Éric Bonnet

5.9k citations

33 papers · 2.7k indexed · 1 hit paper · h-index 19

Impact in

Plant Science top 2%
- Plant Molecular Biology Research
- Chromosomal and Genetic Variations
- Plant Stress Responses and Tolerance
Cancer Research top 5%
- MicroRNA in disease regulation

Papers in ⓘ

Aging 1
Virology 2

Co-authors: Yves Van de Peer (10 shared papers)Pierre Rouzé (4 shared papers)J. Wuyts (2 shared papers)Ying He (1 shared paper)Kenny Billiau (1 shared paper)Laurence Calzone (8 shared papers)Tom Michoel (5 shared papers)Yvan Saeys (2 shared papers)
Journals: Bioinformatics (5 papers)Scientific Reports (3 papers)PLoS ONE (2 papers)Database (1 paper)Oncogenesis (1 paper)
Partner nations: France Belgium United Kingdom

In The Last Decade

Éric Bonnet

32 papers receiving 2.6k citations

Hit Papers

align trajectories log scale

zt: A Software Tool for Simple and Partial Mantel Tests 2002 · 641 citations

Peers

Countries citing papers authored by Éric Bonnet

Since Specialization

Citations

This map shows the geographic impact of Éric Bonnet's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Éric Bonnet with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Éric Bonnet more than expected).

Fields of papers citing papers by Éric Bonnet

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Éric Bonnet. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Éric Bonnet. The network helps show where Éric Bonnet may publish in the future.

Co-authors

The 25 scholars most cited alongside Éric Bonnet, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with Éric Bonnet Line = papers co-authored together Éric Bonnet links everyone, so they are left out of the graph.

All Works

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20 of 20 papers shown

Showing the 20 most-cited of 33 papers — load more, or switch the sort, to bring in the rest.

#	Work
1	zt: A Software Tool for Simple and Partial Mantel Tests Journal of Statistical Software ·Éric Bonnet, Yves Van de Peer Hit paper breakdown →	2002	641
2	Evidence that microRNA precursors, unlike other non-coding RNAs, have lower folding free energies than random sequences Bioinformatics ·Éric Bonnet, J. Wuyts, Pierre Rouzé, Yves Van de Peer	2004	447
3	Detection of 91 potential conserved plant microRNAs in Arabidopsis thaliana and Oryza sativa identifies important target genes Proceedings of the National Academy of Sciences ·Éric Bonnet, J. Wuyts, Pierre Rouzé, Yves Van de Peer	2004	368
4	TAPIR, a web server for the prediction of plant microRNA targets, including target mimics Bioinformatics ·Éric Bonnet, Ying He, Kenny Billiau, Yves Van de Peer	2010	271
5	A Tandem Affinity Purification-based Technology Platform to Study the Cell Cycle Interactome in Arabidopsis thaliana Molecular & Cellular Proteomics ·Jelle Van Leene, Hilde Stals, Dominique Eeckhout, Geert Persiau, Eveline Van De Slijke, Gert Van Isterdael, Annelies De Clercq, Éric Bonnet, Kris Laukens, Noor Remmerie, Kim Henderickx, Thomas De Vijlder, Azmi Abdelkrim, Anne Pharazyn, Harry Van Onckelen, Dirk Inzé, Erwin Witters, Geert De Jaeger	2007	176
6	Generic eukaryotic core promoter prediction using structural features of DNA Genome Research ·Thomas Abeel, Yvan Saeys, Éric Bonnet, Pierre Rouzé, Yves Van de Peer	2007	158
7	The small RNA world of plants New Phytologist ·Éric Bonnet, Yves Van de Peer, Pierre Rouzé	2006	107
8	Atlas of Cancer Signalling Network: a systems biology resource for integrative analysis of cancer data with Google Maps Oncogenesis ·Inna Kuperstein, Éric Bonnet, Ha Nam Nguyen, David Cohen, Eric Viara, Luca Grieco, Simon Fourquet, Laurence Calzone, Claudio Russo, Maria Kondratova, Marie Dutreix, Emmanuel Barillot, Andreï Zinovyev	2015	86
9	Integrative Multi-omics Module Network Inference with Lemon-Tree PLoS Computational Biology ·Éric Bonnet, Laurence Calzone, Tom Michoel	2015	78
10	Module Network Inference from a Cancer Gene Expression Data Set Identifies MicroRNA Regulated Modules PLoS ONE ·Éric Bonnet, Marianthi Tatari, Anagha Joshi, Tom Michoel, Kathleen Marchal, Geert Berx, Yves Van de Peer	2010	40
11	Performance comparison of three DNA extraction kits on human whole-exome data from formalin-fixed paraffin-embedded normal and tumor samples PLoS ONE ·Éric Bonnet, Marie-Laure Moutet, Céline Baulard, Delphine Bacq‐Daian, Florian Sandron, Lilia Mesrob, Bertrand Fin, Marc Délepine, Marie-Ange Palomares, Claire Jubin, Hélène Blanché, Vincent Meyer, Anne Boland, Robert Olaso, Jean‐François Deleuze	2018	37
12	BiNoM 2.0, a Cytoscape plugin for accessing and analyzing pathways using standard systems biology formats BMC Systems Biology ·Éric Bonnet, Laurence Calzone, Daniel Rovera, Gautier Stoll, Emmanuel Barillot, Andreï Zinovyev	2013	36
13	Whole-Genome Bisulfite Sequencing for the Analysis of Genome-Wide DNA Methylation and Hydroxymethylation Patterns at Single-Nucleotide Resolution Methods in molecular biology ·Magali Kernaleguen, Christian Daviaud, Yimin Shen, Éric Bonnet, Victor Renault, Jean‐François Deleuze, Florence Mauger, Jörg Tost	2018	31
14	Prediction of a gene regulatory network linked to prostate cancer from gene expression, microRNA and clinical data Bioinformatics ·Éric Bonnet, Tom Michoel, Yves Van de Peer	2010	30
15	ROMA: Representation and Quantification of Module Activity from Target Expression Data Frontiers in Genetics ·Loredana Martignetti, Laurence Calzone, Éric Bonnet, Emmanuel Barillot, Andreï Zinovyev	2016	26
16	Systematic analysis of TruSeq, SMARTer and SMARTer Ultra-Low RNA-seq kits for standard, low and ultra-low quantity samples Scientific Reports ·Marie-Ange Palomares, Cyril Dalmasso, Éric Bonnet, Céline Derbois, Solène Brohard, Christophe Ambroise, Christophe Battail, Jean‐François Deleuze, Robert Olaso	2019	26
17	NaviCell Web Service for network-based data visualization Nucleic Acids Research ·Éric Bonnet, Eric Viara, Inna Kuperstein, Laurence Calzone, David Cohen, Emmanuel Barillot, Andreï Zinovyev	2015	25
18	RA-map: building a state-of-the-art interactive knowledge base for rheumatoid arthritis Database ·Vidisha Singh, George D. Kalliolias, Marek Ostaszewski, Maëva Veyssière, Eleftherios Pilalis, Piotr Gawron, Alexander Mazein, Éric Bonnet, Élisabeth Petit, Anna Niarakis	2020	22
19	Transcription regulatory networks in Caenorhabditis elegans inferred through reverse-engineering of gene expression profiles constitute biological hypotheses for metazoan development Molecular BioSystems ·Vanessa Vermeirssen, Anagha Joshi, Tom Michoel, Éric Bonnet, Tine Casneuf, Yves Van de Peer	2009	19
20	OCSANA: optimal combinations of interventions from network analysis Bioinformatics ·Paola Vera‐Licona, Éric Bonnet, Emmanuel Barillot, Andreï Zinovyev	2013	18

About Éric Bonnet

Éric Bonnet is a scholar working on Aging, Virology, Molecular Biology, Cancer Research and Modeling and Simulation, having authored 33 papers that have together received 2.7k indexed citations. Recurring topics across this work include Bioinformatics and Genomic Networks (15 papers), Microbial Metabolic Engineering and Bioproduction (5 papers), RNA modifications and cancer (5 papers), Gene Regulatory Network Analysis (5 papers), Genomics and Phylogenetic Studies (4 papers), Plant Molecular Biology Research (3 papers), Epigenetics and DNA Methylation (3 papers) and RNA Research and Splicing (3 papers). The work is most often cited by research in Plant Science (1.1k citations), Cancer Research (450 citations), Molecular Biology (1.6k citations), Genetics (403 citations) and Ecological Modeling (54 citations). Éric Bonnet has collaborated with scholars based in France, Belgium and United Kingdom. Frequent co-authors include Yves Van de Peer, Pierre Rouzé, J. Wuyts, Ying He, Kenny Billiau, Laurence Calzone, Tom Michoel, Yvan Saeys, Thomas Abeel and Andreï Zinovyev. Their work appears in journals such as Bioinformatics, Scientific Reports, PLoS ONE, Database and Oncogenesis.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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