Xiaodan Fan

Predicting enhancer‐promoter interaction from genomic sequence with deep neural networks

The advantages of the Matthews correlation coefficient (MCC) over F1 score and accuracy in binary classification evaluation

Human Stem Cell Resources Are an Inroad to Neandertal DNA Functions

lincRNAs: Genomics, Evolution, and Mechanisms

Leveraging Polygenic Functional Enrichment to Improve GWAS Power

Deep Proteome Coverage Based on Ribosome Profiling Aids Mass Spectrometry-based Protein and Peptide Discovery and Provides Evidence of Alternative Translation Products and Near-cognate Translation Initiation Events*

Effective gene expression prediction from sequence by integrating long-range interactions

Global transcriptional activity dynamics reveal functional enhancer RNAs

Integrating single-cell transcriptomic data across different conditions, technologies, and species

Research progress and applications of nanobody in human infectious diseases

A Review of Feature Selection Methods for Machine Learning-Based Disease Risk Prediction

Type 2 diabetes-related genetic risk scores associated with variations in fasting plasma glucose and development of impaired glucose homeostasis in the prospective DESIR study

Comprehensive literature review and statistical considerations for microarray meta-analysis

Genome-wide polygenic scores for common diseases identify individuals with risk equivalent to monogenic mutations

Protein Expansion Is Primarily due to Indels in Intrinsically Disordered Regions

The major genetic risk factor for severe COVID-19 is inherited from Neanderthals

Revolutionizing healthcare: the role of artificial intelligence in clinical practice

Activity-by-contact model of enhancer–promoter regulation from thousands of CRISPR perturbations

eQTL Epistasis – Challenges and Computational Approaches

Local epigenomic state cannot discriminate interacting and non-interacting enhancer–promoter pairs with high accuracy

Interpreting neural networks for biological sequences by learning stochastic masks

Gene regulation by long non-coding RNAs and its biological functions

EDC-2: The Endocrine Society's Second Scientific Statement on Endocrine-Disrupting Chemicals

A survey of computational molecular science using graphics processing units

Gait Analysis Methods: An Overview of Wearable and Non-Wearable Systems, Highlighting Clinical Applications

In Vivo mRNA CAR T Cell Engineering via Targeted Ionizable Lipid Nanoparticles with Extrahepatic Tropism

Routine Microsecond Molecular Dynamics Simulations with AMBER on GPUs. 2. Explicit Solvent Particle Mesh Ewald

Second-generation PLINK: rising to the challenge of larger and richer datasets

An Efficient Chemical Reaction Optimization Algorithm for Multiobjective Optimization

Bulk wheat transportation and storage problem of public distribution system

Pleistocene North African genomes link Near Eastern and sub-Saharan African human populations

Classification of Intrinsically Disordered Regions and Proteins

MetaboAnalyst 4.0: towards more transparent and integrative metabolomics analysis

Genetic legacy of state centralization in the Kuba Kingdom of the Democratic Republic of the Congo

Grain silo location-allocation problem with dwell time for optimization of food grain supply chain network

BOOST: A Fast Approach to Detecting Gene-Gene Interactions in Genome-wide Case-Control Studies

Reconstruction of enhancer–target networks in 935 samples of human primary cells, tissues and cell lines

Use of Net Reclassification Improvement (NRI) Method Confirms The Utility of Combined Genetic Risk Score to Predict Type 2 Diabetes

Statistical power of phylo-HMM for evolutionarily conserved element detection

Selection by phage display of nanobodies directed against hypoxia inducible factor‐1α (HIF‐1α)

Bayesian meta-analysis for identifying periodically expressed genes in fission yeast cell cycle

Locomotion Mode Classification Using a Wearable Capacitive Sensing System

Short adjacent repeat identification based on Chemical Reaction Optimization