David Colognori

4.1k total citations · 1 hit paper
19 papers, 2.9k citations indexed

About

David Colognori is a scholar working on Molecular Biology, Genetics and Cardiology and Cardiovascular Medicine. According to data from OpenAlex, David Colognori has authored 19 papers receiving a total of 2.9k indexed citations (citations by other indexed papers that have themselves been cited), including 19 papers in Molecular Biology, 4 papers in Genetics and 1 paper in Cardiology and Cardiovascular Medicine. Recurrent topics in David Colognori's work include CRISPR and Genetic Engineering (9 papers), RNA Research and Splicing (9 papers) and Genomics and Chromatin Dynamics (8 papers). David Colognori is often cited by papers focused on CRISPR and Genetic Engineering (9 papers), RNA Research and Splicing (9 papers) and Genomics and Chromatin Dynamics (8 papers). David Colognori collaborates with scholars based in United States. David Colognori's co-authors include Jeannie T. Lee, Johnny T. Kung, Hongjae Sunwoo, John E. Froberg, Chen‐Yu Wang, Barry Kesner, Bernhard Payer, Joan A. Steitz, Andrei Alexandrov and Wilhelm Haas and has published in prestigious journals such as Science, Proceedings of the National Academy of Sciences and Nature Communications.

In The Last Decade

David Colognori

19 papers receiving 2.9k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Long Noncoding RNAs: Past, Present, and Future

2013 1.5k citations Johnny T. Kung, David Colognori et al. Genetics profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
David Colognori United States	15	2.4k	1.6k	391	274	125	19	2.9k
Hongjae Sunwoo United States	16	4.0k 1.6×	2.9k 1.9×	437 1.1×	277 1.0×	130 1.0×	17	4.5k
Michal Rabani Israel	11	2.2k 0.9×	1.6k 1.0×	81 0.2×	58 0.2×	138 1.1×	14	2.5k
Claire Francastel France	27	2.4k 1.0×	370 0.2×	499 1.3×	484 1.8×	229 1.8×	55	2.7k
Károly Fátyol Hungary	19	1.6k 0.7×	341 0.2×	247 0.6×	403 1.5×	134 1.1×	32	2.1k
Katherine E. Sloan Germany	27	2.8k 1.1×	781 0.5×	114 0.3×	75 0.3×	75 0.6×	35	3.0k
Olivia S. Rissland United States	18	2.2k 0.9×	592 0.4×	167 0.4×	87 0.3×	98 0.8×	34	2.5k
John LaCava United States	21	2.2k 0.9×	194 0.1×	109 0.3×	481 1.8×	156 1.2×	49	2.5k
Cecile C. de la Cruz United States	10	1.7k 0.7×	324 0.2×	434 1.1×	113 0.4×	215 1.7×	12	2.1k
David Baillat United States	18	1.7k 0.7×	500 0.3×	163 0.4×	90 0.3×	118 0.9×	24	2.0k
Anita L Steptoe Australia	8	1.2k 0.5×	639 0.4×	130 0.3×	114 0.4×	72 0.6×	8	1.5k

Countries citing papers authored by David Colognori

Since Specialization

Citations

This map shows the geographic impact of David Colognori's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by David Colognori with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites David Colognori more than expected).

Fields of papers citing papers by David Colognori

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by David Colognori. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by David Colognori. The network helps show where David Colognori may publish in the future.

Co-authorship network of co-authors of David Colognori

This figure shows the co-authorship network connecting the top 25 collaborators of David Colognori. A scholar is included among the top collaborators of David Colognori based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with David Colognori. David Colognori is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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19 of 19 papers shown

Xia, Chenglong, et al.. (2025). Single-molecule live-cell RNA imaging with CRISPR–Csm. Nature Biotechnology. 43(12). 2023–2030. 14 indexed citations

Shi, Honglue, Kevin Wasko, Marena Trinidad, et al.. (2025). Rapid two-step target capture ensures efficient CRISPR-Cas9-guided genome editing. Molecular Cell. 85(9). 1730–1742.e9. 3 indexed citations

Shi, Honglue, Kevin Wasko, Marena Trinidad, et al.. (2025). BPS2025 - Rapid two-step target capture ensures efficient CRISPR-Cas9-guided genome editing. Biophysical Journal. 124(3). 90a–90a. 1 indexed citations

Colognori, David, Marena Trinidad, & Jennifer A. Doudna. (2023). Precise transcript targeting by CRISPR-Csm complexes. Nature Biotechnology. 41(9). 1256–1264. 42 indexed citations

Lin-Shiao, Enrique, et al.. (2022). Decorating chromatin for enhanced genome editing using CRISPR-Cas9. Proceedings of the National Academy of Sciences. 119(49). e2204259119–e2204259119. 32 indexed citations

Kriz, Andrea J., David Colognori, Hongjae Sunwoo, Behnam Nabet, & Jeannie T. Lee. (2021). Balancing cohesin eviction and retention prevents aberrant chromosomal interactions, Polycomb-mediated repression, and X-inactivation. Molecular Cell. 81(9). 1970–1987.e9. 31 indexed citations

Colognori, David, Hongjae Sunwoo, Danni Wang, Chen‐Yu Wang, & Jeannie T. Lee. (2020). Xist Repeats A and B Account for Two Distinct Phases of X Inactivation Establishment. Developmental Cell. 54(1). 21–32.e5. 38 indexed citations

Jégu, Teddy, Roy Blum, Jesse C. Cochrane, et al.. (2019). Xist RNA antagonizes the SWI/SNF chromatin remodeler BRG1 on the inactive X chromosome. Nature Structural & Molecular Biology. 26(2). 96–109. 46 indexed citations

Wang, Chen‐Yu, David Colognori, Hongjae Sunwoo, Danni Wang, & Jeannie T. Lee. (2019). PRC1 collaborates with SMCHD1 to fold the X-chromosome and spread Xist RNA between chromosome compartments. Nature Communications. 10(1). 2950–2950. 58 indexed citations

10.

Colognori, David, Hongjae Sunwoo, Andrea J. Kriz, Chen‐Yu Wang, & Jeannie T. Lee. (2019). Xist Deletional Analysis Reveals an Interdependency between Xist RNA and Polycomb Complexes for Spreading along the Inactive X. Molecular Cell. 74(1). 101–117.e10. 125 indexed citations

11.

Sunwoo, Hongjae, David Colognori, John E. Froberg, Yesu Jeon, & Jeannie T. Lee. (2017). Repeat E anchors Xist RNA to the inactive X chromosomal compartment through CDKN1A-interacting protein (CIZ1). Proceedings of the National Academy of Sciences. 114(40). 10654–10659. 86 indexed citations

12.

Savol, Andrej, Peggy I. Wang, Yesu Jeon, et al.. (2017). Genome-wide identification of autosomal genes with allelic imbalance of chromatin state. PLoS ONE. 12(8). e0182568–e0182568. 6 indexed citations

13.

Froberg, John E., Chunyao Wei, Hongjae Sunwoo, et al.. (2015). A comprehensive Xist interactome reveals cohesin repulsion and an RNA-directed chromosome conformation. Science. 349(6245). 357 indexed citations

14.

Kung, Johnny T., Barry Kesner, Jee Young An, et al.. (2015). Locus-Specific Targeting to the X Chromosome Revealed by the RNA Interactome of CTCF. Molecular Cell. 57(2). 361–375. 136 indexed citations

15.

Beliveau, Brian J., Alistair N. Boettiger, Mauricio Avendaño, et al.. (2015). Single-molecule super-resolution imaging of chromosomes and in situ haplotype visualization using Oligopaint FISH probes. Nature Communications. 6(1). 7147–7147. 266 indexed citations

16.

Pinter, Stefan F., David Colognori, Brian J. Beliveau, et al.. (2015). Allelic Imbalance Is a Prevalent and Tissue-Specific Feature of the Mouse Transcriptome. Genetics. 200(2). 537–549. 37 indexed citations

17.

Kung, Johnny T., David Colognori, & Jeannie T. Lee. (2013). Long Noncoding RNAs: Past, Present, and Future. Genetics. 193(3). 651–669. 1479 indexed citations breakdown →

18.

Alexandrov, Andrei, David Colognori, Mei-Di Shu, & Joan A. Steitz. (2012). Human spliceosomal protein CWC22 plays a role in coupling splicing to exon junction complex deposition and nonsense-mediated decay. Proceedings of the National Academy of Sciences. 109(52). 21313–21318. 71 indexed citations

19.

Alexandrov, Andrei, David Colognori, & Joan A. Steitz. (2011). Human eIF4AIII interacts with an eIF4G-like partner, NOM1, revealing an evolutionarily conserved function outside the exon junction complex. Genes & Development. 25(10). 1078–1090. 50 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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