Anne Lopes

847 total citations
18 papers, 567 citations indexed

About

Anne Lopes is a scholar working on Molecular Biology, Genetics and Materials Chemistry. According to data from OpenAlex, Anne Lopes has authored 18 papers receiving a total of 567 indexed citations (citations by other indexed papers that have themselves been cited), including 17 papers in Molecular Biology, 4 papers in Genetics and 4 papers in Materials Chemistry. Recurrent topics in Anne Lopes's work include Protein Structure and Dynamics (10 papers), RNA and protein synthesis mechanisms (9 papers) and Genomics and Phylogenetic Studies (4 papers). Anne Lopes is often cited by papers focused on Protein Structure and Dynamics (10 papers), RNA and protein synthesis mechanisms (9 papers) and Genomics and Phylogenetic Studies (4 papers). Anne Lopes collaborates with scholars based in France, Cyprus and Israel. Anne Lopes's co-authors include Raphaël Guérois, Marie‐Agnès Petit, Sophie Zinn‐Justin, Thomas Simonson, Paulo Tavares, Guilhem Faure, Marcel Schmidt am Busch, Christine M. Bathelt, Georgios Archontis and Sophie Sacquin‐Mora and has published in prestigious journals such as Nucleic Acids Research, Journal of Molecular Biology and Genome Research.

In The Last Decade

Anne Lopes

18 papers receiving 564 citations

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Anne Lopes France	13	459	215	97	78	68	18	567
Adeline Goulet France	17	641 1.4×	328 1.5×	33 0.3×	105 1.3×	84 1.2×	37	860
Claudia Schaffner-Barbero Spain	6	302 0.7×	159 0.7×	41 0.4×	219 2.8×	28 0.4×	8	484
Gautier Robin Australia	12	541 1.2×	122 0.6×	99 1.0×	76 1.0×	33 0.5×	25	786
Julie L. Chaney United States	9	539 1.2×	47 0.2×	82 0.8×	113 1.4×	27 0.4×	11	649
Mindaugas Zaremba Lithuania	13	524 1.1×	179 0.8×	41 0.4×	175 2.2×	84 1.2×	36	673
Guillaume Postic France	12	360 0.8×	36 0.2×	75 0.8×	79 1.0×	26 0.4×	27	436
Bertrand Beckert Germany	19	896 2.0×	175 0.8×	30 0.3×	240 3.1×	33 0.5×	32	1.0k
Charlotte Helgstrand Denmark	16	508 1.1×	222 1.0×	54 0.6×	68 0.9×	131 1.9×	21	781
Pohl Milón Italy	16	1.0k 2.2×	155 0.7×	64 0.7×	456 5.8×	24 0.4×	34	1.1k
Adam S. Olia United States	14	508 1.1×	489 2.3×	49 0.5×	142 1.8×	100 1.5×	24	750

Countries citing papers authored by Anne Lopes

Since Specialization

Citations

This map shows the geographic impact of Anne Lopes's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Anne Lopes with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Anne Lopes more than expected).

Fields of papers citing papers by Anne Lopes

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Anne Lopes. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Anne Lopes. The network helps show where Anne Lopes may publish in the future.

Co-authorship network of co-authors of Anne Lopes

This figure shows the co-authorship network connecting the top 25 collaborators of Anne Lopes. A scholar is included among the top collaborators of Anne Lopes based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Anne Lopes. Anne Lopes is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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18 of 18 papers shown

Lopes, Anne, et al.. (2024). De N ovo Emerged Gene Se arch in Eukaryotes with DENSE. Genome Biology and Evolution. 16(8). 6 indexed citations

Vogt, Nicolas, Isabelle Hatin, David Cornu, et al.. (2024). Pervasive translation of Xrn1-sensitive unstable long non-coding RNAs in yeast. RNA. 30(6). rna.079903.123–rna.079903.123. 8 indexed citations

Cornu, David, Nicolas Chevrollier, Sandra Blanchet, et al.. (2024). The ribosome profiling landscape of yeast reveals a high diversity in pervasive translation. Genome biology. 25(1). 268–268. 4 indexed citations

Chevrollier, Nicolas, et al.. (2022). Exploring the Peptide Potential of Genomes. Methods in molecular biology. 2405. 63–82. 1 indexed citations

Chevrollier, Nicolas, et al.. (2022). SURFMAP: A Software for Mapping in Two Dimensions Protein Surface Features. Journal of Chemical Information and Modeling. 62(7). 1595–1601. 19 indexed citations

Callebaut, Isabelle, Jean‐Christophe Gelly, Isabelle Hatin, et al.. (2021). Intergenic ORFs as elementary structural modules of de novo gene birth and protein evolution. Genome Research. 31(12). 2303–2315. 24 indexed citations

Alpha‐Bazin, Béatrice, Aurore Gorlas, Arnaud Lagorce, et al.. (2020). Lysine-specific acetylated proteome from the archaeon Thermococcus gammatolerans reveals the presence of acetylated histones. Journal of Proteomics. 232. 104044–104044. 17 indexed citations

Sacquin‐Mora, Sophie, et al.. (2020). Protein Interaction Energy Landscapes are Shaped by Functional and also Non-functional Partners. Journal of Molecular Biology. 432(4). 1183–1198. 9 indexed citations

Lopes, Anne, Paulo Tavares, Marie‐Agnès Petit, Raphaël Guérois, & Sophie Zinn‐Justin. (2014). Automated classification of tailed bacteriophages according to their neck organization. BMC Genomics. 15(1). 1027–1027. 151 indexed citations

10.

Lopes, Anne, et al.. (2013). Protein-Protein Interactions in a Crowded Environment: An Analysis via Cross-Docking Simulations and Evolutionary Information. PLoS Computational Biology. 9(12). e1003369–e1003369. 37 indexed citations

11.

Simonson, Thomas, Thomas Gaillard, Marcel Schmidt am Busch, et al.. (2013). Computational protein design: The proteus software and selected applications. Journal of Computational Chemistry. 34(28). 2472–2484. 34 indexed citations

12.

Marsin, Stéphanie, et al.. (2010). Genetic dissection of Helicobacter pylori AddAB role in homologous recombination. FEMS Microbiology Letters. 311(1). 44–50. 15 indexed citations

13.

Lopes, Anne, et al.. (2010). Detection of novel recombinases in bacteriophage genomes unveils Rad52, Rad51 and Gp2.5 remote homologs. Nucleic Acids Research. 38(12). 3952–3962. 98 indexed citations

14.

Lopes, Anne, Marcel Schmidt am Busch, & Thomas Simonson. (2009). Computational design of protein–ligand binding: Modifying the specificity of asparaginyl‐tRNA synthetase. Journal of Computational Chemistry. 31(6). 1273–1286. 14 indexed citations

15.

Busch, Marcel Schmidt am, et al.. (2008). Testing the Coulomb/Accessible Surface Area solvent model for protein stability, ligand binding, and protein design. BMC Bioinformatics. 9(1). 148–148. 27 indexed citations

16.

Busch, Marcel Schmidt am, et al.. (2007). Computational protein design: Software implementation, parameter optimization, and performance of a simple model. Journal of Computational Chemistry. 29(7). 1092–1102. 23 indexed citations

17.

Lopes, Anne, et al.. (2007). Computational sidechain placement and protein mutagenesis with implicit solvent models. Proteins Structure Function and Bioinformatics. 67(4). 853–867. 54 indexed citations

18.

Papandreou, Nikolaos, Igor N. Berezovsky, Anne Lopes, Elias Eliopoulos, & Jacques Chomilier. (2004). Universal positions in globular proteins. European Journal of Biochemistry. 271(23-24). 4762–4768. 26 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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