Ramana Madupu

37.0k total citations · 1 hit paper
29 papers, 2.3k citations indexed

About

Ramana Madupu is a scholar working on Molecular Biology, Ecology and Clinical Biochemistry. According to data from OpenAlex, Ramana Madupu has authored 29 papers receiving a total of 2.3k indexed citations (citations by other indexed papers that have themselves been cited), including 21 papers in Molecular Biology, 14 papers in Ecology and 3 papers in Clinical Biochemistry. Recurrent topics in Ramana Madupu's work include Genomics and Phylogenetic Studies (17 papers), Microbial Community Ecology and Physiology (8 papers) and Bacteriophages and microbial interactions (6 papers). Ramana Madupu is often cited by papers focused on Genomics and Phylogenetic Studies (17 papers), Microbial Community Ecology and Physiology (8 papers) and Bacteriophages and microbial interactions (6 papers). Ramana Madupu collaborates with scholars based in United States, United Kingdom and Germany. Ramana Madupu's co-authors include Owen White, Qinghu Ren, William Nelson, Tatiana Tatusova, George M Garrity, Dawn Field, Nikos C. Kyrpides, William Klimke, Guy Cochrane and Samuel V. Angiuoli and has published in prestigious journals such as Proceedings of the National Academy of Sciences, Nucleic Acids Research and PLoS ONE.

In The Last Decade

Ramana Madupu

29 papers receiving 2.2k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Toward an Online Repository of Standard Operating Procedures (SOPs) for (Meta)genomic Annotation

2008 536 citations Samuel V. Angiuoli, William Klimke et al. OMICS A Journal of Integrative Biology profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Ramana Madupu United States	18	1.4k	791	342	239	226	29	2.3k
Sabine Gronow Germany	22	1.0k 0.7×	488 0.6×	216 0.6×	203 0.8×	222 1.0×	45	1.7k
Yaara Oppenheimer‐Shaanan Israel	15	1.2k 0.9×	615 0.8×	302 0.9×	435 1.8×	208 0.9×	18	1.8k
David Bruce United States	30	1.3k 0.9×	656 0.8×	323 0.9×	274 1.1×	455 2.0×	88	2.8k
Nancy Yu Sweden	16	2.2k 1.6×	571 0.7×	228 0.7×	535 2.2×	262 1.2×	27	3.5k
Aurélie Lajus France	21	1.1k 0.8×	539 0.7×	163 0.5×	194 0.8×	202 0.9×	26	2.2k
Alexandra Calteau France	26	1.1k 0.8×	685 0.9×	221 0.6×	198 0.8×	279 1.2×	37	2.5k
Rodolpho Mattos Albano Brazil	32	1.2k 0.9×	378 0.5×	167 0.5×	325 1.4×	271 1.2×	136	2.8k
Antony T. Vincent Canada	25	840 0.6×	552 0.7×	591 1.7×	129 0.5×	313 1.4×	97	2.2k
J C Lara United States	20	1.1k 0.8×	649 0.8×	180 0.5×	370 1.5×	368 1.6×	27	2.3k
Béatrice Segurens France	20	1.2k 0.9×	390 0.5×	152 0.4×	465 1.9×	238 1.1×	26	2.1k

Countries citing papers authored by Ramana Madupu

Since Specialization

Citations

This map shows the geographic impact of Ramana Madupu's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Ramana Madupu with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Ramana Madupu more than expected).

Fields of papers citing papers by Ramana Madupu

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Ramana Madupu. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Ramana Madupu. The network helps show where Ramana Madupu may publish in the future.

Co-authorship network of co-authors of Ramana Madupu

This figure shows the co-authorship network connecting the top 25 collaborators of Ramana Madupu. A scholar is included among the top collaborators of Ramana Madupu based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Ramana Madupu. Ramana Madupu is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

Dehghan, Shoaleh, Jason Seto, Ashrafali Mohamed Ismail, et al.. (2019). A Zoonotic Adenoviral Human Pathogen Emerged through Genomic Recombination among Human and Nonhuman Simian Hosts. Journal of Virology. 93(18). 24 indexed citations

Choi, Yongwook, Anirban Banerjee, Sean McNish, et al.. (2018). Co-occurrence of Anaerobes in Human Chronic Wounds. Microbial Ecology. 77(3). 808–820. 42 indexed citations

Singh, Harinder, Yanbao Yu, Moo‐Jin Suh, et al.. (2017). Type 1 Diabetes: Urinary Proteomics and Protein Network Analysis Support Perturbation of Lysosomal Function. Theranostics. 7(10). 2704–2717. 26 indexed citations

Suh, Moo‐Jin, Andrey Tovchigrechko, Vishal Thovarai, et al.. (2015). Quantitative Differences in the Urinary Proteome of Siblings Discordant for Type 1 Diabetes Include Lysosomal Enzymes. Journal of Proteome Research. 14(8). 3123–3135. 25 indexed citations

Bhatnagar, Srijak, Jonathan H. Badger, Ramana Madupu, et al.. (2015). Genome Sequence of the Sulfate-Reducing Thermophilic Bacterium Thermodesulfovibrio yellowstonii Strain DSM 11347 ^T (Phylum Nitrospirae ). Genome Announcements. 3(1). 16 indexed citations

Rosenwald, Anne, et al.. (2014). Evidence for horizontal gene transfer betweenChlamydophila pneumoniaeand Chlamydia phage. PubMed. 4(4). e965076–e965076. 14 indexed citations

Webb‐Robertson, Bobbie‐Jo, Young‐Mo Kim, Erika Zink, et al.. (2014). A statistical analysis of the effects of urease pre-treatment on the measurement of the urinary metabolome by gas chromatography–mass spectrometry. Metabolomics. 10(5). 897–908. 23 indexed citations

Coil, David A., Jonathan H. Badger, Ramana Madupu, et al.. (2014). Complete Genome Sequence of the Extreme Thermophile Dictyoglomus thermophilum H-6-12. Genome Announcements. 2(1). 14 indexed citations

Ma, Yingfei, Ramana Madupu, Ulaş Karaöz, et al.. (2014). Human Papillomavirus Community in Healthy Persons, Defined by Metagenomics Analysis of Human Microbiome Project Shotgun Sequencing Data Sets. Journal of Virology. 88(9). 4786–4797. 96 indexed citations

10.

Wise, Kim S., Michael J. Calcutt, Mark F. Foecking, et al.. (2012). Complete Genome Sequences of Mycoplasma leachii Strain PG50 ^T and the Pathogenic Mycoplasma mycoides subsp. mycoides Small Colony Biotype Strain Gladysdale. Journal of Bacteriology. 194(16). 4448–4449. 19 indexed citations

11.

Madupu, Ramana, Robert J. Dodson, Lauren Brinkac, et al.. (2011). CharProtDB: a database of experimentally characterized protein annotations. Nucleic Acids Research. 40(D1). D237–D241. 18 indexed citations

12.

Madupu, Ramana, Lauren Brinkac, Jennifer Harrow, et al.. (2010). Meeting report: a workshop on Best Practices in Genome Annotation. Database. 2010(0). baq001–baq001. 16 indexed citations

13.

Wise, Kim S., Michael J. Calcutt, Mark F. Foecking, et al.. (2010). Complete Genome Sequence of Mycoplasma bovis Type Strain PG45 (ATCC 25523). Infection and Immunity. 79(2). 982–983. 83 indexed citations

14.

Tanenbaum, David M., Johannes B. Goll, Sean D. Murphy, et al.. (2010). The JCVI standard operating procedure for annotating prokaryotic metagenomic shotgun sequencing data. Standards in Genomic Sciences. 2(2). 229–237. 47 indexed citations

15.

Hartman, Amber, Cédric Norais, Jonathan H. Badger, et al.. (2010). The Complete Genome Sequence of Haloferax volcanii DS2, a Model Archaeon. PLoS ONE. 5(3). e9605–e9605. 213 indexed citations

16.

Wu, Dongying, Jason Raymond, Martin Wu, et al.. (2009). Complete Genome Sequence of the Aerobic CO-Oxidizing Thermophile Thermomicrobium roseum. PLoS ONE. 4(1). e4207–e4207. 87 indexed citations

17.

Davidsen, Tanja M., Erin Beck, Robert A. Montgomery, et al.. (2009). The comprehensive microbial resource. Nucleic Acids Research. 38(suppl_1). D340–D345. 203 indexed citations

18.

Angiuoli, Samuel V., William Klimke, Guy Cochrane, et al.. (2008). Toward an Online Repository of Standard Operating Procedures (SOPs) for (Meta)genomic Annotation. OMICS A Journal of Integrative Biology. 12(2). 137–141. 536 indexed citations breakdown →

19.

Palenik, Brian, Qinghu Ren, Christopher L. Dupont, et al.. (2006). Genome sequence of Synechococcus CC9311: Insights into adaptation to a coastal environment. Proceedings of the National Academy of Sciences. 103(36). 13555–13559. 197 indexed citations

20.

Wu, Martin, Qinghu Ren, A. Scott Durkin, et al.. (2005). Life in Hot Carbon Monoxide: The Complete Genome Sequence of Carboxydothermus hydrogenoformans Z-2901. PLoS Genetics. 1(5). e65–e65. 201 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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