Kristoffer Sahlin

2.9k total citations
27 papers, 624 citations indexed

About

Kristoffer Sahlin is a scholar working on Molecular Biology, Plant Science and Ecology. According to data from OpenAlex, Kristoffer Sahlin has authored 27 papers receiving a total of 624 indexed citations (citations by other indexed papers that have themselves been cited), including 23 papers in Molecular Biology, 7 papers in Plant Science and 5 papers in Ecology. Recurrent topics in Kristoffer Sahlin's work include Genomics and Phylogenetic Studies (20 papers), RNA and protein synthesis mechanisms (9 papers) and Chromosomal and Genetic Variations (6 papers). Kristoffer Sahlin is often cited by papers focused on Genomics and Phylogenetic Studies (20 papers), RNA and protein synthesis mechanisms (9 papers) and Chromosomal and Genetic Variations (6 papers). Kristoffer Sahlin collaborates with scholars based in Sweden, United States and Finland. Kristoffer Sahlin's co-authors include Paul Medvedev, Lars Arvestad, Stefan Prost, Joakim Lundeberg, Marisa Lim, Björn Nystedt, Francesco Vezzi, Veli Mäkinen, Marta Tomaszkiewicz and Kateryna D. Makova and has published in prestigious journals such as Nature Communications, Bioinformatics and PLoS ONE.

In The Last Decade

Kristoffer Sahlin

26 papers receiving 617 citations

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name h Career Trend Papers Cites
Kristoffer Sahlin Sweden 13 431 130 124 99 65 27 624
Shiaw‐Pyng Yang United States 8 459 1.1× 293 2.3× 191 1.5× 212 2.1× 22 0.3× 9 804
Jingbo Tang China 3 417 1.0× 156 1.2× 117 0.9× 119 1.2× 10 0.2× 3 685
Chaochao Yan China 14 264 0.6× 46 0.4× 76 0.6× 209 2.1× 51 0.8× 47 556
Merly Escalona United States 9 235 0.5× 73 0.6× 85 0.7× 144 1.5× 21 0.3× 64 408
Cristian Del Fabbro Italy 7 365 0.8× 242 1.9× 74 0.6× 83 0.8× 16 0.2× 8 586
Vanesa Vee United States 3 403 0.9× 231 1.8× 97 0.8× 152 1.5× 10 0.2× 3 589
Josephine A. Reinhardt United States 8 357 0.8× 165 1.3× 111 0.9× 172 1.7× 30 0.5× 14 544
Eric Yao United States 5 498 1.2× 321 2.5× 80 0.6× 169 1.7× 11 0.2× 11 757
Caroline Belser France 12 393 0.9× 312 2.4× 137 1.1× 115 1.2× 8 0.1× 26 670
Melanie Kirsche United States 5 375 0.9× 239 1.8× 46 0.4× 221 2.2× 12 0.2× 5 609

Countries citing papers authored by Kristoffer Sahlin

Since Specialization
Citations

This map shows the geographic impact of Kristoffer Sahlin's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Kristoffer Sahlin with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Kristoffer Sahlin more than expected).

Fields of papers citing papers by Kristoffer Sahlin

Since Specialization
Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Kristoffer Sahlin. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Kristoffer Sahlin. The network helps show where Kristoffer Sahlin may publish in the future.

Co-authorship network of co-authors of Kristoffer Sahlin

This figure shows the co-authorship network connecting the top 25 collaborators of Kristoffer Sahlin. A scholar is included among the top collaborators of Kristoffer Sahlin based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Kristoffer Sahlin. Kristoffer Sahlin is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

20 of 20 papers shown
1.
Sahlin, Kristoffer, et al.. (2025). De novo clustering of large long-read transcriptome datasets with isONclust3. Bioinformatics. 41(5). 1 indexed citations
2.
Nguyen, M., et al.. (2025). cONcat: Computational reconstruction of concatenated fragments from long Oxford Nanopore reads. PLoS ONE. 20(7). e0321246–e0321246.
3.
Martin, Marcel, Wei Shen, Lidong Guo, et al.. (2024). Designing efficient randstrobes for sequence similarity analyses. Bioinformatics. 40(4). 1 indexed citations
4.
Tomaszkiewicz, Marta, Kristoffer Sahlin, Paul Medvedev, & Kateryna D. Makova. (2023). Transcript Isoform Diversity of Ampliconic Genes on the Y Chromosome of Great Apes. Genome Biology and Evolution. 15(11). 3 indexed citations
5.
Sahlin, Kristoffer, et al.. (2023). Entropy predicts sensitivity of pseudorandom seeds. Genome Research. 33(7). 1162–1174. 2 indexed citations
6.
Sahlin, Kristoffer, et al.. (2023). Efficient mapping of accurate long reads in minimizer space with mapquik. Genome Research. 33(7). 1188–1197. 8 indexed citations
7.
Sahlin, Kristoffer, et al.. (2023). Nanopore sequencing of PCR products enables multicopy gene family reconstruction. Computational and Structural Biotechnology Journal. 21. 3656–3664. 4 indexed citations
8.
Sahlin, Kristoffer, et al.. (2023). isONform: reference-free transcriptome reconstruction from Oxford Nanopore data. Bioinformatics. 39(Supplement_1). i222–i231. 8 indexed citations
9.
Sahlin, Kristoffer, et al.. (2023). A survey of mapping algorithms in the long-reads era. Genome biology. 24(1). 133–133. 24 indexed citations
10.
Sahlin, Kristoffer. (2022). Strobealign: flexible seed size enables ultra-fast and accurate read alignment. Genome biology. 23(1). 260–260. 37 indexed citations
11.
Pomerantz, Aaron, Kristoffer Sahlin, Adeline Seah, et al.. (2022). Rapid in situ identification of biological specimens via DNA amplicon sequencing using miniaturized laboratory equipment. Nature Protocols. 17(6). 1415–1443. 29 indexed citations
12.
Sahlin, Kristoffer & Veli Mäkinen. (2021). Accurate spliced alignment of long RNA sequencing reads. Bioinformatics. 37(24). 4643–4651. 23 indexed citations
13.
Sahlin, Kristoffer. (2021). Effective sequence similarity detection with strobemers. Genome Research. 31(11). 2080–2094. 39 indexed citations
14.
Sahlin, Kristoffer & Paul Medvedev. (2021). Author Correction: Error correction enables use of Oxford Nanopore technology for reference-free transcriptome analysis. Nature Communications. 12(1). 992–992. 8 indexed citations
15.
Sahlin, Kristoffer & Paul Medvedev. (2020). De Novo Clustering of Long-Read Transcriptome Data Using a Greedy, Quality Value-Based Algorithm. Journal of Computational Biology. 27(4). 472–484. 55 indexed citations
16.
Tomaszkiewicz, Marta, et al.. (2019). DiscoverY: a classifier for identifying Y chromosome sequences in male assemblies. BMC Genomics. 20(1). 641–641. 14 indexed citations
17.
Sahlin, Kristoffer, Marta Tomaszkiewicz, Kateryna D. Makova, & Paul Medvedev. (2018). Deciphering highly similar multigene family transcripts from Iso-Seq data with IsoCon. Nature Communications. 9(1). 4601–4601. 36 indexed citations
18.
Sahlin, Kristoffer, Rayan Chikhi, & Lars Arvestad. (2016). Assembly scaffolding with PE-contaminated mate-pair libraries. Bioinformatics. 32(13). 1925–1932. 28 indexed citations
19.
Salmela, Leena, Kristoffer Sahlin, Veli Mäkinen, & Alexandru I. Tomescu. (2016). Gap Filling as Exact Path Length Problem. Journal of Computational Biology. 23(5). 347–361. 12 indexed citations
20.
Sahlin, Kristoffer, Francesco Vezzi, Björn Nystedt, Joakim Lundeberg, & Lars Arvestad. (2014). BESST - Efficient scaffolding of large fragmented assemblies. BMC Bioinformatics. 15(1). 281–281. 97 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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