Gabriele Ausiello

2.3k total citations · 1 hit paper
45 papers, 1.7k citations indexed

About

Gabriele Ausiello is a scholar working on Molecular Biology, Materials Chemistry and Spectroscopy. According to data from OpenAlex, Gabriele Ausiello has authored 45 papers receiving a total of 1.7k indexed citations (citations by other indexed papers that have themselves been cited), including 43 papers in Molecular Biology, 17 papers in Materials Chemistry and 7 papers in Spectroscopy. Recurrent topics in Gabriele Ausiello's work include Protein Structure and Dynamics (25 papers), Enzyme Structure and Function (17 papers) and RNA and protein synthesis mechanisms (16 papers). Gabriele Ausiello is often cited by papers focused on Protein Structure and Dynamics (25 papers), Enzyme Structure and Function (17 papers) and RNA and protein synthesis mechanisms (16 papers). Gabriele Ausiello collaborates with scholars based in Italy, France and Germany. Gabriele Ausiello's co-authors include Manuela Helmer‐Citterich, Gianni Cesareni, Andreas Zanzoni, Florencio Pazos, Alfonso Valencia, Luisa Montecchi‐Palazzi, Pier Federico Gherardini, Fabrizio Ferrè, Luca Parca and Allegra Via and has published in prestigious journals such as Nucleic Acids Research, Bioinformatics and PLoS ONE.

In The Last Decade

Gabriele Ausiello

42 papers receiving 1.7k citations

Hit Papers

MINT: a Molecular INTeraction database 2001 2026 2009 2017 2001 100 200 300 400 500
What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

  1. MINT: a Molecular INTeraction database
    2001 571 citations Andreas Zanzoni, Luisa Montecchi‐Palazzi et al. FEBS Letters profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name h Career Trend Papers Cites
Gabriele Ausiello Italy 18 1.5k 325 266 122 105 45 1.7k
Xin‐Qiu Yao United States 18 1.2k 0.8× 230 0.7× 225 0.8× 88 0.7× 140 1.3× 47 1.6k
Anatoly Sorokin Russia 17 1.5k 1.0× 194 0.6× 207 0.8× 162 1.3× 156 1.5× 93 1.9k
Timothy R. Lezon United States 13 1.3k 0.8× 203 0.6× 334 1.3× 141 1.2× 93 0.9× 24 1.6k
Arnaud Céol Italy 19 2.5k 1.6× 539 1.7× 149 0.6× 186 1.5× 201 1.9× 30 2.7k
Domenico Cozzetto United Kingdom 16 1.9k 1.2× 211 0.6× 482 1.8× 95 0.8× 142 1.4× 31 2.1k
Marcin J. Mizianty Canada 26 2.4k 1.5× 287 0.9× 619 2.3× 164 1.3× 135 1.3× 35 2.8k
Nurcan Tunçbağ Türkiye 22 1.9k 1.2× 530 1.6× 310 1.2× 85 0.7× 128 1.2× 50 2.4k
Simone Fulle Germany 17 927 0.6× 622 1.9× 342 1.3× 83 0.7× 57 0.5× 30 1.5k
Faruck Morcos United States 24 2.3k 1.5× 186 0.6× 389 1.5× 131 1.1× 412 3.9× 66 2.7k
Anurag Sethi United States 20 1.3k 0.8× 189 0.6× 148 0.6× 65 0.5× 158 1.5× 35 1.7k

Countries citing papers authored by Gabriele Ausiello

Since Specialization
Citations

This map shows the geographic impact of Gabriele Ausiello's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Gabriele Ausiello with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Gabriele Ausiello more than expected).

Fields of papers citing papers by Gabriele Ausiello

Since Specialization
Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Gabriele Ausiello. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Gabriele Ausiello. The network helps show where Gabriele Ausiello may publish in the future.

Co-authorship network of co-authors of Gabriele Ausiello

This figure shows the co-authorship network connecting the top 25 collaborators of Gabriele Ausiello. A scholar is included among the top collaborators of Gabriele Ausiello based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Gabriele Ausiello. Gabriele Ausiello is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

20 of 20 papers shown
1.
Pepe, Gerardo, et al.. (2025). PANDA: PAN Cancer Data Analysis Web Tool. Journal of Molecular Biology. 437(15). 169158–169158.
2.
Pepe, Gerardo, et al.. (2024). A Meta-Analysis Approach to Gene Regulatory Network Inference Identifies Key Regulators of Cardiovascular Diseases. International Journal of Molecular Sciences. 25(8). 4224–4224. 1 indexed citations
3.
Pepe, Gerardo, et al.. (2022). Variation in the co-expression profile highlights a loss of miRNA-mRNA regulation in multiple cancer types. Non-coding RNA Research. 7(2). 98–105. 2 indexed citations
4.
Pepe, Gerardo, et al.. (2022). Evaluation of potential miRNA sponge effects of SARS genomes in human. Non-coding RNA Research. 7(1). 48–53. 9 indexed citations
5.
Pietrosanto, Marco, Andrea Guarracino, Fabrizio Ferrè, et al.. (2021). Relative Information Gain: Shannon entropy-based measure of the relative structural conservation in RNA alignments. NAR Genomics and Bioinformatics. 3(1). lqab007–lqab007. 5 indexed citations
6.
Guarracino, Andrea, Gerardo Pepe, Marco Pietrosanto, et al.. (2021). BRIO: a web server for RNA sequence and structure motif scan. Nucleic Acids Research. 49(W1). W67–W71. 14 indexed citations
7.
Janson, Giacomo, Alessandro Grottesi, Marco Pietrosanto, et al.. (2019). Revisiting the “satisfaction of spatial restraints” approach of MODELLER for protein homology modeling. PLoS Computational Biology. 15(12). e1007219–e1007219. 11 indexed citations
8.
Pietrosanto, Marco, et al.. (2017). BEAM web server: a tool for structural RNA motif discovery. Bioinformatics. 34(6). 1058–1060. 9 indexed citations
9.
Colantoni, Alessio, Valerio Bianchi, Pier Federico Gherardini, et al.. (2013). Alternative splicing tends to avoid partial removals of protein-protein interaction sites. BMC Genomics. 14(1). 379–379. 3 indexed citations
10.
Bianchi, Valerio, Pier Federico Gherardini, Manuela Helmer‐Citterich, & Gabriele Ausiello. (2012). Identification of binding pockets in protein structures using a knowledge-based potential derived from local structural similarities. BMC Bioinformatics. 13(S4). S17–S17. 14 indexed citations
11.
Gherardini, Pier Federico, Gabriele Ausiello, & Manuela Helmer‐Citterich. (2010). Superpose3D: A Local Structural Comparison Program That Allows for User-Defined Structure Representations. PLoS ONE. 5(8). e11988–e11988. 13 indexed citations
12.
Ausiello, Gabriele, et al.. (2009). Structural motifs recurring in different folds recognize the same ligand fragments. BMC Bioinformatics. 10(1). 182–182. 12 indexed citations
13.
Peluso, Daniele, et al.. (2007). SH3-Hunter: discovery of SH3 domain interaction sites in proteins. Nucleic Acids Research. 35(Web Server). W451–W454. 29 indexed citations
14.
Ausiello, Gabriele, Daniele Peluso, Allegra Via, & Manuela Helmer‐Citterich. (2007). Local comparison of protein structures highlights cases of convergent evolution in analogous functional sites. BMC Bioinformatics. 8(S1). S24–S24. 18 indexed citations
15.
Ausiello, Gabriele, Andreas Zanzoni, Daniele Peluso, A. Via, & Manuela Helmer‐Citterich. (2005). pdbFun: mass selection and fast comparison of annotated PDB residues. Nucleic Acids Research. 33(Web Server). W133–W137. 22 indexed citations
16.
Via, Allegra, et al.. (2005). A neural strategy for the inference of SH3 domain-peptide interaction specificity. BMC Bioinformatics. 6(S4). S13–S13. 7 indexed citations
17.
Ferrè, Fabrizio, Gabriele Ausiello, Andreas Zanzoni, & Manuela Helmer‐Citterich. (2005). Functional annotation by identification of local surface similarities: a novel tool for structural genomics. BMC Bioinformatics. 6(1). 194–194. 28 indexed citations
18.
Zanzoni, Andreas, et al.. (2001). MINT: a Molecular INTeraction database. FEBS Letters. 513(1). 135–140. 571 indexed citations breakdown →
19.
Pazos, Florencio, Manuela Helmer‐Citterich, Gabriele Ausiello, & Alfonso Valencia. (1997). Correlated mutations contain information about protein-protein interaction 1 1Edited by A. R. Fersht. Journal of Molecular Biology. 271(4). 511–523. 401 indexed citations
20.
Ausiello, Gabriele, Gianni Cesareni, & Manuela Helmer‐Citterich. (1997). Escher: A new docking procedure applied to the reconstruction of protein tertiary structure. Proteins Structure Function and Bioinformatics. 28(4). 556–567. 50 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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