John E. Allen

1.2k total citations
14 papers, 882 citations indexed

About

John E. Allen is a scholar working on Molecular Biology, Artificial Intelligence and Cell Biology. According to data from OpenAlex, John E. Allen has authored 14 papers receiving a total of 882 indexed citations (citations by other indexed papers that have themselves been cited), including 7 papers in Molecular Biology, 2 papers in Artificial Intelligence and 2 papers in Cell Biology. Recurrent topics in John E. Allen's work include Speech and dialogue systems (2 papers), Multi-Agent Systems and Negotiation (2 papers) and Hippo pathway signaling and YAP/TAZ (2 papers). John E. Allen is often cited by papers focused on Speech and dialogue systems (2 papers), Multi-Agent Systems and Negotiation (2 papers) and Hippo pathway signaling and YAP/TAZ (2 papers). John E. Allen collaborates with scholars based in United States, Switzerland and Germany. John E. Allen's co-authors include Curry Guinn, Gavin MacBeath, Michael A. Stiffler, Viara Grantcharova, Ying Lei, Mary Wilson, Mark L. Eberhard, Andrew Gordus, Ethan S. Karp and Alexis Kaushansky and has published in prestigious journals such as Science, Journal of Biological Chemistry and Nature Biotechnology.

In The Last Decade

John E. Allen

14 papers receiving 848 citations

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
John E. Allen United States	8	507	139	136	77	65	14	882
Kevin Yang United States	23	1.0k 2.0×	121 0.9×	139 1.0×	45 0.6×	43 0.7×	64	1.8k
Anne R. Haake United States	20	571 1.1×	353 2.5×	116 0.9×	23 0.3×	96 1.5×	59	1.5k
Chris Miles United States	9	636 1.3×	75 0.5×	106 0.8×	55 0.7×	44 0.7×	12	1.2k
Myungho Lee South Korea	13	534 1.1×	114 0.8×	40 0.3×	124 1.6×	22 0.3×	46	1.1k
Brett Milash United States	19	841 1.7×	91 0.7×	123 0.9×	16 0.2×	67 1.0×	33	1.9k
Yu Shi United States	17	781 1.5×	31 0.2×	209 1.5×	109 1.4×	28 0.4×	49	1.5k
Dileep George United States	18	113 0.2×	61 0.4×	340 2.5×	39 0.5×	30 0.5×	42	1.3k
Jingyi Jessica Li United States	29	2.4k 4.8×	70 0.5×	190 1.4×	67 0.9×	32 0.5×	98	3.2k
Michael Paul Japan	18	240 0.5×	57 0.4×	457 3.4×	28 0.4×	34 0.5×	62	941

Countries citing papers authored by John E. Allen

Since Specialization

Citations

This map shows the geographic impact of John E. Allen's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by John E. Allen with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites John E. Allen more than expected).

Fields of papers citing papers by John E. Allen

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by John E. Allen. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by John E. Allen. The network helps show where John E. Allen may publish in the future.

Co-authorship network of co-authors of John E. Allen

This figure shows the co-authorship network connecting the top 25 collaborators of John E. Allen. A scholar is included among the top collaborators of John E. Allen based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with John E. Allen. John E. Allen is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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14 of 14 papers shown

Hass, Helge, Kristina Masson, Violette Paragas, et al.. (2017). Predicting ligand-dependent tumors from multi-dimensional signaling features. npj Systems Biology and Applications. 3(1). 27–27. 31 indexed citations

Allen, John E., Brian C. Russo, Soo Young Lee, et al.. (2014). Systematic Analysis of Bacterial Effector-Postsynaptic Density 95/Disc Large/Zonula Occludens-1 (PDZ) Domain Interactions Demonstrates Shigella OspE Protein Promotes Protein Kinase C Activation via PDLIM Proteins. Journal of Biological Chemistry. 289(43). 30101–30113. 14 indexed citations

Kaushansky, Alexis, John E. Allen, Andrew Gordus, et al.. (2010). Quantifying protein–protein interactions in high throughput using protein domain microarrays. Nature Protocols. 5(4). 773–790. 62 indexed citations

Allen, John E., et al.. (2008). Predicting PDZ domain–peptide interactions from primary sequences. Nature Biotechnology. 26(9). 1041–1045. 115 indexed citations

Mettu, Niharika B., Thomas B. Stanley, Mary A. Dwyer, et al.. (2007). The Nuclear Receptor-Coactivator Interaction Surface as a Target for Peptide Antagonists of the Peroxisome Proliferator-Activated Receptors. Molecular Endocrinology. 21(10). 2361–2377. 33 indexed citations

Splan, Kathryn E., John E. Allen, & George McLendon. (2007). Biochemical Basis for Enhanced Binding of Peptide Dimers to X-Linked Inhibitor of Apoptosis Protein. Biochemistry. 46(42). 11938–11944. 7 indexed citations

Stiffler, Michael A., et al.. (2007). PDZ Domain Binding Selectivity Is Optimized Across the Mouse Proteome. Science. 317(5836). 364–369. 307 indexed citations

Allen, John E. & George McLendon. (2006). Tryptophan and tyrosine to terbium fluorescence resonance energy transfer as a method to “map” aromatic residues and monitor docking. Biochemical and Biophysical Research Communications. 349(4). 1264–1268. 7 indexed citations

Allen, John E.. (2005). Towards robust agent-based dialogue systems. 1 indexed citations

10.

Wilson, Mary, et al.. (2001). Gongylonema Infection of the Mouth in a Resident of Cambridge, Massachusetts. Clinical Infectious Diseases. 32(9). 1378–1380. 38 indexed citations

11.

Allen, John E., et al.. (1999). Mixed-initiative interaction. IEEE Intelligent Systems and their Applications. 14(5). 14–23. 258 indexed citations

12.

Allen, John E., et al.. (1988). Caring for Julie.. Nursing times. 84(2). 25–9. 2 indexed citations

13.

Allen, John E.. (1969). Fluid areas of the verb in modern written Russian : a study in computational linguistics. Medical Entomology and Zoology. 1 indexed citations

14.

Allen, John E., et al.. (1964). Machine Translation: The State of the Art, 1964. American Behavioral Scientist. 7(10). 9–11. 6 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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