Charles David

1.7k total citations · 1 hit paper
14 papers, 995 citations indexed

About

Charles David is a scholar working on Molecular Biology, Cardiology and Cardiovascular Medicine and Atomic and Molecular Physics, and Optics. According to data from OpenAlex, Charles David has authored 14 papers receiving a total of 995 indexed citations (citations by other indexed papers that have themselves been cited), including 9 papers in Molecular Biology, 3 papers in Cardiology and Cardiovascular Medicine and 3 papers in Atomic and Molecular Physics, and Optics. Recurrent topics in Charles David's work include Protein Structure and Dynamics (4 papers), Genomics and Phylogenetic Studies (4 papers) and Force Microscopy Techniques and Applications (3 papers). Charles David is often cited by papers focused on Protein Structure and Dynamics (4 papers), Genomics and Phylogenetic Studies (4 papers) and Force Microscopy Techniques and Applications (3 papers). Charles David collaborates with scholars based in New Zealand, United States and Australia. Charles David's co-authors include Donald J. Jacobs, Christopher M. Yengo, Darshan V. Trivedi, Cecilia Deng, Maren Wellenreuther, Louis Bernatchez, Ross Crowhurst, Andrew Catanach, Ettayapuram Ramaprasad Azhagiya Singam and Grant R. Smith and has published in prestigious journals such as Journal of Molecular Biology, Biophysical Journal and Molecular Ecology.

In The Last Decade

Charles David

13 papers receiving 987 citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Principal Component Analysis: A Method for Determining the Essential Dynamics of Proteins

2013 836 citations Charles David, Donald J. Jacobs Methods in molecular biology profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Charles David New Zealand	7	600	194	93	80	79	14	995
Sebastian Bittrich United States	12	762 1.3×	131 0.7×	79 0.8×	69 0.9×	49 0.6×	23	1.1k
Panagiotis I. Koukos Netherlands	13	907 1.5×	186 1.0×	71 0.8×	151 1.9×	109 1.4×	20	1.3k
Gordon Lemmon United States	12	949 1.6×	165 0.9×	81 0.9×	86 1.1×	63 0.8×	16	1.3k
P. Erbel Switzerland	19	760 1.3×	115 0.6×	110 1.2×	193 2.4×	160 2.0×	29	1.5k
Olga V. Kalinina Germany	17	557 0.9×	98 0.5×	73 0.8×	57 0.7×	55 0.7×	75	850
Michał Łaźniewski Poland	14	537 0.9×	265 1.4×	37 0.4×	66 0.8×	53 0.7×	23	823
Yuan Feng United States	3	712 1.2×	76 0.4×	87 0.9×	65 0.8×	65 0.8×	4	984
Guy Nimrod Israel	9	804 1.3×	72 0.4×	110 1.2×	83 1.0×	71 0.9×	13	1.0k
Geoffrey Masuyer United Kingdom	23	643 1.1×	128 0.7×	103 1.1×	97 1.2×	133 1.7×	51	1.5k
Hee‐Chul Ahn South Korea	20	755 1.3×	59 0.3×	54 0.6×	56 0.7×	86 1.1×	70	1.1k

Countries citing papers authored by Charles David

Since Specialization

Citations

This map shows the geographic impact of Charles David's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Charles David with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Charles David more than expected).

Fields of papers citing papers by Charles David

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Charles David. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Charles David. The network helps show where Charles David may publish in the future.

Co-authorship network of co-authors of Charles David

This figure shows the co-authorship network connecting the top 25 collaborators of Charles David. A scholar is included among the top collaborators of Charles David based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Charles David. Charles David is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

Sort: Min cites: Since: Top N: Style:

14 of 14 papers shown

Hunter, Donald A., Elena Hilario, Charles David, et al.. (2025). Chromosome-level genome assembly and annotation of Petunia hybrida. Scientific Data. 12(1). 1262–1262.

Deslippe, Julie R., et al.. (2024). De-novo assembly of a reference genome for a critically threatened Aotearoa New Zealand tree species, Syzygium maire (Myrtaceae). Tree Genetics & Genomes. 20(5). 1 indexed citations

Frampton, Rebekah A., Louise S. Shuey, Charles David, et al.. (2024). Analysis of Plant and Fungal Transcripts from Resistant and Susceptible Phenotypes of Leptospermum scoparium Challenged by Austropuccinia psidii. Phytopathology. 114(9). 2121–2130. 2 indexed citations

David, Charles, et al.. (2023). Ab initio gene prediction for protein-coding regions. Bioinformatics Advances. 3(1). vbad105–vbad105. 5 indexed citations

David, Charles, et al.. (2021). JEDi: java essential dynamics inspector — a molecular trajectory analysis toolkit. BMC Bioinformatics. 22(1). 226–226. 3 indexed citations

Catanach, Andrew, Ross Crowhurst, Cecilia Deng, et al.. (2019). The genomic pool of standing structural variation outnumbers single nucleotide polymorphism by threefold in the marine teleost Chrysophrys auratus. Molecular Ecology. 28(6). 1210–1223. 58 indexed citations

Frampton, Rebekah A., et al.. (2018). Draft Genome Sequence of a “ Candidatus Liberibacter europaeus” Strain Assembled from Broom Psyllids (Arytainilla spartiophila) from New Zealand. Genome Announcements. 6(20). 7 indexed citations

David, Charles, Ettayapuram Ramaprasad Azhagiya Singam, & Donald J. Jacobs. (2017). JED: a Java Essential Dynamics Program for comparative analysis of protein trajectories. BMC Bioinformatics. 18(1). 271–271. 12 indexed citations

David, Charles & Donald J. Jacobs. (2013). Principal Component Analysis: A Method for Determining the Essential Dynamics of Proteins. Methods in molecular biology. 1084. 193–226. 836 indexed citations breakdown →

10.

Trivedi, Darshan V., Charles David, Donald J. Jacobs, & Christopher M. Yengo. (2012). Switch II Mutants Reveal Coupling between the Nucleotide- and Actin-Binding Regions in Myosin V. Biophysical Journal. 102(11). 2545–2555. 23 indexed citations

11.

David, Charles & Donald J. Jacobs. (2011). Characterizing protein motions from structure. Journal of Molecular Graphics and Modelling. 31. 41–56. 20 indexed citations

12.

Jacobs, Donald J., Darshan V. Trivedi, Charles David, & Christopher M. Yengo. (2011). Kinetics and Thermodynamics of the Rate Limiting Conformational Change in the Myosin V Mechanochemical Cycle. Biophysical Journal. 100(3). 117a–117a. 1 indexed citations

13.

Jacobs, Donald J., Darshan V. Trivedi, Charles David, & Christopher M. Yengo. (2011). Kinetics and Thermodynamics of the Rate-Limiting Conformational Change in the Actomyosin V Mechanochemical Cycle. Journal of Molecular Biology. 407(5). 716–730. 22 indexed citations

14.

David, Charles, et al.. (2005). Hypoosmotic swelling test: a new approach by multi-hypotonic steps.. PubMed. 89(1-4). 219–23. 5 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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