Bhavya Papudeshi

905 total citations
24 papers, 366 citations indexed

About

Bhavya Papudeshi is a scholar working on Ecology, Molecular Biology and Oceanography. According to data from OpenAlex, Bhavya Papudeshi has authored 24 papers receiving a total of 366 indexed citations (citations by other indexed papers that have themselves been cited), including 18 papers in Ecology, 16 papers in Molecular Biology and 3 papers in Oceanography. Recurrent topics in Bhavya Papudeshi's work include Genomics and Phylogenetic Studies (13 papers), Bacteriophages and microbial interactions (11 papers) and Microbial Community Ecology and Physiology (5 papers). Bhavya Papudeshi is often cited by papers focused on Genomics and Phylogenetic Studies (13 papers), Bacteriophages and microbial interactions (11 papers) and Microbial Community Ecology and Physiology (5 papers). Bhavya Papudeshi collaborates with scholars based in Australia, United States and Bermuda. Bhavya Papudeshi's co-authors include Robert A. Edwards, Elizabeth A. Dinsdale, Michael J. Roach, Vijini Mallawaarachchi, Megan M. Morris, John M. Haggerty, George Bouras, Michael P. Doane, Laís Farias Oliveira Lima and Dovi Kacev and has published in prestigious journals such as Nucleic Acids Research, Bioinformatics and Clinical Infectious Diseases.

In The Last Decade

Bhavya Papudeshi

20 papers receiving 359 citations

Peers

Bhavya Papudeshi

ECOLO

OCEAN

IMMUN

David Abad Spain

Angus Angermeyer United States

Elaine Luo United States

Veronica Casas United States

Dawn B. Goldsmith United States

Fred Kibenge Canada

David Ryder United Kingdom

Madeline R. Galac United States

Claire Gougat‐Barbera France

Wesley R. Johnson United States

David Abad Spain

Bhavya Papudeshi

253 ×1.1

ECOLO

186 ×1.0

55 ×1.2

OCEAN

7 ×0.2

IMMUN

19 ×0.6

Citations per year, relative to Bhavya Papudeshi Bhavya Papudeshi (= 1×) peers David Abad

Countries citing papers authored by Bhavya Papudeshi

Since Specialization

Citations

This map shows the geographic impact of Bhavya Papudeshi's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Bhavya Papudeshi with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Bhavya Papudeshi more than expected).

Fields of papers citing papers by Bhavya Papudeshi

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Bhavya Papudeshi. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Bhavya Papudeshi. The network helps show where Bhavya Papudeshi may publish in the future.

Co-authorship network of co-authors of Bhavya Papudeshi

This figure shows the co-authorship network connecting the top 25 collaborators of Bhavya Papudeshi. A scholar is included among the top collaborators of Bhavya Papudeshi based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Bhavya Papudeshi. Bhavya Papudeshi is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

Papudeshi, Bhavya, et al.. (2025). Picobirnavirus: how do you find where it’s hiding?. Critical Reviews in Microbiology. 52(2). 339–349.

Bouras, George, Milot Mirdita, Michael Heinzinger, et al.. (2025). Protein structure-informed bacteriophage genome annotation with Phold. Nucleic Acids Research. 54(1).

Papudeshi, Bhavya, Michael J. Roach, Vijini Mallawaarachchi, et al.. (2024). Sphae: an automated toolkit for predicting phage therapy candidates from sequencing data. Bioinformatics Advances. 5(1). vbaf004–vbaf004. 4 indexed citations

Mallawaarachchi, Vijini, Hansheng Xue, Bhavya Papudeshi, et al.. (2024). Solving genomic puzzles: computational methods for metagenomic binning. Briefings in Bioinformatics. 25(5). 6 indexed citations

Bouras, George, et al.. (2024). Dnaapler: A tool to reorient circular microbialgenomes. The Journal of Open Source Software. 9(93). 5968–5968. 32 indexed citations

Carstens, Alexander Byth, Chayan Roy, Bhavya Papudeshi, et al.. (2024). A novel genus of Pectobacterium bacteriophages display broad host range by targeting several species of Danish soft rot isolates. Virus Research. 347. 199435–199435. 2 indexed citations

Bouras, George, Ghais Houtak, Ryan R. Wick, et al.. (2024). Hybracter: enabling scalable, automated, complete and accurate bacterial genome assemblies. Microbial Genomics. 10(5). 31 indexed citations

Edwards, Robert A., et al.. (2023). Knowing and Naming: Phage Annotation and Nomenclature for Phage Therapy. Clinical Infectious Diseases. 77(Supplement_5). S352–S359. 21 indexed citations

Mallawaarachchi, Vijini, Michael J. Roach, Przemysław Decewicz, et al.. (2023). Phables: from fragmented assemblies to high-quality bacteriophage genomes. Bioinformatics. 39(10). 26 indexed citations

10.

Papudeshi, Bhavya, Douglas B. Rusch, David VanInsberghe, et al.. (2023). Host Association and Spatial Proximity Shape but Do Not Constrain Population Structure in the Mutualistic Symbiont Xenorhabdus bovienii. mBio. 14(3).

11.

Roach, Michael J., et al.. (2023). The human gut virome: composition, colonization, interactions, and impacts on human health. Frontiers in Microbiology. 14. 963173–963173. 35 indexed citations

12.

Papudeshi, Bhavya, et al.. (2023). Stingray epidermal microbiomes are species-specific with local adaptations. Frontiers in Microbiology. 14. 1031711–1031711. 3 indexed citations

13.

Stroeher, Uwe H., et al.. (2022). The StkSR Two-Component System Influences Colistin Resistance in Acinetobacter baumannii. Microorganisms. 10(5). 985–985. 8 indexed citations

14.

Roach, Michael J., N. Tessa Pierce‐Ward, Radosław Suchecki, et al.. (2022). Ten simple rules and a template for creating workflows-as-applications. PLoS Computational Biology. 18(12). e1010705–e1010705. 14 indexed citations

15.

Lima, Laís Farias Oliveira, Bhavya Papudeshi, Megan M. Morris, et al.. (2022). Coral and Seawater Metagenomes Reveal Key Microbial Functions to Coral Health and Ecosystem Functioning Shaped at Reef Scale. Microbial Ecology. 86(1). 392–407. 23 indexed citations

16.

Lima, Laís Farias Oliveira, Bhavya Papudeshi, Megan M. Morris, et al.. (2020). Modeling of the Coral Microbiome: the Influence of Temperature and Microbial Network. mBio. 11(2). 48 indexed citations

17.

Papudeshi, Bhavya, John M. Haggerty, Michael P. Doane, et al.. (2017). Optimizing and evaluating the reconstruction of Metagenome-assembled microbial genomes. BMC Genomics. 18(1). 915–915. 44 indexed citations

18.

Doane, Michael P., John M. Haggerty, Dovi Kacev, Bhavya Papudeshi, & Elizabeth A. Dinsdale. (2017). The skin microbiome of the common thresher shark ( Alopias vulpinus ) has low taxonomic and gene function β‐diversity. Environmental Microbiology Reports. 9(4). 357–373. 38 indexed citations

19.

Ganote, Carrie, et al.. (2017). A Voice for Bioinformatics. IUScholarWorks (Indiana University). 1–5. 2 indexed citations

20.

Morris, Megan M., John M. Haggerty, Bhavya Papudeshi, et al.. (2016). Nearshore Pelagic Microbial Community Abundance Affects Recruitment Success of Giant Kelp, Macrocystis pyrifera. Frontiers in Microbiology. 7. 1800–1800. 19 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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