John Karro

2.9k total citations · 1 hit paper
23 papers, 843 citations indexed

About

John Karro is a scholar working on Molecular Biology, Plant Science and Artificial Intelligence. According to data from OpenAlex, John Karro has authored 23 papers receiving a total of 843 indexed citations (citations by other indexed papers that have themselves been cited), including 12 papers in Molecular Biology, 6 papers in Plant Science and 4 papers in Artificial Intelligence. Recurrent topics in John Karro's work include Genomics and Phylogenetic Studies (8 papers), RNA and protein synthesis mechanisms (8 papers) and Chromosomal and Genetic Variations (5 papers). John Karro is often cited by papers focused on Genomics and Phylogenetic Studies (8 papers), RNA and protein synthesis mechanisms (8 papers) and Chromosomal and Genetic Variations (5 papers). John Karro collaborates with scholars based in United States, Canada and Austria. John Karro's co-authors include Mark Gerstein, Daniel Golovin, Greg Kochanski, Subhodeep Moitra, Zhaolei Zhang, Deyou Zheng, D. Sculley, Nicholas Carriero, Paul M. Harrison and Philip Cayting and has published in prestigious journals such as Nucleic Acids Research, Bioinformatics and Journal of Molecular Biology.

In The Last Decade

John Karro

23 papers receiving 808 citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Google Vizier

2017 286 citations Daniel Golovin, Subhodeep Moitra et al. profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
John Karro United States	10	434	201	158	116	74	23	843
Alexander Schliep Germany	21	1.0k 2.4×	470 2.3×	79 0.5×	180 1.6×	132 1.8×	61	1.6k
Brandon Malone United States	13	291 0.7×	168 0.8×	94 0.6×	39 0.3×	33 0.4×	29	605
João Meidânis Brazil	12	455 1.0×	254 1.3×	187 1.2×	321 2.8×	24 0.3×	39	818
Rui Kuang United States	24	987 2.3×	249 1.2×	51 0.3×	77 0.7×	90 1.2×	74	1.6k
Georgina Stegmayer Argentina	18	411 0.9×	143 0.7×	129 0.8×	29 0.3×	49 0.7×	70	825
Huai‐Kuang Tsai Taiwan	17	530 1.2×	172 0.9×	55 0.3×	53 0.5×	35 0.5×	58	801
Mingzhou Song United States	17	432 1.0×	150 0.7×	656 4.2×	98 0.8×	85 1.1×	66	1.4k
Chun-Hsi Huang United States	13	428 1.0×	116 0.6×	37 0.2×	95 0.8×	22 0.3×	61	686
Hong Qin United States	17	731 1.7×	140 0.7×	89 0.6×	143 1.2×	76 1.0×	83	1.2k
Seonwoo Min South Korea	17	1.7k 3.9×	262 1.3×	164 1.0×	261 2.3×	89 1.2×	32	2.3k

Countries citing papers authored by John Karro

Since Specialization

Citations

This map shows the geographic impact of John Karro's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by John Karro with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites John Karro more than expected).

Fields of papers citing papers by John Karro

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by John Karro. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by John Karro. The network helps show where John Karro may publish in the future.

Co-authorship network of co-authors of John Karro

This figure shows the co-authorship network connecting the top 25 collaborators of John Karro. A scholar is included among the top collaborators of John Karro based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with John Karro. John Karro is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

Sort: Min cites: Since: Top N: Style:

20 of 20 papers shown

1.

Golovin, Daniel, et al.. (2020). Gradientless Descent: High-Dimensional Zeroth-Order Optimization. arXiv (Cornell University). 7 indexed citations

2.

Golovin, Daniel, Greg Kochanski, & John Karro. (2017). Black Box Optimization via a Bayesian-Optimized Genetic Algorithm. 2 indexed citations

3.

Golovin, Daniel, et al.. (2017). Bayesian Optimization for a Better Dessert. 8 indexed citations

4.

Liu, Xiaolin, et al.. (2016). phRAIDER: Pattern-Hunter based Rapid Ab Initio Detection of Elementary Repeats. Bioinformatics. 32(12). i209–i215. 13 indexed citations

5.

Suarez, Scott A., et al.. (2013). A comparison of computer‐generated and naturally occurring foraging patterns in route‐network‐constrained spider monkeys. American Journal of Primatology. 76(5). 460–471. 9 indexed citations

6.

Karro, John, et al.. (2013). A MATLAB-based tool for accurate detection of perfect overlapping and nested inverted repeats in DNA sequences. Bioinformatics. 30(6). 887–888. 14 indexed citations

7.

Sun, Zhou, Guoli Ji, Xiaolin Liu, et al.. (2012). Pattern analysis approach reveals restriction enzyme cutting abnormalities and other cDNA library construction artifacts using raw EST data. BMC Biotechnology. 12(1). 16–16. 3 indexed citations

8.

Liang, Chun, et al.. (2010). PEACE: Parallel Environment for Assembly and Clustering of Gene Expression. Nucleic Acids Research. 38(suppl_2). W737–W742. 8 indexed citations

9.

Imamura, Hideo, John Karro, & Jeffrey H. Chuang. (2009). Weak preservation of local neutral substitution rates across mammalian genomes. BMC Evolutionary Biology. 9(1). 89–89. 7 indexed citations

10.

Tyekucheva, Svitlana, Kateryna D. Makova, John Karro, et al.. (2008). Human-macaque comparisons illuminate variation in neutral substitution rates. Genome biology. 9(4). R76–R76. 42 indexed citations

11.

Peifer, Martin, John Karro, & H. H. von Grünberg. (2008). Is there an acceleration of the CpG transition rate during the mammalian radiation?. Bioinformatics. 24(19). 2157–2164. 7 indexed citations

12.

Karro, John, Martin Peifer, Ross C. Hardison, Martina Kollmann, & H. H. von Grünberg. (2007). Exponential Decay of GC Content Detected by Strand-Symmetric Substitution Rates Influences the Evolution of Isochore Structure. Molecular Biology and Evolution. 25(2). 362–374. 16 indexed citations

13.

Karro, John, Deyou Zheng, Zhaolei Zhang, et al.. (2006). Pseudogene.org: a comprehensive database and comparison platform for pseudogene annotation. Nucleic Acids Research. 35(suppl_1). D55–D60. 137 indexed citations

14.

Zhang, Zhaolei, Nicholas Carriero, Deyou Zheng, et al.. (2006). PseudoPipe: an automated pseudogene identification pipeline. Bioinformatics. 22(12). 1437–1439. 133 indexed citations

15.

Bertone, Paul, Valery Trifonov, Joel Rozowsky, et al.. (2005). Design optimization methods for genomic DNA tiling arrays. Genome Research. 16(2). 271–281. 37 indexed citations

16.

Zheng, Deyou, Zhaolei Zhang, Paul M. Harrison, et al.. (2005). Integrated Pseudogene Annotation for Human Chromosome 22: Evidence for Transcription. Journal of Molecular Biology. 349(1). 27–45. 61 indexed citations

17.

Karro, John & James P. Cohoon. (2003). A Spiffy tool for the simultaneous placement and global routing for three-dimensional field-programmable gate arrays. 230–231. 6 indexed citations

18.

Alexander, Michael J., et al.. (2002). Three-dimensional field-programmable gate arrays. 253–256. 38 indexed citations

19.

Pfaltz, John L. & John Karro. (1998). Transformations of Antimatroid Closure Spaces. Libra. 1 indexed citations

20.

Cohoon, James P., et al.. (1998). <title>Perturbation method for probabilistic search for the traveling salesperson problem</title>. Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE. 3455. 118–127. 5 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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