Ludwig Geistlinger

5.1k total citations · 2 hit papers
30 papers, 1.6k citations indexed

About

Ludwig Geistlinger is a scholar working on Molecular Biology, Genetics and Cancer Research. According to data from OpenAlex, Ludwig Geistlinger has authored 30 papers receiving a total of 1.6k indexed citations (citations by other indexed papers that have themselves been cited), including 23 papers in Molecular Biology, 11 papers in Genetics and 3 papers in Cancer Research. Recurrent topics in Ludwig Geistlinger's work include Bioinformatics and Genomic Networks (9 papers), Gene expression and cancer classification (7 papers) and Single-cell and spatial transcriptomics (5 papers). Ludwig Geistlinger is often cited by papers focused on Bioinformatics and Genomic Networks (9 papers), Gene expression and cancer classification (7 papers) and Single-cell and spatial transcriptomics (5 papers). Ludwig Geistlinger collaborates with scholars based in United States, Germany and Brazil. Ludwig Geistlinger's co-authors include Levi Waldron, Ralf Zimmer, Christian Gieger, Thomas Illig, Karsten Suhre, Jerzy Adamski, Elisabeth Altmaier, Florian Kronenberg, Martin Hrabě de Angelis and Thomas Meitinger and has published in prestigious journals such as Nucleic Acids Research, Nature Communications and Bioinformatics.

In The Last Decade

Ludwig Geistlinger

28 papers receiving 1.6k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Orchestrating single-cell analysis with Bioconductor

2019 423 citations Ludwig Geistlinger, Kévin Rue-Albrecht et al. profile →
Spatial transcriptomics of healthy and fibrotic human liver at single-cell resolution

2025 29 citations Brianna R. Watson, Raza‐Ur Rahman et al. Nature Communications profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Ludwig Geistlinger United States	19	1.1k	335	244	147	123	30	1.6k
Monika Ray United States	7	1.3k 1.2×	192 0.6×	196 0.8×	93 0.6×	105 0.9×	21	1.8k
Marc Vaudel Norway	29	1.7k 1.6×	228 0.7×	171 0.7×	186 1.3×	105 0.9×	77	2.7k
Martina Kutmon Netherlands	17	1.4k 1.3×	218 0.7×	325 1.3×	190 1.3×	167 1.4×	51	2.1k
Luana Licata Italy	17	1.9k 1.7×	162 0.5×	183 0.8×	106 0.7×	89 0.7×	49	2.3k
Long Gao China	20	788 0.7×	284 0.8×	136 0.6×	269 1.8×	67 0.5×	60	1.5k
Yulin Dai United States	17	600 0.6×	260 0.8×	139 0.6×	113 0.8×	118 1.0×	55	1.0k
Chan Yeong Kim South Korea	13	1.3k 1.2×	145 0.4×	338 1.4×	234 1.6×	80 0.7×	18	1.9k
Thomas Jensen Denmark	15	2.2k 2.0×	330 1.0×	153 0.6×	110 0.7×	127 1.0×	26	2.7k
Nancy Mah Germany	21	1.5k 1.4×	247 0.7×	141 0.6×	184 1.3×	170 1.4×	51	2.0k
Ricard Argelaguet United Kingdom	11	2.0k 1.9×	178 0.5×	353 1.4×	211 1.4×	76 0.6×	17	2.4k

Countries citing papers authored by Ludwig Geistlinger

Since Specialization

Citations

This map shows the geographic impact of Ludwig Geistlinger's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Ludwig Geistlinger with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Ludwig Geistlinger more than expected).

Fields of papers citing papers by Ludwig Geistlinger

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Ludwig Geistlinger. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Ludwig Geistlinger. The network helps show where Ludwig Geistlinger may publish in the future.

Co-authorship network of co-authors of Ludwig Geistlinger

This figure shows the co-authorship network connecting the top 25 collaborators of Ludwig Geistlinger. A scholar is included among the top collaborators of Ludwig Geistlinger based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Ludwig Geistlinger. Ludwig Geistlinger is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

Watson, Brianna R., Raza‐Ur Rahman, Liat Amir-Zilberstein, et al.. (2025). Spatial transcriptomics of healthy and fibrotic human liver at single-cell resolution. Nature Communications. 16(1). 319–319. 29 indexed citations breakdown →

Drnevich, Jenny, Frederick J. Tan, Fabricio Almeida‐Silva, et al.. (2025). Learning and teaching biological data science in the Bioconductor community. PLoS Computational Biology. 21(4). e1012925–e1012925.

Bhosle, Amrisha, Sena Bae, Yancong Zhang, et al.. (2024). Integrated annotation prioritizes metabolites with bioactivity in inflammatory bowel disease. Molecular Systems Biology. 20(4). 338–361. 3 indexed citations

Righelli, Dario, Marcel Ramos, Ricard Argelaguet, et al.. (2023). Curated single cell multimodal landmark datasets for R/Bioconductor. PLoS Computational Biology. 19(8). e1011324–e1011324. 2 indexed citations

Ramos, Marcel, Martin Morgan, Ludwig Geistlinger, Vincent J. Carey, & Levi Waldron. (2023). RaggedExperiment: the missing link between genomic ranges and matrices in Bioconductor. Bioinformatics. 39(6).

Geistlinger, Ludwig, Roger Vargas, Tyrone Lee, et al.. (2023). BioPlexR and BioPlexPy: integrated data products for the analysis of human protein interactions. Bioinformatics. 39(3). 5 indexed citations

Tomić, Adriana, Levi Waldron, Ludwig Geistlinger, et al.. (2021). SIMON: Open-Source Knowledge Discovery Platform. Patterns. 2(1). 100178–100178. 6 indexed citations

Oh, Sehyun, Ludwig Geistlinger, Marcel Ramos, et al.. (2020). Reliable Analysis of Clinical Tumor-Only Whole-Exome Sequencing Data. JCO Clinical Cancer Informatics. 4(4). 321–335. 19 indexed citations

Geistlinger, Ludwig, Gergely Csaba, Marcel Ramos, et al.. (2019). Toward a gold standard for benchmarking gene set enrichment analysis. Briefings in Bioinformatics. 22(1). 545–556. 77 indexed citations

10.

Silva, Vinicius Henrique da, Marcel Ramos, Martien A. M. Groenen, et al.. (2019). CNVRanger: association analysis of CNVs with gene expression and quantitative phenotypes. Bioinformatics. 36(3). 972–973. 22 indexed citations

11.

Beghini, Francesco, Audrey Renson, Christine P. Zolnik, et al.. (2019). Tobacco exposure associated with oral microbiota oxygen utilization in the New York City Health and Nutrition Examination Study. Annals of Epidemiology. 34. 18–25.e3. 26 indexed citations

12.

Diniz, Wellison J. S., Gianluca Mazzoni, Luiz Lehmann Coutinho, et al.. (2019). Detection of Co-expressed Pathway Modules Associated With Mineral Concentration and Meat Quality in Nelore Cattle. Frontiers in Genetics. 10. 210–210. 23 indexed citations

13.

Souza, Marcela Maria de, Adhemar Zerlotini, Ludwig Geistlinger, et al.. (2018). A comprehensive manually-curated compendium of bovine transcription factors. Scientific Reports. 8(1). 22 indexed citations

14.

Chen, Gregory M., Lavanya Kannan, Ludwig Geistlinger, et al.. (2018). Consensus on Molecular Subtypes of High-Grade Serous Ovarian Carcinoma. Clinical Cancer Research. 24(20). 5037–5047. 84 indexed citations

15.

César, Aline Silva Mello, Luciana Correia de Almeida Regitano, James M. Reecy, et al.. (2018). Identification of putative regulatory regions and transcription factors associated with intramuscular fat content traits. BMC Genomics. 19(1). 499–499. 42 indexed citations

16.

Silva, Vinicius Henrique da, Luciana Correia de Almeida Regitano, Ludwig Geistlinger, et al.. (2016). Genome-Wide Detection of CNVs and Their Association with Meat Tenderness in Nelore Cattle. PLoS ONE. 11(6). e0157711–e0157711. 47 indexed citations

17.

Geistlinger, Ludwig, Gergely Csaba, & Ralf Zimmer. (2016). Bioconductor’s EnrichmentBrowser: seamless navigation through combined results of set- & network-based enrichment analysis. BMC Bioinformatics. 17(1). 45–45. 50 indexed citations

18.

Geistlinger, Ludwig, et al.. (2013). A comprehensive gene regulatory network for the diauxic shift in Saccharomyces cerevisiae. Nucleic Acids Research. 41(18). 8452–8463. 15 indexed citations

19.

Geistlinger, Ludwig, Gergely Csaba, Robert Küffner, Nicola Mulder, & Ralf Zimmer. (2011). From sets to graphs: towards a realistic enrichment analysis of transcriptomic systems. Bioinformatics. 27(13). i366–i373. 50 indexed citations

20.

Wang, Zhen, Guolian Ding, Ludwig Geistlinger, et al.. (2010). Evolution of Protein Phosphorylation for Distinct Functional Modules in Vertebrate Genomes. Molecular Biology and Evolution. 28(3). 1131–1140. 19 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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