Begüm D. Topçuoğlu

703 total citations
15 papers, 396 citations indexed

About

Begüm D. Topçuoğlu is a scholar working on Molecular Biology, Environmental Chemistry and Ecology. According to data from OpenAlex, Begüm D. Topçuoğlu has authored 15 papers receiving a total of 396 indexed citations (citations by other indexed papers that have themselves been cited), including 7 papers in Molecular Biology, 5 papers in Environmental Chemistry and 3 papers in Ecology. Recurrent topics in Begüm D. Topçuoğlu's work include Methane Hydrates and Related Phenomena (5 papers), Gut microbiota and health (4 papers) and Microbial Community Ecology and Physiology (3 papers). Begüm D. Topçuoğlu is often cited by papers focused on Methane Hydrates and Related Phenomena (5 papers), Gut microbiota and health (4 papers) and Microbial Community Ecology and Physiology (3 papers). Begüm D. Topçuoğlu collaborates with scholars based in United States, Chile and Germany. Begüm D. Topçuoğlu's co-authors include Patrick D. Schloss, Mack T. Ruffin, Nicholas A. Lesniak, Jenna Wiens, James F. Holden, Lucy C. Stewart, Marc A. Sze, Cem Meydan, Tobias Goldhammer and Julie A. Huber and has published in prestigious journals such as Geochimica et Cosmochimica Acta, Applied and Environmental Microbiology and Frontiers in Microbiology.

In The Last Decade

Begüm D. Topçuoğlu

14 papers receiving 391 citations

Peers

Begüm D. Topçuoğlu

ECOLO

GPC

Jan De Neve Belgium

Bin Xia China

S. V. Bukin Russia

Sarah J. Spencer United States

Donald Pan United States

Lara M. Jochum Germany

Elena Borodinа Russia

Matthew J. Reichlen United States

Eric G. Sakowski United States

Timothy O. Lamberton Australia

Jan De Neve Belgium

Begüm D. Topçuoğlu

160 ×0.8

73 ×0.7

93 ×1.4

ECOLO

34 ×0.7

GPC

4 ×0.1

Citations per year, relative to Begüm D. Topçuoğlu Begüm D. Topçuoğlu (= 1×) peers Jan De Neve

Countries citing papers authored by Begüm D. Topçuoğlu

Since Specialization

Citations

This map shows the geographic impact of Begüm D. Topçuoğlu's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Begüm D. Topçuoğlu with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Begüm D. Topçuoğlu more than expected).

Fields of papers citing papers by Begüm D. Topçuoğlu

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Begüm D. Topçuoğlu. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Begüm D. Topçuoğlu. The network helps show where Begüm D. Topçuoğlu may publish in the future.

Co-authorship network of co-authors of Begüm D. Topçuoğlu

This figure shows the co-authorship network connecting the top 25 collaborators of Begüm D. Topçuoğlu. A scholar is included among the top collaborators of Begüm D. Topçuoğlu based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Begüm D. Topçuoğlu. Begüm D. Topçuoğlu is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

Sort: Min cites: Since: Top N: Style:

15 of 15 papers shown

Armour, Courtney R., et al.. (2023). Machine learning classification by fitting amplicon sequences to existing OTUs. mSphere. 8(5). e0033623–e0033623. 3 indexed citations

Shaffer, Michael, Katharine Best, Xue Liang, et al.. (2023). Very early life microbiome and metabolome correlates with primary vaccination variability in children. mSystems. 8(5). e0066123–e0066123. 11 indexed citations

Armour, Courtney R., Begüm D. Topçuoğlu, Andrea Garretto, & Patrick D. Schloss. (2022). A Goldilocks Principle for the Gut Microbiome: Taxonomic Resolution Matters for Microbiome-Based Classification of Colorectal Cancer. mBio. 13(1). e0316121–e0316121. 15 indexed citations

Fortunato, Caroline S., D. A. Butterfield, B. I. Larson, et al.. (2021). Seafloor Incubation Experiment with Deep-Sea Hydrothermal Vent Fluid Reveals Effect of Pressure and Lag Time on Autotrophic Microbial Communities. Applied and Environmental Microbiology. 87(9). 13 indexed citations

Topçuoğlu, Begüm D., et al.. (2021). mikropml: User-Friendly R Package for Supervised Machine Learning Pipelines. The Journal of Open Source Software. 6(61). 3073–3073. 28 indexed citations

Topçuoğlu, Begüm D.. (2021). HYDROGEN STRESS AND SYNTROPHY OF HYPERTHERMOPHILIC HETEROTROPHS AND METHANOGENS. Scholarworks (University of Massachusetts Amherst).

Hagan, Ada K., Nicholas A. Lesniak, Marcy J. Balunas, et al.. (2020). Ten simple rules to increase computational skills among biologists with Code Clubs. PLoS Computational Biology. 16(8). e1008119–e1008119. 7 indexed citations

Topçuoğlu, Begüm D., Nicholas A. Lesniak, Mack T. Ruffin, Jenna Wiens, & Patrick D. Schloss. (2020). A Framework for Effective Application of Machine Learning to Microbiome-Based Classification Problems. mBio. 11(3). 135 indexed citations

Hagan, Ada K., et al.. (2020). Women Are Underrepresented and Receive Differential Outcomes at ASM Journals: a Six-Year Retrospective Analysis. mBio. 11(6). 27 indexed citations

10.

Nguyen, Tran B., Begüm D. Topçuoğlu, James F. Holden, Douglas E. LaRowe, & Susan Q. Lang. (2019). Lower hydrogen flux leads to larger carbon isotopic fractionation of methane and biomarkers during hydrogenotrophic methanogenesis. Geochimica et Cosmochimica Acta. 271. 212–226. 5 indexed citations

11.

Sze, Marc A., Begüm D. Topçuoğlu, Nicholas A. Lesniak, Mack T. Ruffin, & Patrick D. Schloss. (2019). Fecal Short-Chain Fatty Acids Are Not Predictive of Colonic Tumor Status and Cannot Be Predicted Based on Bacterial Community Structure. mBio. 10(4). 35 indexed citations

12.

Topçuoğlu, Begüm D., Cem Meydan, Tran B. Nguyen, Susan Q. Lang, & James F. Holden. (2019). Growth Kinetics, Carbon Isotope Fractionation, and Gene Expression in the Hyperthermophile Methanocaldococcus jannaschii during Hydrogen-Limited Growth and Interspecies Hydrogen Transfer. Applied and Environmental Microbiology. 85(9). 22 indexed citations

13.

Gruen, Danielle S., David T. Wang, Martin Könneke, et al.. (2018). Experimental investigation on the controls of clumped isotopologue and hydrogen isotope ratios in microbial methane. Geochimica et Cosmochimica Acta. 237. 339–356. 55 indexed citations

14.

Topçuoğlu, Begüm D., Cem Meydan, Roberto Orellana, & James F. Holden. (2017). Formate hydrogenlyase and formate secretion ameliorate H ₂ inhibition in the hyperthermophilic archaeon Thermococcus paralvinellae. Environmental Microbiology. 20(3). 949–957. 10 indexed citations

15.

Topçuoğlu, Begüm D., Lucy C. Stewart, Hilary G. Morrison, et al.. (2016). Hydrogen Limitation and Syntrophic Growth among Natural Assemblages of Thermophilic Methanogens at Deep-sea Hydrothermal Vents. Frontiers in Microbiology. 7. 1240–1240. 30 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

Explore authors with similar magnitude of impact