Bas E. Dutilh

25.2k citations

145 papers · 8.6k indexed · 8 hit papers · h-index 45

Impact in

Ecology top 0.2%
- Bacteriophages and microbial interactions
- Microbial Community Ecology and Physiology
Endocrinology top 1%

Papers in ⓘ

Ecology 86
- Bacteriophages and microbial interactions 51
- Microbial Community Ecology and Physiology 44
Endocrinology 12

Co-authors: Annemarie Boleij (13 shared papers)Harold Tjalsma (7 shared papers)Julian R. Marchesi (3 shared papers)Robert A. Edwards (21 shared papers)John L. Mokili (4 shared papers)Martijn A. Huynen (24 shared papers)Felipe H. Coutinho (13 shared papers)Forest Rohwer (4 shared papers)
Journals: PLoS ONE (10 papers)Nature Communications (8 papers)BMC Genomics (8 papers)Viruses (7 papers)Bioinformatics (7 papers)
Partner nations: Netherlands United States Brazil

In The Last Decade

Bas E. Dutilh

142 papers receiving 8.5k citations

Hit Papers

8 papers align trajectories log scale

iPHoP: An integrated machine learning framework to maximize host prediction for metagenome-derived viruses of archaea and bacteria 2023 · 182 citations

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if any of the following hold:

it has ≥500 total citations;
it reaches ≥1.5× the top-1% citation threshold for papers in the same subfield and year (the threshold is the minimum needed to enter the top 1%, not the average within it);
it reaches the top citation threshold in at least one of its specific research topics.

2023 PLoS Biology
2019 Genome biology
2018 Trends in Microbiology
2018 Nature Reviews Microbiology
2016 Nature Communications
2014 Nature Communications
2012 Nature Reviews Microbiology
2012 Current Opinion in Virology

Peers

Countries citing papers authored by Bas E. Dutilh

Since Specialization

Citations

This map shows the geographic impact of Bas E. Dutilh's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Bas E. Dutilh with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Bas E. Dutilh more than expected).

Fields of papers citing papers by Bas E. Dutilh

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Bas E. Dutilh. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Bas E. Dutilh. The network helps show where Bas E. Dutilh may publish in the future.

Co-authors

The 25 scholars most cited alongside Bas E. Dutilh, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with Bas E. Dutilh Line = papers co-authored together Bas E. Dutilh links everyone, so they are left out of the graph.

All Works

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20 of 20 papers shown

Showing the 20 most-cited of 145 papers — load more, or switch the sort, to bring in the rest.

#	Work
1	A bacterial driver–passenger model for colorectal cancer: beyond the usual suspects Nature Reviews Microbiology ·Harold Tjalsma, Annemarie Boleij, Julian R. Marchesi, Bas E. Dutilh Hit paper breakdown →	2012	682
2	A highly abundant bacteriophage discovered in the unknown sequences of human faecal metagenomes Nature Communications ·Bas E. Dutilh, Noriko A. Cassman, Katelyn McNair, Savannah E. Sanchez, Amaro E. Trindade‐Silva, Lance Boling, Jeremy J. Barr, Daan R. Speth, Victor Seguritan, Ramy K. Aziz, Ben Felts, Elizabeth A. Dinsdale, John L. Mokili, Robert A. Edwards Hit paper breakdown →	2014	567
3	Towards the Human Colorectal Cancer Microbiome PLoS ONE ·Julian R. Marchesi, Bas E. Dutilh, Neil Hall, Wilbert H.M. Peters, Rian Roelofs, Annemarie Boleij, Harold Tjalsma	2011	426
4	Metagenomics and future perspectives in virus discovery Current Opinion in Virology ·John L. Mokili, Forest Rohwer, Bas E. Dutilh Hit paper breakdown →	2012	419
5	Targeting mechanisms of tailed bacteriophages Nature Reviews Microbiology ·Franklin L. Nóbrega, Marnix Vlot, Patrick A. de Jonge, Lisa L. Dreesens, Hubertus J. E. Beaumont, Rob Lavigne, Bas E. Dutilh, Stan J. J. Brouns Hit paper breakdown →	2018	404
6	Genome-based microbial ecology of anammox granules in a full-scale wastewater treatment system Nature Communications ·Daan R. Speth, Michiel H. in ‘t Zandt, Simon Guerrero-Cruz, Bas E. Dutilh, Mike S. M. Jetten Hit paper breakdown →	2016	392
7	Robust taxonomic classification of uncharted microbial sequences and bins with CAT and BAT Genome biology ·F. A. Bastiaan von Meijenfeldt, Ksenia Arkhipova, Diego D. Cambuy, Felipe H. Coutinho, Bas E. Dutilh Hit paper breakdown →	2019	327
8	Computational approaches to predict bacteriophage–host relationships FEMS Microbiology Reviews ·Robert A. Edwards, Katelyn McNair, Karoline Faust, Jeroen Raes, Bas E. Dutilh	2015	309
9	Molecular and Evolutionary Determinants of Bacteriophage Host Range Trends in Microbiology ·Patrick A. de Jonge, Franklin L. Nóbrega, Stan J. J. Brouns, Bas E. Dutilh Hit paper breakdown →	2018	303
10	Pyrosequencing of 16S rRNA gene amplicons to study the microbiota in the gastrointestinal tract of carp (Cyprinus carpio L.) AMB Express ·Maartje A. H. J. van Kessel, Bas E. Dutilh, Kornelia Neveling, Michael Kwint, Joris A. Veltman, Gert Flik, Mike S. M. Jetten, Peter H.M. Klaren, Huub J. M. Op den Camp	2011	204
11	iPHoP: An integrated machine learning framework to maximize host prediction for metagenome-derived viruses of archaea and bacteria PLoS Biology ·Simon Roux, Antônio Pedro Camargo, Felipe H. Coutinho, Shareef M. Dabdoub, Bas E. Dutilh, Stephen Nayfach, Andrew Tritt Hit paper breakdown →	2023	182
12	Marine viruses discovered via metagenomics shed light on viral strategies throughout the oceans Nature Communications ·Felipe H. Coutinho, Cynthia B. Silveira, Gustavo Bueno Gregoracci, Cristiane C. Thompson, Robert A. Edwards, Corina P. D. Brussaard, Bas E. Dutilh, Fabiano L. Thompson	2017	177
13	Discovery of a hapE Mutation That Causes Azole Resistance in Aspergillus fumigatus through Whole Genome Sequencing and Sexual Crossing PLoS ONE ·Simone M. T. Camps, Bas E. Dutilh, Maiken Cavling Arendrup, Antonius J. M. M. Rijs, Eveline Snelders, Martijn A. Huynen, Paul E. Verweij, Willem J. G. Melchers	2012	155
14	GENOME TREES AND THE NATURE OF GENOME EVOLUTION Annual Review of Microbiology ·‎Berend Snel, Martijn A. Huynen, Bas E. Dutilh	2005	130
15	Horizontal gene transfer from Bacteria to rumen Ciliates indicates adaptation to their anaerobic, carbohydrates-rich environment BMC Genomics ·Guénola Ricard, Neil McEwan, Bas E. Dutilh, Jean‐Pierre Jouany, Didier Machebœuf, Makoto Mitsumori, Freda M. McIntosh, Tadeusz Michałowski, Takafumi Nagamine, Nancy Nelson, C. J. Newbold, E. Nsabimana, A. Takénaka, Nadine A. Thomas, Kazunari Ushida, Johannes H. P. Hackstein, Martijn A. Huynen	2006	125
16	SUPER-FOCUS: a tool for agile functional analysis of shotgun metagenomic data Bioinformatics ·Genivaldo Gueiros Z. Silva, Kevin T. Green, Bas E. Dutilh, Robert A. Edwards	2015	116
17	Pharmacomicrobiomics: The Impact of Human Microbiome Variations on Systems Pharmacology and Personalized Therapeutics OMICS A Journal of Integrative Biology ·Marwa T. ElRakaiby, Bas E. Dutilh, Mariam R. Rizkallah, Annemarie Boleij, Jason N. Cole, Ramy K. Aziz	2014	112
18	From cultured to uncultured genome sequences: metagenomics and modeling microbial ecosystems Cellular and Molecular Life Sciences ·Daniel Garza, Bas E. Dutilh	2015	103
19	A Phage Protein Aids Bacterial Symbionts in Eukaryote Immune Evasion Cell Host & Microbe ·Martin T. Jahn, Ksenia Arkhipova, Sebastian M. Markert, Christian Stigloher, Tim Lachnit, Lucía Pita, Anne Kupczok, Marta Ribes, Stephanie T. Stengel, Philip Rosenstiel, Bas E. Dutilh, Ute Hentschel	2019	92
20	Ecogenomics and Taxonomy of Cyanobacteria Phylum Frontiers in Microbiology ·Juline M. Walter, Felipe H. Coutinho, Bas E. Dutilh, Jean Swings, Fabiano L. Thompson, Cristiane C. Thompson	2017	87

About Bas E. Dutilh

Bas E. Dutilh is a scholar working on Ecology, Endocrinology, Molecular Biology, Infectious Diseases and Plant Science, having authored 145 papers that have together received 8.6k indexed citations. Recurring topics across this work include Genomics and Phylogenetic Studies (71 papers), Bacteriophages and microbial interactions (51 papers), Microbial Community Ecology and Physiology (44 papers), Gut microbiota and health (23 papers), Plant Virus Research Studies (18 papers), Aquaculture disease management and microbiota (8 papers), Probiotics and Fermented Foods (8 papers) and RNA and protein synthesis mechanisms (7 papers). The work is most often cited by research in Ecology (4.0k citations), Endocrinology (490 citations), Microbiology (485 citations), Infectious Diseases (1.3k citations) and Molecular Biology (4.5k citations). Bas E. Dutilh has collaborated with scholars based in Netherlands, United States and Brazil. Frequent co-authors include Annemarie Boleij, Harold Tjalsma, Julian R. Marchesi, Robert A. Edwards, John L. Mokili, Martijn A. Huynen, Felipe H. Coutinho, Forest Rohwer, Franklin L. Nóbrega and Stan J. J. Brouns. Their work appears in journals such as PLoS ONE, Nature Communications, BMC Genomics, Viruses and Bioinformatics.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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