Aleksey Y. Ogurtsov

1.7k total citations
42 papers, 1.1k citations indexed

About

Aleksey Y. Ogurtsov is a scholar working on Molecular Biology, Spectroscopy and Clinical Biochemistry. According to data from OpenAlex, Aleksey Y. Ogurtsov has authored 42 papers receiving a total of 1.1k indexed citations (citations by other indexed papers that have themselves been cited), including 37 papers in Molecular Biology, 12 papers in Spectroscopy and 6 papers in Clinical Biochemistry. Recurrent topics in Aleksey Y. Ogurtsov's work include RNA and protein synthesis mechanisms (17 papers), Genomics and Phylogenetic Studies (11 papers) and Advanced Proteomics Techniques and Applications (10 papers). Aleksey Y. Ogurtsov is often cited by papers focused on RNA and protein synthesis mechanisms (17 papers), Genomics and Phylogenetic Studies (11 papers) and Advanced Proteomics Techniques and Applications (10 papers). Aleksey Y. Ogurtsov collaborates with scholars based in United States, Russia and Sweden. Aleksey Y. Ogurtsov's co-authors include Svetlana A. Shabalina, Alexey S. Kondrashov, Eugene V. Koonin, Yi‐Kuo Yu, Gelio Alves, Fyodor A. Kondrashov, Guilhem Faure, Shamil Sunyaev, O. V. Matveeva and Igor B. Rogozin and has published in prestigious journals such as Nature, Nucleic Acids Research and Bioinformatics.

In The Last Decade

Aleksey Y. Ogurtsov

41 papers receiving 1.1k citations

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name h Career Trend Papers Cites
Aleksey Y. Ogurtsov United States 20 924 173 125 101 87 42 1.1k
Judy Clark United States 12 614 0.7× 97 0.6× 302 2.4× 28 0.3× 37 0.4× 31 1.1k
Pau-Miau Yuan United States 12 776 0.8× 206 1.2× 96 0.8× 45 0.4× 85 1.0× 18 1.3k
Oleg I. Klychnikov Netherlands 14 483 0.5× 79 0.5× 107 0.9× 46 0.5× 79 0.9× 29 796
E. Jung Germany 12 535 0.6× 60 0.3× 159 1.3× 19 0.2× 39 0.4× 22 962
Peter G. Hains Australia 20 953 1.0× 249 1.4× 192 1.5× 29 0.3× 133 1.5× 58 1.4k
Dominique Rasoloson United States 12 1.4k 1.5× 200 1.2× 47 0.4× 52 0.5× 114 1.3× 15 1.7k
Daniel Chelsky United States 20 1.1k 1.2× 193 1.1× 93 0.7× 39 0.4× 92 1.1× 36 1.5k
Sadhna Phanse Canada 18 947 1.0× 212 1.2× 92 0.7× 28 0.3× 38 0.4× 45 1.2k
Tobias von der Haar United Kingdom 27 2.2k 2.4× 198 1.1× 46 0.4× 84 0.8× 150 1.7× 57 2.6k
Odd Nygârd Sweden 23 1.4k 1.5× 138 0.8× 66 0.5× 55 0.5× 95 1.1× 67 1.6k

Countries citing papers authored by Aleksey Y. Ogurtsov

Since Specialization
Citations

This map shows the geographic impact of Aleksey Y. Ogurtsov's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Aleksey Y. Ogurtsov with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Aleksey Y. Ogurtsov more than expected).

Fields of papers citing papers by Aleksey Y. Ogurtsov

Since Specialization
Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Aleksey Y. Ogurtsov. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Aleksey Y. Ogurtsov. The network helps show where Aleksey Y. Ogurtsov may publish in the future.

Co-authorship network of co-authors of Aleksey Y. Ogurtsov

This figure shows the co-authorship network connecting the top 25 collaborators of Aleksey Y. Ogurtsov. A scholar is included among the top collaborators of Aleksey Y. Ogurtsov based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Aleksey Y. Ogurtsov. Aleksey Y. Ogurtsov is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

20 of 20 papers shown
1.
Alves, Gelio, Aleksey Y. Ogurtsov, & Yi‐Kuo Yu. (2025). Biological Function Assignment across Taxonomic Levels in Mass-Spectrometry-Based Metaproteomics via a Modified Expectation Maximization Algorithm. Journal of Proteome Research. 24(8). 3818–3832.
2.
Alves, Gelio, Aleksey Y. Ogurtsov, Harry S. Porterfield, et al.. (2024). Multiplexing the Identification of Microorganisms via Tandem Mass Tag Labeling Augmented by Interference Removal through a Novel Modification of the Expectation Maximization Algorithm. Journal of the American Society for Mass Spectrometry. 35(6). 1138–1155. 2 indexed citations
3.
Ogurtsov, Aleksey Y., Gelio Alves, Björn Andersson, et al.. (2024). MiCId GUI: The Graphical User Interface for MiCId, a Fast Microorganism Classification and Identification Workflow with Accurate Statistics and High Recall. Journal of Computational Biology. 31(2). 175–178. 2 indexed citations
4.
Hamaneh, Mehdi Bagheri, et al.. (2024). Systematic Assessment of Deep Learning-Based Predictors of Fragmentation Intensity Profiles. Journal of Proteome Research. 23(6). 1983–1999. 1 indexed citations
5.
Alves, Gelio, Aleksey Y. Ogurtsov, Roger Karlsson, et al.. (2022). Identification of Antibiotic Resistance Proteins via MiCId’s Augmented Workflow. A Mass Spectrometry-Based Proteomics Approach. Journal of the American Society for Mass Spectrometry. 33(6). 917–931. 9 indexed citations
6.
Savitskaya, Ekaterina, Maxim Panov, Aleksey Y. Ogurtsov, et al.. (2021). Uncertainty-aware and interpretable evaluation of Cas9–gRNA and Cas12a–gRNA specificity for fully matched and partially mismatched targets with Deep Kernel Learning. Nucleic Acids Research. 50(2). e11–e11. 11 indexed citations
7.
Kim, Jung‐Hyun, Vladimir N. Noskov, Aleksey Y. Ogurtsov, et al.. (2021). The genomic structure of a human chromosome 22 nucleolar organizer region determined by TAR cloning. Scientific Reports. 11(1). 2997–2997. 12 indexed citations
8.
Kondori, Nahid, Francisco Salvà‐Serra, Daniel Jaén‐Luchoro, et al.. (2021). Mass Spectrometry Proteotyping-Based Detection and Identification of Staphylococcus aureus, Escherichia coli, and Candida albicans in Blood. Frontiers in Cellular and Infection Microbiology. 11. 634215–634215. 17 indexed citations
9.
Matveeva, O. V., et al.. (2018). Sequence characteristics define trade-offs between on-target and genome-wide off-target hybridization of oligoprobes. PLoS ONE. 13(6). e0199162–e0199162. 4 indexed citations
10.
Faure, Guilhem, Aleksey Y. Ogurtsov, Svetlana A. Shabalina, & Eugene V. Koonin. (2017). Adaptation of mRNA structure to control protein folding. RNA Biology. 14(12). 1649–1654. 21 indexed citations
11.
Alves, Gelio, Aleksey Y. Ogurtsov, & Yi‐Kuo Yu. (2013). Molecular Isotopic Distribution Analysis (MIDAs) with Adjustable Mass Accuracy. Journal of the American Society for Mass Spectrometry. 25(1). 57–70. 12 indexed citations
12.
Alves, Gelio, Aleksey Y. Ogurtsov, & Yi‐Kuo Yu. (2010). Assigning statistical significance to proteotypic peptides via database searches. Journal of Proteomics. 74(2). 199–211. 8 indexed citations
13.
Alves, Gelio, Aleksey Y. Ogurtsov, & Yi‐Kuo Yu. (2010). RAId_aPS: MS/MS Analysis with Multiple Scoring Functions and Spectrum-Specific Statistics. PLoS ONE. 5(11). e15438–e15438. 16 indexed citations
14.
Shabalina, Svetlana A., Dmitri V. Zaykin, Pavel Gris, et al.. (2008). Expansion of the human μ-opioid receptor gene architecture: novel functional variants. Human Molecular Genetics. 18(6). 1037–1051. 126 indexed citations
15.
Ogurtsov, Aleksey Y., Leonardo Mariño‐Ramírez, Gibbes R. Johnson, et al.. (2008). Expression Patterns of Protein Kinases Correlate with Gene Architecture and Evolutionary Rates. PLoS ONE. 3(10). e3599–e3599. 19 indexed citations
16.
Matveeva, O. V., Yury D. Nechipurenko, Leonardo Rossi, et al.. (2007). Comparison of approaches for rational siRNA design leading to a new efficient and transparent method. Nucleic Acids Research. 35(8). e63–e63. 116 indexed citations
17.
Kondrashov, Fyodor A., Aleksey Y. Ogurtsov, & Alexey S. Kondrashov. (2005). Selection in favor of nucleotides G and C diversifies evolution rates and levels of polymorphism at mammalian synonymous sites. Journal of Theoretical Biology. 240(4). 616–626. 51 indexed citations
18.
Ogurtsov, Aleksey Y., Shamil Sunyaev, & Alexey S. Kondrashov. (2004). Indel-Based Evolutionary Distance and Mouse–Human Divergence. Genome Research. 14(8). 1610–1616. 42 indexed citations
19.
Ogurtsov, Aleksey Y., Mikhail Roytberg, Svetlana A. Shabalina, & Alexey S. Kondrashov. (2002). OWEN: aligning long collinear regions of genomes. Bioinformatics. 18(12). 1703–1704. 49 indexed citations
20.
Roytberg, Mikhail, Aleksey Y. Ogurtsov, Svetlana A. Shabalina, & Alexey S. Kondrashov. (2002). A hierarchical approach to aligning collinear regions of genomes. Bioinformatics. 18(12). 1673–1680. 3 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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