Nikolaos Barkas

4.0k citations

22 papers · 1.3k indexed · 1 hit paper · h-index 12

Co-authors: Peter V. Kharchenko Adam J. Mead Sten Eirik W. Jacobsen Alice Giustacchini Alba Rodríguez-Meira Benjamin Povinelli Supat Thongjuea Yaroslav Lozinsky
Topics: Single-cell and spatial transcriptomics (7 papers)Cancer Genomics and Diagnostics (4 papers)Acute Myeloid Leukemia Research (3 papers)
Cited by: Hematology Cancer Research Genetics
Journals: Science Nucleic Acids Research Nature Medicine
Partner nations: United Kingdom United States Sweden

In The Last Decade

Nikolaos Barkas

20 papers receiving 1.3k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Analysis of 6.4 million SARS-CoV-2 genomes identifies mutations associated with fitness

2022 162 citations Martin Jankowiak, Nikolaos Barkas et al. Science profile →

Peers

Countries citing papers authored by Nikolaos Barkas

Since Specialization

Citations

This map shows the geographic impact of Nikolaos Barkas's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Nikolaos Barkas with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Nikolaos Barkas more than expected).

Fields of papers citing papers by Nikolaos Barkas

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Nikolaos Barkas. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Nikolaos Barkas. The network helps show where Nikolaos Barkas may publish in the future.

Co-authorship network of co-authors of Nikolaos Barkas

This figure shows the co-authorship network connecting the top 25 collaborators of Nikolaos Barkas. A scholar is included among the top collaborators of Nikolaos Barkas based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Nikolaos Barkas. Nikolaos Barkas is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

#	Work	Indexed citations
1	Mesenchymal thymic niche cells enable regeneration of the adult thymus and T cell immunity 2025 ·Nature Biotechnology ·Karin Gustafsson,(unknown),(unknown),Johanna Hofmann,Kameron Kooshesh,Ninib Baryawno,(unknown),Nicolas Sévère,Ting Zhao,Elizabeth W. Scadden,Joel A. Spencer,(unknown),(unknown),Nikolaos Barkas,(unknown),Konstantinos D. Kokkaliaris,Charles P. Lin,Peter V. Kharchenko,David T. Scadden	0
2	Impaired striatal glutathione–ascorbate metabolism induces transient dopamine increase and motor dysfunction 2024 ·Nature Metabolism ·Mohd Yaseen Malik,(unknown),(unknown),(unknown),Nikolaos Barkas,(unknown),Kerstin N. Timm,(unknown),David A. Bergin,Barbara Zonta,(unknown),Stephan von Hörsten,Mark E. Walton,Peter J. Magill,Claus Nerlov,Liliana Minichiello	2
3	High-depth sequencing characterization of viral dynamics across tissues in fatal COVID-19 reveals compartmentalized infection 2023 ·Nature Communications ·Erica Normandin,Melissa A. Rudy,Nikolaos Barkas,S. F. Schaffner,(unknown),Robert F. Padera,Mehrtash Babadi,Shibani S. Mukerji,Daniel J. Park,Bronwyn MacInnis,Katherine J. Siddle,Pardis C. Sabeti,Isaac H. Solomon	12
4	Analysis of 6.4 million SARS-CoV-2 genomes identifies mutations associated with fitnessbreakdown → 2022 ·Science ·(unknown),Martin Jankowiak,Nikolaos Barkas,S. F. Schaffner,Jesse D. Pyle,Leonid Yurkovetskiy,Matteo Bosso,Daniel J. Park,Mehrtash Babadi,Bronwyn MacInnis,Jeremy Luban,Pardis C. Sabeti,Jacob E. Lemieux	162
5	External signals regulate continuous transcriptional states in hematopoietic stem cells 2021 ·eLife ·Eva M. Fast,(unknown),(unknown),Edroaldo Lummertz da Rocha,Song Yang,Yi Zhou,Jimin Guo,Ninib Baryawno,Nikolaos Barkas,David T. Scadden,Fernando D. Camargo,Leonard I. Zon	15
6	Single cell transcriptomics of primate sensory neurons identifies cell types associated with chronic pain 2021 ·Nature Communications ·Jussi Kupari,Dmitry Usoskin,Marc Parisien,(unknown),Yizhou Hu,Michael P. Fatt,Peter Lönnerberg,Mats Spångberg,B. Eriksson,Nikolaos Barkas,Peter V. Kharchenko,Karin Loré,Samar Khoury,Luda Diatchenko,Patrik Ernfors	110
7	Imprinted Gene Expression and Function of the Dopa Decarboxylase Gene in the Developing Heart 2021 ·Frontiers in Cell and Developmental Biology ·(unknown),(unknown),Nikolaos Barkas,(unknown),Maurício Machaim Franco,Michael Cowley,William Puszyk,(unknown),Melita Irving,(unknown),Andrew Ward,Reiner Schulz,H. Scott Baldwin,Rebecca J. Oakey	10
8	Transcription of intragenic CpG islands influences spatiotemporal host gene pre-mRNA processing 2020 ·Nucleic Acids Research ·(unknown),(unknown),Michael Cowley,Nikolaos Barkas,(unknown),Heba Saadeh,(unknown),(unknown),(unknown),Reiner Schulz,Rebecca J. Oakey	10
9	Unravelling Intratumoral Heterogeneity through High-Sensitivity Single-Cell Mutational Analysis and Parallel RNA Sequencing 2019 ·Molecular Cell ·Alba Rodríguez-Meira,Gemma Buck,Sally‐Ann Clark,Benjamin Povinelli,Verónica Alcolea,Eleni Louka,Simon J. McGowan,Angela Hamblin,Nikolaos Sousos,Nikolaos Barkas,Alice Giustacchini,Bethan Psaila,Sten Eirik W. Jacobsen,Supat Thongjuea,Adam J. Mead	204
10	Joint analysis of heterogeneous single-cell RNA-seq dataset collections 2019 ·Nature Methods ·Nikolaos Barkas,Viktor Petukhov,Daria Nikolaeva,Yaroslav Lozinsky,Samuel Demharter,Konstantin Khodosevich,Peter V. Kharchenko	166
11	Myocardial differentiation is dependent upon endocardial signaling during early cardiogenesis in vitro 2019 ·Development ·(unknown),Nikolaos Barkas,(unknown),Kevin L. Tompkins,Rebecca J. Oakey,H. Scott Baldwin	22
12	Linking transcriptional and genetic tumor heterogeneity through allele analysis of single-cell RNA-seq data 2018 ·Genome Research ·Jean Fan,Hae‐Ock Lee,Soohyun Lee,Daeun Ryu,Semin Lee,(unknown),Seok Jin Kim,Kihyun Kım,Nikolaos Barkas,Peter J. Park,Woong‐Yang Park,Peter V. Kharchenko	126
13	Ezh2 and Runx1 Mutations Collaborate to Initiate Lympho-Myeloid Leukemia in Early Thymic Progenitors 2018 ·Cancer Cell ·Christopher A.G. Booth,Nikolaos Barkas,Wen Hao Neo,Hanane Boukarabila,Elizabeth J. Soilleux,George Giotopoulos,Noushin Farnoud,Alice Giustacchini,Neil Ashley,Joana Carrelha,Lauren E. Jamieson,Deborah Atkinson,Tiphaine Bouriez‐Jones,Rab K. Prinjha,Thomas A. Milne,David T. Teachey,Elli Papaemmanuil,Brian J.P. Huntly,Sten Eirik W. Jacobsen,Adam J. Mead	39
14	Integrated Single Cell Analysis Reveals Cell Cycle and Ontogeny Related Transcriptional Heterogeneity in Hscs 2018 ·Experimental Hematology ·Benjamin Povinelli,Quin F. Wills,Nikolaos Barkas,Christopher A.G. Booth,Kieran R. Campbell,Alba Rodríguez-Meira,Sten Eirik W. Jacobsen,Christopher Yau,Adam J. Mead	1
15	Unravelling Cell Cycle and Ontogeny Transcriptional Heterogeneity in Hematopoietic Stem Cells through Integrated Single Cell RNA-Seq 2017 ·Blood ·Benjamin Povinelli,Quin F. Wills,Nikolaos Barkas,Christopher A.G. Booth,Kieran R. Campbell,Sten Eirik W. Jacobsen,Christopher Yau,Adam J. Mead	1
16	Single-cell transcriptomics uncovers distinct molecular signatures of stem cells in chronic myeloid leukemia 2017 ·Nature Medicine ·Alice Giustacchini,Supat Thongjuea,Nikolaos Barkas,Petter Woll,Benjamin Povinelli,Christopher A.G. Booth,Paul Sopp,Ruggiero Norfo,Alba Rodríguez-Meira,Neil Ashley,Lauren E. Jamieson,Paresh Vyas,Kristina Anderson,Åsa Segerstolpe,Hong Qian,Ulla Olsson‐Strömberg,Satu Mustjoki,Rickard Sandberg,Sten Eirik W. Jacobsen,Adam J. Mead	287
17	Acoustic characterization of the ancient theatre of Tyndaris: Evaluation and proposals for its reuse 2016 ·PORTO Publications Open Repository TOrino (Politecnico di Torino) ·(unknown),(unknown),(unknown),Louena Shtrepi,Giuseppina Emma Puglisi,(unknown),Francesco Mangano,Nikolaos Barkas,Arianna Astolfi	8
18	Single-cell profiling of human megakaryocyte-erythroid progenitors identifies distinct megakaryocyte and erythroid differentiation pathways 2016 ·Genome biology ·Bethan Psaila,Nikolaos Barkas,Deena Iskander,Anindita Roy,Stacie Anderson,Neil Ashley,Valentina S. Caputo,Jens Lichtenberg,Sandra Loaiza,David M. Bodine,Anastasios Karadimitris,Adam J. Mead,Irene Roberts	98
19	Sleep and Sleeplessness in Byzantium 2016 ·Gorgias Press eBooks ·Nikolaos Barkas	0
20	Genome-wide and parental allele-specific analysis of CTCF and cohesin DNA binding in mouse brain reveals a tissue-specific binding pattern and an association with imprinted differentially methylated regions 2013 ·Genome Research ·(unknown),Nikolaos Barkas,Ruth B. McCole,Siobhan Hughes,(unknown),Reiner Schulz,Rebecca J. Oakey	46

About Nikolaos Barkas

Nikolaos Barkas is a scholar working on Hematology, Classics and Behavioral Neuroscience, having authored 22 papers that have together received 1.3k indexed citations. Recurring topics across this work include Single-cell and spatial transcriptomics (7 papers), Cancer Genomics and Diagnostics (4 papers) and Acute Myeloid Leukemia Research (3 papers). The work is most often cited by research in Hematology (316 citations), Cancer Research (308 citations) and Genetics (138 citations). Nikolaos Barkas has collaborated with scholars based in United Kingdom, United States and Sweden. Frequent co-authors include Peter V. Kharchenko, Adam J. Mead, Sten Eirik W. Jacobsen, Alice Giustacchini, Alba Rodríguez-Meira, Benjamin Povinelli, Supat Thongjuea, Yaroslav Lozinsky, Neil Ashley and Samuel Demharter. Their work appears in journals such as Science, Nucleic Acids Research and Nature Medicine.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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