Citation Impact
Citing Papers
RNA-Guided Human Genome Engineering via Cas9
2013 StandoutScience
A Programmable Dual-RNA–Guided DNA Endonuclease in Adaptive Bacterial Immunity
2012 StandoutScienceNobel
Systematic analysis of dynamic miRNA-target interactions during C. elegans development
2009 StandoutNobel
Evolution of a virus-like architecture and packaging mechanism in a repurposed bacterial protein
2021 Science
Automated de novo prediction of native-like RNA tertiary structures
2007 StandoutNobel
Hierarchical design of pseudosymmetric protein nanocages
2024 StandoutNatureNobel
A comprehensive comparison of comparative RNA structure prediction approaches
2004
Improved gRNA secondary structures allow editing of target sites resistant to CRISPR-Cas9 cleavage
2022 StandoutNobel
Partition function and base pairing probabilities of RNA heterodimers
2006
An accurate and interpretable model for siRNA efficacy prediction
2006
Controlling CRISPR-Cas9 with ligand-activated and ligand-deactivated sgRNAs
2019 StandoutNobel
Bridging the gap in RNA structure prediction
2007
lincRNAs: Genomics, Evolution, and Mechanisms
2013 Standout
Disease-Associated Mutations That Alter the RNA Structural Ensemble
2010
The group II intron ribonucleoprotein precursor is a large, loosely packed structure
2010 StandoutNobel
Clustering of RNA Secondary Structures with Application to Messenger RNAs
2006
Cpf1 Is a Single RNA-Guided Endonuclease of a Class 2 CRISPR-Cas System
2015 Standout
TBtools: An Integrative Toolkit Developed for Interactive Analyses of Big Biological Data
2020 Standout
Circular RNAs are a large class of animal RNAs with regulatory potency
2013 StandoutNature
SeqFold: Genome-scale reconstruction of RNA secondary structure integrating high-throughput sequencing data
2012
NNDB: the nearest neighbor parameter database for predicting stability of nucleic acid secondary structure
2009
Identification of endoribonuclease specific cleavage positions reveals novel targets of RNase III inStreptococcus pyogenes
2017 StandoutNobel
Protocols for the In Silico Design of RNA Nanostructures
2008
An RNA-seq based comparative approach reveals the transcriptome-wide interplay between 3′-to-5′ exoRNases and RNase Y
2020 StandoutNobel
Unconventional miR-122 binding stabilizes the HCV genome by forming a trimolecular RNA structure
2013 StandoutNobel
Multiplex pairwise assembly of array-derived DNA oligonucleotides
2015 StandoutNobel
ViennaRNA Package 2.0
2011 Standout
ConSurf 2016: an improved methodology to estimate and visualize evolutionary conservation in macromolecules
2016 Standout
Investigation of the recurrence patterns of gastric cancer following a curative resection
2011
Potent effect of target structure on microRNA function
2007 StandoutNobel
RNAstructure: web servers for RNA secondary structure prediction and analysis
2013
Computational approaches to 3D modeling of RNA
2010
CRISPR RNA maturation by trans-encoded small RNA and host factor RNase III
2011 StandoutNatureNobel
MicroRNAs: Target Recognition and Regulatory Functions
2009 Standout
The Tissue-Specific lncRNA Fendrr Is an Essential Regulator of Heart and Body Wall Development in the Mouse
2013
miR-122, a Mammalian Liver-Specific microRNA, is Processed from hcr mRNA and MayDownregulate the High Affinity Cationic Amino Acid Transporter CAT-1
2004
The impact of microRNAs on protein output
2008 StandoutNature
miRBase: tools for microRNA genomics
2007 Standout
The CRISPR-associated DNA-cleaving enzyme Cpf1 also processes precursor CRISPR RNA
2016 StandoutNatureNobel
Dynamical features of thePlasmodium falciparumribosome during translation
2015 StandoutNobel
VCAM-1 Promotes Osteolytic Expansion of Indolent Bone Micrometastasis of Breast Cancer by Engaging α4β1-Positive Osteoclast Progenitors
2011
Nucleic acid sequence design via efficient ensemble defect optimization
2010
RNAstructure: software for RNA secondary structure prediction and analysis
2010
Insights into RNA structure and function from genome-wide studies
2014 StandoutNobel
Emerging Biological Principles of Metastasis
2017 Standout
The impact of target site accessibility on the design of effective siRNAs
2008
The microRNA.org resource: targets and expression
2007 Standout
Adjuvant capecitabine and oxaliplatin for gastric cancer after D2 gastrectomy (CLASSIC): a phase 3 open-label, randomised controlled trial
2012 Standout
Silencing of microRNAs in vivo with ‘antagomirs’
2005 StandoutNature
Computational selection of nucleic acid biosensors via a slip structure model
2006
DNA-PKcs has KU-dependent function in rRNA processing and haematopoiesis
2020 StandoutNatureNobel
Evaluation of several lightweight stochastic context-free grammars for RNA secondary structure prediction
2004
SHAPE-directed Discovery of Potent shRNA Inhibitors of HIV-1
2012
Metastatic colonization by circulating tumour cells
2016 StandoutNature
Microenvironmental regulation of tumor progression and metastasis
2013 Standout
Refined sgRNA efficacy prediction improves large- and small-scale CRISPR–Cas9 applications
2017 StandoutNobel
Macrophage Binding to Receptor VCAM-1 Transmits Survival Signals in Breast Cancer Cells that Invade the Lungs
2011
RNA secondary structure prediction by centroids in a Boltzmann weighted ensemble
2005
N6-methyladenosine-dependent RNA structural switches regulate RNA–protein interactions
2015 StandoutNature
Hepatitis C Virus RNA Functionally Sequesters miR-122
2015 StandoutNobel
Argonaute2 complexes carry a population of circulating microRNAs independent of vesicles in human plasma
2011 Standout
Caenorhabditis elegans ALG-1 antimorphic mutations uncover functions for Argonaute in microRNA guide strand selection and passenger strand disposal
2015 StandoutNobel
Functional Nucleic Acid Sensors
2009 Standout
Modeling and automation of sequencing-based characterization of RNA structure
2011 StandoutNobel
VARNA: Interactive drawing and editing of the RNA secondary structure
2009
Multiplexed RNA structure characterization with selective 2′-hydroxyl acylation analyzed by primer extension sequencing (SHAPE-Seq)
2011 StandoutNobel
Complementary Sequence-Mediated Exon Circularization
2014 Standout
Clustering to identify RNA conformations constrained by secondary structure
2011 StandoutNobel
Modeling and design by hierarchical natural moves
2012 StandoutNobel
Macromolecular Modeling with Rosetta
2008 StandoutNobel
Modulation of Hepatitis C Virus RNA Abundance by a Liver-Specific MicroRNA
2005 StandoutScience
Cellular cofactors affecting hepatitis C virus infection and replication
2007 StandoutNobel
Comparisons between Chemical Mapping and Binding to Isoenergetic Oligonucleotide Microarrays Reveal Unexpected Patterns of Binding to the Bacillus subtilis RNase P RNA Specificity Domain
2010
Incorporating chemical modification constraints into a dynamic programming algorithm for prediction of RNA secondary structure
2004
Phylogeny of Cas9 determines functional exchangeability of dual-RNA and Cas9 among orthologous type II CRISPR-Cas systems
2013 StandoutNobel
UNAFold
2008 Standout
Silymarin/Silybin and Chronic Liver Disease: A Marriage of Many Years
2017 Standout
RNA Secondary Structure Analysis Using The RNAshapes Package
2009
Immunopurification of Ago1 miRNPs selects for a distinct class of microRNA targets
2009 StandoutNobel
Works of Y. Ding being referenced
A statistical sampling algorithm for RNA secondary structure prediction
2003
Structure clustering features on the Sfold Web server
2005
Association of VCAM-1 overexpression with oncogenesis, tumor angiogenesis and metastasis of gastric carcinoma
2003
Sfold web server for statistical folding and rational design of nucleic acids
2004
Silibinin improves palmitate-induced insulin resistance in C2C12 myotubes by attenuating IRS-1/PI3K/Akt pathway inhibition
2015