James Han

3.6k citations

55 papers · 1.3k indexed · h-index 15

Impact in

Pollution top 2%
- Microbial bioremediation and biosurfactants
- Oil Spill Detection and Mitigation
Ecology top 5%
- Microbial Community Ecology and Physiology

Papers in ⓘ

Ecology 21
- Microbial Community Ecology and Physiology 21
Molecular Biology 35
- Genomics and Phylogenetic Studies 31
- Protist diversity and phylogeny 6

Co-authors: Tanja Woyke (37 shared papers)Olivia U. Mason (3 shared papers)Janet Jansson (3 shared papers)Susannah G. Tringe (1 shared paper)Regina Lamendella (2 shared papers)Hoi‐Ying N. Holman (2 shared papers)Rachel Mackelprang (2 shared papers)Sharon Borglin (2 shared papers)
Journals: Journal of Bacteriology (7 papers)Standards in Genomic Sciences (24 papers)The ISME Journal (2 papers)Cancer Research (1 paper)Genetics Research (1 paper)
Partner nations: United States Germany Saudi Arabia

In The Last Decade

James Han

51 papers receiving 1.3k citations

Peers

Countries citing papers authored by James Han

Since Specialization

Citations

This map shows the geographic impact of James Han's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by James Han with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites James Han more than expected).

Fields of papers citing papers by James Han

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by James Han. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by James Han. The network helps show where James Han may publish in the future.

Co-authors

The 25 scholars most cited alongside James Han, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with James Han Line = papers co-authored together James Han links everyone, so they are left out of the graph.

All Works

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20 of 20 papers shown

Showing the 20 most-cited of 55 papers — load more, or switch the sort, to bring in the rest.

#	Work
1	Metagenome, metatranscriptome and single-cell sequencing reveal microbial response to Deepwater Horizon oil spill The ISME Journal ·Olivia U. Mason, Terry C. Hazen, Sharon Borglin, Patrick Chain, Eric A. Dubinsky, Julian L. Fortney, James Han, Hoi‐Ying N. Holman, Jenni Hultman, Regina Lamendella, Rachel Mackelprang, Stephanie Malfatti, Lauren M. Tom, Susannah G. Tringe, Tanja Woyke, Jizhong Zhou, Edward M. Rubin, Janet Jansson	2012	418
2	Genome sequencing of four Aureobasidium pullulans varieties: biotechnological potential, stress tolerance, and description of new species BMC Genomics ·Cene Gostinčar, Robin A. Ohm, Tina Kogej, Silva Sonjak, Martina Turk, Janja Zajc, Polona Zalar, Martín Grube, Hui Sun, James Han, Aditi Sharma, Jennifer Chiniquy, Chew Yee Ngan, Anna Lipzen, Kerrie Barry, Igor V. Grigoriev, Nina Gunde‐Cimerman	2014	270
3	Single-cell genomics reveals features of a Colwellia species that was dominant during the Deepwater Horizon oil spill Frontiers in Microbiology ·Olivia U. Mason, James Han, Tanja Woyke, Janet Jansson	2014	91
4	Draft genome sequence of Halomonas lutea strain YIM 91125T (DSM 23508T) isolated from the alkaline Lake Ebinur in Northwest China Standards in Genomic Sciences ·Xiaoyang Gao, Zhi Xiao, Hong-Wei Li, Yu Zhou, Alla Lapidus, James Han, Matthew Haynes, Elizabeth A. Lobos, Marcel Huntemann, Amrita Pati, Natalia Ivanova, Konstantinos Mavromatis, Brian J. Tindall, Victor Markowitz, Tanja Woyke, Hans-Peter Klenk, Nikos C. Kyrpides, Wen-Jun Li	2015	72
5	ProDeGe: a computational protocol for fully automated decontamination of genomes The ISME Journal ·Kristin Tennessen, Evan Andersen, Scott Clingenpeel, Christian Rinke, Derek S. Lundberg, James Han, Jeff Dangl, Natalia Ivanova, Tanja Woyke, Nikos C. Kyrpides, Amrita Pati	2015	56
6	Genome Sequence of Amycolatopsis sp. Strain ATCC 39116, a Plant Biomass-Degrading Actinomycete Journal of Bacteriology ·Jennifer R. Davis, Lynne Goodwin, Tanja Woyke, Hazuki Teshima, David Bruce, Chris Detter, Roxanne Tapia, Cliff Han, James Han, Sam Pitluck, Matt Nolan, Natalia Mikhailova, Miriam Land, Jason K. Sello	2012	37
7	Complete genome sequence of Parvibaculum lavamentivorans type strain (DS-1T) Standards in Genomic Sciences ·David Schleheck, Michael Weiß, Sam Pitluck, David Bruce, Miriam Land, Cliff Han, Elizabeth Saunders, Roxanne Tapia, Chris Detter, Thomas Brettin, James Han, Tanja Woyke, Lynne Goodwin, L Pennacchio, Matt Nolan, Alasdair M. Cook, Staffan Kjelleberg, Torsten Thomas	2011	33
8	Phylogenetic, genomic organization and expression analysis of hydrophobin genes in the ectomycorrhizal basidiomycete Laccaria bicolor Fungal Genetics and Biology ·Jonathan M. Plett, Julien Gibon, Annegret Kohler, Kecia Duffy, Patrik J. Hoegger, Rajesh Velagapudi, James Han, Ursula Kües, Igor V. Grigoriev, Francis Martin	2012	29
9	Preservation of glial cytoarchitecture from ex vivo human tumor and non-tumor cerebral cortical explants: A human model to study neurological diseases Journal of Neuroscience Methods ·Kaisorn L. Chaichana, Vivian Capilla‐González, Óscar González-Pérez, Gustavo Pradilla, James Han, Alessandro Olivi, Henry Brem, José Manuel García‐Verdugo, Alfredo Quiñones‐Hinojosa	2007	22
10	High-Quality Draft Genome Sequence of the Opitutaceae Bacterium Strain TAV1, a Symbiont of the Wood-Feeding Termite Reticulitermes flavipes Journal of Bacteriology ·Jantiya Isanapong, Leslie O. Goodwin, David Bruce, Alice P. Chen, Chris Detter, James Han, Cliff Han, Brigitte Held, Marcel Huntemann, Natalia Ivanova, Miriam Land, Konstantinos Mavromatis, Matt Nolan, A. Pati, L Pennacchio, Samuel Pitluck, Ernest Szeto, Roxanne Tapia, Tanja Woyke, Jorge L. Mazza Rodrigues	2012	19
11	Comprehensive genome analysis and variant detection at scale using DRAGEN Nature Biotechnology ·Sairam Behera, Severine Catreux, Massimiliano Rossi, Sean Truong, Zhuoyi Huang, Michael Ruehle, Arun Visvanath, Gavin Parnaby, Cooper Roddey, Vitor Onuchic, Andrea Finocchio, Daniel Cameron, Adam C. English, Shyamal Mehtalia, James Han, Rami Mehio, Fritz J. Sedlazeck	2024	18
12	Complete Genome Sequence of Rahnella aquatilis CIP 78.65 Journal of Bacteriology ·Robert J. Martinez, David Bruce, Chris Detter, Lynne Goodwin, James Han, Cliff Han, Brittany Held, Miriam Land, Natalia Mikhailova, Matt Nolan, L Pennacchio, Sam Pitluck, Roxanne Tapia, Tanja Woyke, Patricia A. Sobecky	2012	17
13	Complete Genome Sequence of the Anaerobic, Halophilic Alkalithermophile Natranaerobius thermophilus JW/NM-WN-LF Journal of Bacteriology ·Baisuo Zhao, Noha M. Mesbah, Eileen Dalin, Lynne Goodwin, Matt Nolan, Sam Pitluck, Olga Chertkov, Thomas Brettin, James Han, Frank W. Larimer, Miriam Land, Loren Hauser, Nikos C. Kyrpides, Juergen Wiegel	2011	17
14	Improved Marker Combination for Detection of De Novo Genetic Variation and Aberrant DNA in Colorectal Neoplasia Clinical Chemistry ·Lisa Kann, James Han, David A. Ahlquist, Theodore R. Levin, Douglas K. Rex, Duncan Whitney, Sanford D. Markowitz, Anthony P. Shuber	2006	16
15	Complete Genome Sequence of Micromonospora Strain L5, a Potential Plant-Growth-Regulating Actinomycete, Originally Isolated from Casuarina equisetifolia Root Nodules Genome Announcements ·Ann M. Hirsch, J.I. Merchan Alvarado, David Bruce, Olga Chertkov, Peter L. De Hoff, John C. Detter, Nancy A. Fujishige, Lynne Goodwin, James Han, Cliff Han, Natalia Ivanova, Miriam Land, Michelle R. Lum, Nima Milani‐Nejad, Matt Nolan, Amrita Pati, Sam Pitluck, Stephen Tran, Tanja Woyke, María Valdés	2013	15
16	Genome sequence of Ensifer sp. TW10; a Tephrosia wallichii (Biyani) microsymbiont native to the Indian Thar Desert Standards in Genomic Sciences ·Nisha Tak, Hukam S. Gehlot, Muskan Kaushik, Sunil Choudhary, Ravi Tiwari, Rui Tian, Yvette Hill, Lambert Bräu, Lynne Goodwin, James Han, Konstantinos Liolios, Marcel Huntemann, Krishna Palaniappan, Amrita Pati, Konstantinos Mavromatis, Natalia Ivanova, Victor Markowitz, Tanja Woyke, Nikos C. Kyrpides, Wayne Reeve	2013	14
17	Genome sequence of Ensifer meliloti strain WSM1022; a highly effective microsymbiont of the model legume Medicago truncatula A17 Standards in Genomic Sciences ·Jason J. Terpolilli, Yvette Hill, Rui Tian, John Howieson, Lambert Bräu, Lynne Goodwin, James Han, Konstantinos Liolios, Marcel Huntemann, Amrita Pati, Tanja Woyke, Konstantinos Mavromatis, Victor Markowitz, Natalia Ivanova, Nikos C. Kyrpides, Wayne Reeve	2013	14
18	Genome Sequence of Kosmotoga olearia Strain TBF 19.5.1, a Thermophilic Bacterium with a Wide Growth Temperature Range, Isolated from the Troll B Oil Platform in the North Sea Journal of Bacteriology ·Kristen S. Swithers, J. L. DiPippo, David Bruce, Christopher Detter, Roxanne Tapia, Cliff Han, Lynne Goodwin, James Han, Tanja Woyke, Sam Pitluck, L Pennacchio, Matthew J. Nolan, Natalia Mikhailova, Miriam Land, Camilla Nesbø, J. Peter Gogarten, Kenneth M. Noll	2011	14
19	DUK - A Fast and Efficient Kmer Based Sequence Matching Tool University of North Texas Digital Library (University of North Texas) ·Mingkun Li, Alex Copeland, James Han	2011	13
20	High quality draft genome sequence of Flavobacterium rivuli type strain WB 3.3-2T (DSM 21788T), a valuable source of polysaccharide decomposing enzymes Standards in Genomic Sciences ·Richard L. Hahnke, Erko Stackebrandt, Jan P. Meier‐Kolthoff, Brian J. Tindall, Sixing Huang, Manfred Rohde, Alla Lapidus, James Han, Stephan Trong, Matthew Haynes, T. B. K. Reddy, Marcel Huntemann, Amrita Pati, Natalia Ivanova, Konstantinos Mavromatis, Victor Markowitz, Tanja Woyke, Markus Göker, Nikos C. Kyrpides, Hans‐Peter Klenk	2015	12

About James Han

James Han is a scholar working on Ecology, Molecular Biology, Plant Science, Endocrinology and Pollution, having authored 55 papers that have together received 1.3k indexed citations. Recurring topics across this work include Genomics and Phylogenetic Studies (31 papers), Microbial Community Ecology and Physiology (21 papers), Legume Nitrogen Fixing Symbiosis (11 papers), Protist diversity and phylogeny (6 papers), Mycorrhizal Fungi and Plant Interactions (4 papers), Microbial bioremediation and biosurfactants (3 papers), Nematode management and characterization studies (3 papers) and Plant-Microbe Interactions and Immunity (3 papers). The work is most often cited by research in Pollution (338 citations), Ecology (481 citations), Environmental Chemistry (142 citations), Biotechnology (94 citations) and Plant Science (321 citations). James Han has collaborated with scholars based in United States, Germany and Saudi Arabia. Frequent co-authors include Tanja Woyke, Olivia U. Mason, Janet Jansson, Susannah G. Tringe, Regina Lamendella, Hoi‐Ying N. Holman, Rachel Mackelprang, Sharon Borglin, Julian L. Fortney and Eric A. Dubinsky. Their work appears in journals such as Journal of Bacteriology, Standards in Genomic Sciences, The ISME Journal, Cancer Research and Genetics Research.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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