Bas van Breukelen

2.6k citations

40 papers · 2.0k indexed · h-index 25

Spectroscopy top 1%
- Advanced Proteomics Techniques and Applications 24
- Mass Spectrometry Techniques and Applications 17
Molecular Biology top 5%
- Metabolomics and Mass Spectrometry Studies 8
- Machine Learning in Bioinformatics 5
- RNA and protein synthesis mechanisms 5
- Glycosylation and Glycoproteins Research 3
Oncology top 10%
- Peptidase Inhibition and Analysis 6
Cell Biology top 10%
Microbiology top 10%
Genetics
- Virus-based gene therapy research 3

Co-authors: Albert J. R. Heck Shabaz Mohammed Monique Slijper ‎Berend Snel Martijn W. H. Pinkse Jos Boekhorst Simone Lemeer Maarten Altelaar
Cited by: Spectroscopy Molecular Biology Oncology
Journals: Journal of Proteome Research (10 papers)Molecular & Cellular Proteomics (6 papers)Cell Reports (2 papers)
Partner nations: Netherlands Germany United Kingdom

In The Last Decade

Bas van Breukelen

40 papers receiving 2.0k citations

Peers

Countries citing papers authored by Bas van Breukelen

Since Specialization

Citations

This map shows the geographic impact of Bas van Breukelen's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Bas van Breukelen with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Bas van Breukelen more than expected).

Fields of papers citing papers by Bas van Breukelen

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Bas van Breukelen. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Bas van Breukelen. The network helps show where Bas van Breukelen may publish in the future.

Co-authorship network

The 25 scholars most cited alongside Bas van Breukelen, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with Bas van Breukelen Line = papers co-authored together Bas van Breukelen links everyone, so they are left out of the graph.

All Works

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20 of 20 papers shown

#	Work
1	Proteogenomic Features of the Highly Polymorphic Histidine-rich Glycoprotein Arose Late in Evolution Molecular & Cellular Proteomics ·Xu Jinjiang,Bas van Breukelen,Matti F. Pronker,Karli R. Reiding,Albert J. R. Heck	2023	4
2	Identification of Protein Complexes by Integrating Protein Abundance and Interaction Features Using a Deep Learning Strategy International Journal of Molecular Sciences ·Mohit Kumar,Maarten Altelaar,Bas van Breukelen	2023	3
3	Schistosoma mansoni infection affects the proteome and lipidome of circulating extracellular vesicles in the host Molecular and Biochemical Parasitology ·Rizal Mulya,Renske A. van Gestel,Bas van Breukelen,Rolf T. Urbanus,Jos F. Brouwers,Rienk Nieuwland,Aloysius G. M. Tielens,Jaap J. van Hellemond	2020	11
4	An Augmented Multiple-Protease-Based Human Phosphopeptide Atlas Cell Reports ·Piero Giansanti,Thin Thin Aye,Henk van den Toorn,Mao Peng,Bas van Breukelen,Albert J. R. Heck	2015	83
5	Daily Rhythms in the Cyanobacterium Synechococcus elongatus Probed by High-resolution Mass Spectrometry–based Proteomics Reveals a Small Defined Set of Cyclic Proteins Molecular & Cellular Proteomics ·Ana C. L. Guerreiro,Marco Benevento,Robert Lehmann,Bas van Breukelen,Harm Post,Piero Giansanti,Maarten Altelaar,Ilka M. Axmann,Albert J. R. Heck	2014	66
6	ROCK 1 is a potential combinatorial drug target for BRAF mutant melanoma Molecular Systems Biology ·Marjon A. Smit,Gianluca Maddalo,Kylie T. Greig,文英石,Patrícia A. Possik,Bas van Breukelen,Salvatore Cappadona,Albert J. R. Heck,Maarten Altelaar,Daniel S. Peeper	2014	44
7	Facilitating Protein Disulfide Mapping by a Combination of Pepsin Digestion, Electron Transfer Higher Energy Dissociation (EThcD), and a Dedicated Search Algorithm SlinkS Molecular & Cellular Proteomics ·Fan Liu,Bas van Breukelen,Albert J. R. Heck	2014	67
8	Quantitative and Qualitative Proteome Characteristics Extracted from In-Depth Integrated Genomics and Proteomics Analysis Cell Reports ·Teck Yew Low,Sebastiaan van Heesch,Henk van den Toorn,Piero Giansanti,Alba Cristobal,Pim W. Toonen,Sebastian Schäfer,Norbert Hübner,Bas van Breukelen,Shabaz Mohammed,Edwin Cuppen,Albert J. R. Heck,Victor Guryev	2013	91
9	The PRoteomics IDEntification (PRIDE) Converter 2 Framework: An Improved Suite of Tools to Facilitate Data Submission to the PRIDE Database and the ProteomeXchange Consortium Molecular & Cellular Proteomics ·Richard G. Côté,Johannes Griss,José A. Dianes,Rui Wang,James C. Wright,Henk W. P. van den Toorn,Bas van Breukelen,Albert J. R. Heck,Niels Hulstaert,Lennart Martens,Florian Reisinger,Attila Csordás,David Ovelleiro,Yasset Pérez‐Riverol,Harald Barsnes,Henning Hermjakob,Juan Antonio Vizcaíno	2012	93
10	Current challenges in software solutions for mass spectrometry-based quantitative proteomics Amino Acids ·Salvatore Cappadona,Peter R. Baker,Pedro R. Cutillas,Albert J. R. Heck,Bas van Breukelen	2012	82
11	High confidence and sensitivity four-dimensional fractionation for human plasma proteome analysis Amino Acids ·Renato Millioni,Serena Tolin,Gian Paolo Fadini,Marco Falda,Bas van Breukelen,Paolo Tessari,Giorgio Arrigoni	2012	9
12	Perturbation of the yeast N-acetyltransferase NatB induces elevation of protein phosphorylation levels BMC Genomics ·Andreas O. Helbig,Sara Rosati,W.W.M. Pim Pijnappel,Bas van Breukelen,孟齐霞,Shabaz Mohammed,Monique Slijper,Albert J. R. Heck	2010	73
13	Profiling of N-Acetylated Protein Termini Provides In-depth Insights into the N-terminal Nature of the Proteome Molecular & Cellular Proteomics ·Andreas O. Helbig,Sharon Gauci,Reinout Raijmakers,Bas van Breukelen,Monique Slijper,Shabaz Mohammed,Albert J. R. Heck	2010	103
14	LysNDeNovo: An algorithm enabling de novo sequencing of Lys‐N generated peptides fragmented by electron transfer dissociation PROTEOMICS ·Bas van Breukelen,Yasushi Fukazawa,Mădălina M. Drugan,Nadia Taouatas,Shabaz Mohammed,Albert J. R. Heck	2010	8
15	RockerBox: Analysis and Filtering of Massive Proteomics Search Results Journal of Proteome Research ·Henk W. P. van den Toorn,Javier Muñoz,Shabaz Mohammed,Reinout Raijmakers,Albert J. R. Heck,Bas van Breukelen	2010	28
16	In-depth Qualitative and Quantitative Profiling of Tyrosine Phosphorylation Using a Combination of Phosphopeptide Immunoaffinity Purification and Stable Isotope Dimethyl Labeling Molecular & Cellular Proteomics ·Paul J. Boersema,紳一大石,Vanessa Ding,Simone Lemeer,Bas van Breukelen,Robin Philp,Jos Boekhorst,‎Berend Snel,Jeroen den Hertog,Andre Choo,Albert J. R. Heck	2009	135
17	Comparative phosphoproteomics reveals evolutionary and functional conservation of phosphorylation across eukaryotes Genome biology ·Jos Boekhorst,Bas van Breukelen,Albert J. R. Heck,‎Berend Snel	2008	73
18	A versatile peptide pI calculator for phosphorylated and N‐terminal acetylated peptides experimentally tested using peptide isoelectric focusing PROTEOMICS ·Sharon Gauci,Bas van Breukelen,Simone Lemeer,Jeroen Krijgsveld,Albert J. R. Heck	2008	46
19	Resolving stoichiometries and oligomeric states of glutamate synthase protein complexes with curve fitting and simulation of electrospray mass spectra Rapid Communications in Mass Spectrometry ·Bas van Breukelen,Arjan Barendregt,Albert J. R. Heck,Robert H. H. van den Heuvel	2006	45
20	The Formation of a Flexible DNA-binding Protein Chain Is Required for Efficient DNA Unwinding and Adenovirus DNA Chain Elongation Journal of Biological Chemistry ·Bas van Breukelen,Panagiotis Kanellopoulos,Paul A. Tucker,Peter C. van der Vliet	2000	16

About Bas van Breukelen

Bas van Breukelen is a scholar working on Spectroscopy, Aging, Molecular Biology, Oncology and Genetics, having authored 40 papers that have together received 2.0k indexed citations. Recurring topics across this work include Advanced Proteomics Techniques and Applications (24 papers), Mass Spectrometry Techniques and Applications (17 papers), Metabolomics and Mass Spectrometry Studies (8 papers), Peptidase Inhibition and Analysis (6 papers), Machine Learning in Bioinformatics (5 papers), RNA and protein synthesis mechanisms (5 papers), Glycosylation and Glycoproteins Research (3 papers) and Virus-based gene therapy research (3 papers). The work is most often cited by research in Spectroscopy (943 citations), Molecular Biology (1.6k citations), Oncology (267 citations), Cell Biology (128 citations) and Microbiology (36 citations). Bas van Breukelen has collaborated with scholars based in Netherlands, Germany and United Kingdom. Frequent co-authors include Albert J. R. Heck, Shabaz Mohammed, Monique Slijper, ‎Berend Snel, Martijn W. H. Pinkse, Jos Boekhorst, Simone Lemeer, Maarten Altelaar, Arjen Scholten and Joost W. Gouw. Their work appears in journals such as Journal of Proteome Research, Molecular & Cellular Proteomics, Cell Reports, Bioinformatics and PROTEOMICS.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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