David E. Konerding

1.6k total citations · 1 hit paper
10 papers, 729 citations indexed

About

David E. Konerding is a scholar working on Molecular Biology, Computer Networks and Communications and Ecology. According to data from OpenAlex, David E. Konerding has authored 10 papers receiving a total of 729 indexed citations (citations by other indexed papers that have themselves been cited), including 7 papers in Molecular Biology, 3 papers in Computer Networks and Communications and 3 papers in Ecology. Recurrent topics in David E. Konerding's work include DNA and Nucleic Acid Chemistry (4 papers), Bacteriophages and microbial interactions (3 papers) and DNA Repair Mechanisms (2 papers). David E. Konerding is often cited by papers focused on DNA and Nucleic Acid Chemistry (4 papers), Bacteriophages and microbial interactions (3 papers) and DNA Repair Mechanisms (2 papers). David E. Konerding collaborates with scholars based in United States and Canada. David E. Konerding's co-authors include Michael D. Tyka, Frank DiMaio, Patrick Conway, David Baker, Kai Kohlhoff, Vijay S. Pande, Dan Belov, Morgan Lawrenz, Diwakar Shukla and Gregory R. Bowman and has published in prestigious journals such as Biochemistry, Nature Chemistry and Protein Science.

In The Last Decade

David E. Konerding

10 papers receiving 722 citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Relaxation of backbone bond geometry improves protein energy landscape modeling

2013 288 citations Patrick Conway, Michael D. Tyka et al. Protein Science profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
David E. Konerding United States	8	608	107	96	95	84	10	729
Kirill Oxenoid United States	14	853 1.4×	86 0.8×	120 1.3×	187 2.0×	38 0.5×	15	993
Larisa Adamian United States	14	815 1.3×	128 1.2×	105 1.1×	50 0.5×	82 1.0×	21	925
Martin K. Scherer Germany	3	716 1.2×	192 1.8×	46 0.5×	108 1.1×	118 1.4×	3	856
Morgan Lawrenz United States	10	545 0.9×	98 0.9×	91 0.9×	114 1.2×	121 1.4×	12	639
Julia Koehler Leman United States	16	869 1.4×	168 1.6×	61 0.6×	70 0.7×	148 1.8×	25	1.1k
Angelo Felline Italy	13	669 1.1×	77 0.7×	154 1.6×	55 0.6×	158 1.9×	25	741
Sekhar Talluri India	13	410 0.7×	88 0.8×	91 0.9×	49 0.5×	56 0.7×	22	655
Servaas Michielssens Belgium	13	554 0.9×	187 1.7×	41 0.4×	59 0.6×	119 1.4×	20	716
René Staritzbichler Germany	15	639 1.1×	147 1.4×	62 0.6×	71 0.7×	89 1.1×	24	901
Jack Schonbrun United States	8	894 1.5×	270 2.5×	116 1.2×	91 1.0×	56 0.7×	8	1.1k

Countries citing papers authored by David E. Konerding

Since Specialization

Citations

This map shows the geographic impact of David E. Konerding's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by David E. Konerding with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites David E. Konerding more than expected).

Fields of papers citing papers by David E. Konerding

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by David E. Konerding. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by David E. Konerding. The network helps show where David E. Konerding may publish in the future.

Co-authorship network of co-authors of David E. Konerding

This figure shows the co-authorship network connecting the top 25 collaborators of David E. Konerding. A scholar is included among the top collaborators of David E. Konerding based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with David E. Konerding. David E. Konerding is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

Sort: Min cites: Since: Top N: Style:

10 of 10 papers shown

1.

Conway, Patrick, Michael D. Tyka, Frank DiMaio, David E. Konerding, & David Baker. (2013). Relaxation of backbone bond geometry improves protein energy landscape modeling. Protein Science. 23(1). 47–55. 288 indexed citations breakdown →

2.

Kohlhoff, Kai, Diwakar Shukla, Morgan Lawrenz, et al.. (2013). Cloud-based simulations on Google Exacycle reveal ligand modulation of GPCR activation pathways. Nature Chemistry. 6(1). 15–21. 330 indexed citations

3.

Hellerstein, Joseph L., Kai Kohlhoff, & David E. Konerding. (2012). Science in the Cloud: Accelerating Discovery in the 21st Century. IEEE Internet Computing. 16(4). 64–68. 16 indexed citations

4.

Raicu, Ioan, Ian Foster, Carl Kesselman, et al.. (2006). DRP: Dynamic Resource Provisioning. 7 indexed citations

5.

Gunter, Dan, Keith Jackson, David E. Konerding, Jason Lee, & Brian L. Tierney. (2005). Essential Grid Workflow Monitoring Elements. University of North Texas Digital Library (University of North Texas). 39–45. 6 indexed citations

6.

Chandonia, John‐Marc, et al.. (2002). Computational Structural Genomics of a Complete Minimal Organism. Medical Entomology and Zoology. 13. 390–391. 1 indexed citations

7.

Konerding, David E., et al.. (2001). NMR Structure of a Gemcitabine-Substituted Model Okazaki Fragment. Biochemistry. 41(3). 839–846. 20 indexed citations

8.

Konerding, David E., Thomas E. Cheatham, Peter A. Kollman, & Thomas Leroy James. (1999). Restrained molecular dynamics of solvated duplex DNA using the particle mesh Ewald method. Journal of Biomolecular NMR. 13(2). 119–131. 34 indexed citations

9.

Gmeiner, William H., David E. Konerding, & Thomas Leroy James. (1999). Effect of Cytarabine on the NMR Structure of a Model Okazaki Fragment from the SV40 Genome. Biochemistry. 38(4). 1166–1175. 13 indexed citations

10.

Gmeiner, William H., Wei Cui, David E. Konerding, et al.. (1999). Shape-Selective Recognition of a Model Okazaki Fragment By Geometrically-Constrained Bis-Distamycins. Journal of Biomolecular Structure and Dynamics. 17(3). 507–518. 14 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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