 5 papers in Ecology. Recurrent topics in Stefanie Widder's work include Gene Regulatory Network Analysis (10 papers), Bioinformatics and Genomic Networks (7 papers) and Gut microbiota and health (7 papers). Stefanie Widder is often cited by papers focused on Gene Regulatory Network Analysis (10 papers), Bioinformatics and Genomic Networks (7 papers) and Gut microbiota and health (7 papers). Stefanie Widder collaborates with scholars based in Austria, United States and Germany. Stefanie Widder's co-authors include David Berry, Mihaela Pavličev, Jacob M. Musser, Aviv Bergman, Gerhard Schlosser, Clare V. H. Baker, Connie Cepko, Günter P. Wagner, Detlev Arendt and Manfred D. Laubichler and has published in prestigious journals such as Proceedings of the National Academy of Sciences, Nature Communications and Bioinformatics.

In The Last Decade

Stefanie Widder

26 papers receiving 2.5k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Deciphering microbial interactions and detecting keystone species with co-occurrence networks

2014 1.3k citations David Berry, Stefanie Widder Frontiers in Microbiology profile →
The origin and evolution of cell types

2016 473 citations Detlev Arendt, Jacob M. Musser et al. Nature Reviews Genetics profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Stefanie Widder Austria	16	1.4k	948	411	212	200	27	2.5k
Shawn W. Polson United States	27	1.3k 0.9×	1.7k 1.8×	446 1.1×	141 0.7×	126 0.6×	79	3.2k
Jean‐Claude Walser Switzerland	34	1.7k 1.2×	1.8k 1.9×	1.2k 2.8×	242 1.1×	222 1.1×	81	4.1k
Hideki Noguchi Japan	21	2.6k 1.9×	708 0.7×	553 1.3×	73 0.3×	193 1.0×	53	3.7k
Rachel J. Whitaker United States	32	2.6k 1.8×	2.3k 2.4×	471 1.1×	112 0.5×	143 0.7×	85	4.2k
Masayuki Ushio Japan	27	954 0.7×	1.4k 1.5×	961 2.3×	595 2.8×	57 0.3×	88	3.0k
Andrew R. Smith United Kingdom	28	1.3k 0.9×	719 0.8×	513 1.2×	646 3.0×	58 0.3×	119	3.3k
Laurent Noé France	12	1.4k 1.0×	684 0.7×	519 1.3×	23 0.1×	178 0.9×	25	2.5k
Julie Poulain France	40	2.2k 1.5×	1.7k 1.8×	1.2k 2.9×	133 0.6×	157 0.8×	81	4.8k
Hajk‐Georg Drost Germany	18	1.6k 1.2×	582 0.6×	1.1k 2.7×	34 0.2×	150 0.8×	31	3.0k
Yong Li China	40	1.8k 1.3×	784 0.8×	2.3k 5.6×	139 0.7×	71 0.4×	144	5.3k

Countries citing papers authored by Stefanie Widder

Since Specialization

Citations

This map shows the geographic impact of Stefanie Widder's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Stefanie Widder with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Stefanie Widder more than expected).

Fields of papers citing papers by Stefanie Widder

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Stefanie Widder. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Stefanie Widder. The network helps show where Stefanie Widder may publish in the future.

Co-authorship network of co-authors of Stefanie Widder

This figure shows the co-authorship network connecting the top 25 collaborators of Stefanie Widder. A scholar is included among the top collaborators of Stefanie Widder based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Stefanie Widder. Stefanie Widder is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

Sort: Min cites: Since: Top N: Style:

20 of 20 papers shown

Palomo-Irigoyen, Marta, Latifa Bakiri, Tim Hendrikx, et al.. (2025). Chronic skin and systemic inflammation modulated by S100A8 and S100A9 complexes 4737. The Journal of Immunology. 214(Supplement_1).

Palomo-Irigoyen, Marta, Latifa Bakiri, Tim Hendrikx, et al.. (2025). Chronic skin and systemic inflammation modulated by S100A8 and S100A9 complexes. Cell Death and Differentiation. 32(10). 1833–1844. 1 indexed citations

Widder, Stefanie, Lisa A. Carmody, Kristopher Opron, et al.. (2024). Microbial community organization designates distinct pulmonary exacerbation types and predicts treatment outcome in cystic fibrosis. Nature Communications. 15(1). 4889–4889. 6 indexed citations

Martin, Christian, et al.. (2023). Longitudinal microbial and molecular dynamics in the cystic fibrosis lung after Elexacaftor–Tezacaftor–Ivacaftor therapy. Respiratory Research. 24(1). 317–317. 11 indexed citations

Delogu, Francesco, Benoît J. Kunath, Rashi Halder, et al.. (2023). Forecasting the dynamics of a complex microbial community using integrated meta-omics. Nature Ecology & Evolution. 8(1). 32–44. 8 indexed citations

Widder, Stefanie, Irene Görzer, Stefan Schwarz, et al.. (2022). Metagenomic sequencing reveals time, host, and body compartment-specific viral dynamics after lung transplantation. Microbiome. 10(1). 66–66. 7 indexed citations

Faust, Karoline, Béatrice Laroche, Sophie de Buyl, et al.. (2018). Signatures of ecological processes in microbial community time series. Microbiome. 6(1). 120–120. 65 indexed citations

Muller, Emilie, et al.. (2017). Using metabolic networks to resolve ecological properties of microbiomes. Current Opinion in Systems Biology. 8. 73–80. 57 indexed citations

Quinn, Robert A., Katrine Whiteson, Yan Wei Lim, et al.. (2016). Ecological networking of cystic fibrosis lung infections. npj Biofilms and Microbiomes. 2(1). 4–4. 62 indexed citations

10.

Arendt, Detlev, Jacob M. Musser, Clare V. H. Baker, et al.. (2016). The origin and evolution of cell types. Nature Reviews Genetics. 17(12). 744–757. 473 indexed citations breakdown →

11.

Maixner, Frank, et al.. (2014). Metagenomic Analysis Reveals Presence of Treponema denticola in a Tissue Biopsy of the Iceman. PLoS ONE. 9(6). e99994–e99994. 19 indexed citations

12.

Behrens, Sebastian, Stefanie Widder, Gopala Krishna Mannala, et al.. (2014). Ultra Deep Sequencing of Listeria monocytogenes sRNA Transcriptome Revealed New Antisense RNAs. PLoS ONE. 9(2). e83979–e83979. 28 indexed citations

13.

Berry, David & Stefanie Widder. (2014). Deciphering microbial interactions and detecting keystone species with co-occurrence networks. Frontiers in Microbiology. 5. 219–219. 1269 indexed citations breakdown →

14.

Widder, Stefanie, Ricard V. Solé, & Javier Macía. (2012). Evolvability of feed-forward loop architecture biases its abundance in transcription networks. BMC Systems Biology. 6(1). 7–7. 15 indexed citations

15.

Widder, Stefanie, Javier Macía, & Ricard V. Solé. (2009). Monomeric Bistability and the Role of Autoloops in Gene Regulation. PLoS ONE. 4(4). e5399–e5399. 10 indexed citations

16.

Macía, Javier, Stefanie Widder, & Ricard V. Solé. (2009). Specialized or flexible feed-forward loop motifs: a question of topology. BMC Systems Biology. 3(1). 84–84. 31 indexed citations

17.

Macía, Javier, Stefanie Widder, & Ricard V. Solé. (2009). Why are cellular switches Boolean? General conditions for multistable genetic circuits. Journal of Theoretical Biology. 261(1). 126–135. 32 indexed citations

18.

Widder, Stefanie, Josef Schicho, & Peter Schuster. (2007). Dynamic patterns of gene regulation I: Simple two-gene systems. Journal of Theoretical Biology. 246(3). 395–419. 38 indexed citations

19.

Flamm, Christoph, Lukas Endler, Stefan C. Müller, Stefanie Widder, & Peter Schuster. (2007). A minimal and self-consistentin silicocell model based on macromolecular interactions. Philosophical Transactions of the Royal Society B Biological Sciences. 362(1486). 1831–1839. 7 indexed citations

20.

Müller, Stefan C., Josef Hofbauer, Lukas Endler, et al.. (2006). A generalized model of the repressilator. Journal of Mathematical Biology. 53(6). 905–937. 68 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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