Matúš Kalaš

1.9k total citations
16 papers, 358 citations indexed

About

Matúš Kalaš is a scholar working on Molecular Biology, Information Systems and Management and Computer Networks and Communications. According to data from OpenAlex, Matúš Kalaš has authored 16 papers receiving a total of 358 indexed citations (citations by other indexed papers that have themselves been cited), including 11 papers in Molecular Biology, 9 papers in Information Systems and Management and 4 papers in Computer Networks and Communications. Recurrent topics in Matúš Kalaš's work include Scientific Computing and Data Management (9 papers), Genomics and Phylogenetic Studies (6 papers) and Biomedical Text Mining and Ontologies (4 papers). Matúš Kalaš is often cited by papers focused on Scientific Computing and Data Management (9 papers), Genomics and Phylogenetic Studies (6 papers) and Biomedical Text Mining and Ontologies (4 papers). Matúš Kalaš collaborates with scholars based in Norway, France and United Kingdom. Matúš Kalaš's co-authors include László Kaján, Burkhard Rost, Thomas A. Hopf, Debora S. Marks, Jon Ison, Inge Jonassen, Steve Pettifer, James Malone, Hamish McWilliam and Dan Bolser and has published in prestigious journals such as Bioinformatics, BMC Bioinformatics and Briefings in Bioinformatics.

In The Last Decade

Matúš Kalaš

14 papers receiving 354 citations

Peers

Matúš Kalaš

ISM

Olga Krebs Germany

Jerzy Orłowski Poland

Jon Ison United Kingdom

Bernd Rinn Switzerland

Ling‐Hong Hung United States

Nebojša Tijanić United States

José Cruz-Toledo Canada

Finn Bacall United Kingdom

Andy Jenkinson United Kingdom

Andrea Splendiani United Kingdom

Olga Krebs Germany

Matúš Kalaš

308 ×1.2

125 ×1.0

ISM

70 ×0.9

37 ×0.9

8 ×0.2

Citations per year, relative to Matúš Kalaš Matúš Kalaš (= 1×) peers Olga Krebs

Countries citing papers authored by Matúš Kalaš

Since Specialization

Citations

This map shows the geographic impact of Matúš Kalaš's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Matúš Kalaš with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Matúš Kalaš more than expected).

Fields of papers citing papers by Matúš Kalaš

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Matúš Kalaš. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Matúš Kalaš. The network helps show where Matúš Kalaš may publish in the future.

Co-authorship network of co-authors of Matúš Kalaš

This figure shows the co-authorship network connecting the top 25 collaborators of Matúš Kalaš. A scholar is included among the top collaborators of Matúš Kalaš based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Matúš Kalaš. Matúš Kalaš is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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16 of 16 papers shown

Mikoláš, Martin, Marek Svitok, Garrett W. Meigs, et al.. (2025). Rewilding beech-dominated temperate forest ecosystems: effects on carbon stocks and biodiversity indicators. iForest - Biogeosciences and Forestry. 18(1). 1–9.

Kalaš, Matúš, et al.. (2022). Implementation of Production Planning and Scheduling - A Data Mining Approach. International Journal of Science and Research (IJSR). 11(6). 1120–1126. 1 indexed citations

Serrano‐Solano, Beatriz, Anne Fouilloux, Ignacio Eguinoa, et al.. (2022). Galaxy: A Decade of Realising CWFR Concepts. Data Intelligence. 4(2). 358–371. 3 indexed citations

Ison, Jon, Hans Ienasescu, Piotr Jaroslaw Chmura, et al.. (2021). biotoolsSchema: a formalized schema for bioinformatics software description. GigaScience. 10(1). 6 indexed citations

Ison, Jon, Hervé Ménager, Bryan Brancotte, et al.. (2019). Community curation of bioinformatics software and data resources. Briefings in Bioinformatics. 21(5). 1697–1705. 10 indexed citations

Doppelt‐Azeroual, Olivia, Fabien Mareuil, Matúš Kalaš, et al.. (2017). ReGaTE: Registration of Galaxy Tools in Elixir. GigaScience. 6(6). 1–4. 12 indexed citations

Kalaš, Matúš, et al.. (2017). EDAM – the ontology of bioinformatics operations, types of data, topics, and data formats (2017 update). Faculty of 1000 Research Ltd. 6.

Möller, Steffen, Stuart W. Prescott, Brad Chapman, et al.. (2017). Robust Cross-Platform Workflows: How Technical and Scientific Communities Collaborate to Develop, Test and Share Best Practices for Data Analysis. Data Science and Engineering. 2(3). 232–244. 18 indexed citations

Ménager, Hervé, Matúš Kalaš, Jon Ison, & Marie Grosjean. (2015). The EDAM Ontology. Faculty of 1000 Research Ltd. 4. 1 indexed citations

10.

Ménager, Hervé, Matúš Kalaš, Kristoffer Rapacki, & Jon Ison. (2015). Using registries to integrate bioinformatics tools and services into workbench environments. International Journal on Software Tools for Technology Transfer. 18(6). 581–586. 4 indexed citations

11.

Kaján, László, Thomas A. Hopf, Matúš Kalaš, Debora S. Marks, & Burkhard Rost. (2014). FreeContact: fast and free software for protein contact prediction from residue co-evolution. BMC Bioinformatics. 15(1). 85–85. 117 indexed citations

12.

Möller, Steffen, Enis Afgan, Peter Cock, et al.. (2013). Sprints, Hackathons and Codefests as community gluons in computational biology. EMBnet journal. 19(B). 40–40. 2 indexed citations

13.

Ison, Jon, Matúš Kalaš, Inge Jonassen, et al.. (2013). EDAM: an ontology of bioinformatics operations, types of data and identifiers, topics and formats. Bioinformatics. 29(10). 1325–1332. 153 indexed citations

14.

Soldatova, Larisa, Robert Stevens, Morris A. Swertz, et al.. (2012). Workshop on laboratory protocol standards for the molecular methods database. New Biotechnology. 30(2). 109–113. 5 indexed citations

15.

Gundersen, Sveinung, Matúš Kalaš, Osman Abul, et al.. (2011). Identifying elemental genomic track types and representing them uniformly. BMC Bioinformatics. 12(1). 494–494. 12 indexed citations

16.

Kalaš, Matúš, Pål Puntervoll, Armin Töpfer, et al.. (2010). BioXSD: the common data-exchange format for everyday bioinformatics web services. Bioinformatics. 26(18). i540–i546. 14 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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